RNA–Protein interactions for RNA: ENST00000421258.1

TFRC-204, Transcript of transferrin receptor, humanhuman

TSL 3

Gene TFRC, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-204ENST00000421258 COPS6Q7L5N1 327 aa16.98■□□□□ 0.31
TFRC-204ENST00000421258 RPS12P25398 132 aaKnown RBP16.97■□□□□ 0.31
TFRC-204ENST00000421258 PLEKHF1Q96S99 279 aa16.97■□□□□ 0.31
TFRC-204ENST00000421258 TSPYL4Q9UJ04 414 aa16.97■□□□□ 0.31
TFRC-204ENST00000421258 HDAC9Q9UKV0 1011 aa16.97■□□□□ 0.31
TFRC-204ENST00000421258 PAPPA2Q9BXP8 1791 aa16.97■□□□□ 0.31
TFRC-204ENST00000421258 MKRN3Q13064 507 aaKnown RBP16.96■□□□□ 0.31
TFRC-204ENST00000421258 NFE2L2Q16236 605 aa16.96■□□□□ 0.31
TFRC-204ENST00000421258 RTL5Q5HYW3 569 aaPredicted RBP16.96■□□□□ 0.31
TFRC-204ENST00000421258 PRAMEF18Q5VWM3 479 aa16.96■□□□□ 0.31
TFRC-204ENST00000421258 CCER1Q8TC90 406 aaPredicted RBP16.96■□□□□ 0.31
TFRC-204ENST00000421258 TCIRG1Q13488 830 aa16.95■□□□□ 0.3
TFRC-204ENST00000421258 SCARF1Q14162 830 aa16.95■□□□□ 0.3
TFRC-204ENST00000421258 KRT24Q2M2I5 525 aa16.95■□□□□ 0.3
TFRC-204ENST00000421258 TBC1D16Q8TBP0 767 aa16.95■□□□□ 0.3
TFRC-204ENST00000421258 FAM89AQ96GI7 184 aa16.95■□□□□ 0.3
TFRC-204ENST00000421258 R3HDMLQ9H3Y0 253 aa16.95■□□□□ 0.3
TFRC-204ENST00000421258 SZT2Q5T011 3432 aa16.95■□□□□ 0.3
TFRC-204ENST00000421258 UBE2Q2LH0YL09 131 aa16.94■□□□□ 0.3
TFRC-204ENST00000421258 TMC4Q7Z404 712 aa16.94■□□□□ 0.3
TFRC-204ENST00000421258 VIL1P09327 827 aaKnown RBP16.93■□□□□ 0.3
TFRC-204ENST00000421258 HSP90AB3PQ58FF7 597 aa16.93■□□□□ 0.3
TFRC-204ENST00000421258 HABP4Q5JVS0 413 aaKnown RBP16.93■□□□□ 0.3
TFRC-204ENST00000421258 ATP5J2-PTCD1G3V325 749 aa16.92■□□□□ 0.3
TFRC-204ENST00000421258 ZNF280AP59817 542 aaPredicted RBP16.92■□□□□ 0.3
TFRC-204ENST00000421258 GPR25O00155 361 aa16.91■□□□□ 0.3
TFRC-204ENST00000421258 UFL1O94874 794 aa16.91■□□□□ 0.3
TFRC-204ENST00000421258 PKN2Q16513 984 aaKnown RBP16.91■□□□□ 0.3
TFRC-204ENST00000421258 NEFMP07197 916 aa16.9■□□□□ 0.3
TFRC-204ENST00000421258 SF3B3Q15393 1217 aaKnown RBP16.9■□□□□ 0.3
TFRC-204ENST00000421258 RSBN1LQ6PCB5 846 aaPredicted RBP16.9■□□□□ 0.3
TFRC-204ENST00000421258 FBXO46Q6PJ61 603 aaPredicted RBP16.9■□□□□ 0.3
TFRC-204ENST00000421258 EYA3Q99504 573 aa16.9■□□□□ 0.3
TFRC-204ENST00000421258 SEC31BQ9NQW1 1179 aa16.9■□□□□ 0.3
TFRC-204ENST00000421258 POTEFA5A3E0 1075 aa16.89■□□□□ 0.29
TFRC-204ENST00000421258 REM2Q8IYK8 340 aaPredicted RBP16.89■□□□□ 0.29
TFRC-204ENST00000421258 ZC3H12CQ9C0D7 883 aaKnown RBP16.89■□□□□ 0.29
TFRC-204ENST00000421258 MYOZ2Q9NPC6 264 aa16.89■□□□□ 0.29
TFRC-204ENST00000421258 CHPF2Q9P2E5 772 aa16.89■□□□□ 0.29
TFRC-204ENST00000421258 WTIPA6NIX2 430 aaPredicted RBP16.88■□□□□ 0.29
TFRC-204ENST00000421258 FKBP1BP68106 108 aa16.88■□□□□ 0.29
TFRC-204ENST00000421258 TTLL12Q14166 644 aaPredicted RBP16.88■□□□□ 0.29
TFRC-204ENST00000421258 NBPF9Q3BBW0 867 aa16.88■□□□□ 0.29
TFRC-204ENST00000421258 GMLQ99445 158 aa16.88■□□□□ 0.29
TFRC-204ENST00000421258 ISCA1Q9BUE6 129 aa16.88■□□□□ 0.29
TFRC-204ENST00000421258 MXD3Q9BW11 206 aa16.88■□□□□ 0.29
TFRC-204ENST00000421258 ZNF609O15014 1411 aa16.87■□□□□ 0.29
TFRC-204ENST00000421258 PSME4Q14997 1843 aa16.87■□□□□ 0.29
TFRC-204ENST00000421258 RPS8P62241 208 aaKnown RBP16.87■□□□□ 0.29
TFRC-204ENST00000421258 FZD1Q9UP38 647 aa16.87■□□□□ 0.29
TFRC-204ENST00000421258 MAPK8IP3Q9UPT6 1336 aa16.87■□□□□ 0.29
TFRC-204ENST00000421258 IRS4O14654 1257 aaPredicted RBP16.86■□□□□ 0.29
TFRC-204ENST00000421258 USP17L8P0C7I0 530 aa16.86■□□□□ 0.29
TFRC-204ENST00000421258 TM4SF4P48230 202 aa16.86■□□□□ 0.29
TFRC-204ENST00000421258 PRKG1Q13976 671 aa16.86■□□□□ 0.29
TFRC-204ENST00000421258 AGBL3Q8NEM8 1001 aa16.86■□□□□ 0.29
TFRC-204ENST00000421258 GCC1Q96CN9 775 aa16.86■□□□□ 0.29
TFRC-204ENST00000421258 CCDC85AQ96PX6 553 aaPredicted RBP16.86■□□□□ 0.29
TFRC-204ENST00000421258 ANKIB1Q9P2G1 1089 aa16.86■□□□□ 0.29
TFRC-204ENST00000421258 G3V3G9 751 aa16.85■□□□□ 0.29
TFRC-204ENST00000421258 FKTNO75072 461 aa16.85■□□□□ 0.29
TFRC-204ENST00000421258 DCAF8Q5TAQ9 597 aa16.85■□□□□ 0.29
TFRC-204ENST00000421258 PODXL2Q9NZ53 605 aa16.85■□□□□ 0.29
TFRC-204ENST00000421258 GGA1Q9UJY5 639 aa16.85■□□□□ 0.29
TFRC-204ENST00000421258 RANBP2P49792 3224 aaKnown RBP16.85■□□□□ 0.29
TFRC-204ENST00000421258 PITPNM2Q9BZ72 1349 aa16.85■□□□□ 0.29
TFRC-204ENST00000421258 FXR1P51114 621 aaKnown RBP eCLIP16.84■□□□□ 0.29
TFRC-204ENST00000421258 RIPK4P57078 832 aa16.84■□□□□ 0.29
TFRC-204ENST00000421258 PTPN12Q05209 780 aaKnown RBP16.84■□□□□ 0.29
TFRC-204ENST00000421258 PLBD2Q8NHP8 589 aa16.84■□□□□ 0.29
TFRC-204ENST00000421258 JARID2Q92833 1246 aaPredicted RBP16.84■□□□□ 0.29
TFRC-204ENST00000421258 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.84■□□□□ 0.29
TFRC-204ENST00000421258 ZNF646O15015 1829 aaPredicted RBP16.84■□□□□ 0.29
TFRC-204ENST00000421258 SASH1O94885 1247 aa16.83■□□□□ 0.28
TFRC-204ENST00000421258 TRIM17Q9Y577 477 aa16.83■□□□□ 0.28
TFRC-204ENST00000421258 KIAA0100Q14667 2235 aaKnown RBP16.82■□□□□ 0.28
TFRC-204ENST00000421258 NOM1Q5C9Z4 860 aaKnown RBP16.82■□□□□ 0.28
TFRC-204ENST00000421258 ANKRD13DQ6ZTN6 518 aa16.82■□□□□ 0.28
TFRC-204ENST00000421258 USP17L3A6NCW0 530 aa16.81■□□□□ 0.28
TFRC-204ENST00000421258 USP17L4A6NCW7 530 aa16.81■□□□□ 0.28
TFRC-204ENST00000421258 HDGFL1Q5TGJ6 251 aa16.81■□□□□ 0.28
TFRC-204ENST00000421258 OTOP1Q7RTM1 612 aa16.81■□□□□ 0.28
TFRC-204ENST00000421258 USP17L1Q7RTZ2 530 aa16.81■□□□□ 0.28
TFRC-204ENST00000421258 WNT10BO00744 389 aa16.8■□□□□ 0.28
TFRC-204ENST00000421258 CAP1Q01518 475 aa16.8■□□□□ 0.28
TFRC-204ENST00000421258 SREBF2Q12772 1141 aa16.8■□□□□ 0.28
TFRC-204ENST00000421258 CFHR5Q9BXR6 569 aa16.8■□□□□ 0.28
TFRC-204ENST00000421258 CEP290O15078 2479 aa16.8■□□□□ 0.28
TFRC-204ENST00000421258 TRIOBPQ9H2D6 2365 aa16.79■□□□□ 0.28
TFRC-204ENST00000421258 EN2P19622 333 aaPredicted RBP16.79■□□□□ 0.28
TFRC-204ENST00000421258 SPRYD7Q5W111 196 aa16.79■□□□□ 0.28
TFRC-204ENST00000421258 FBXW7Q969H0 707 aa16.79■□□□□ 0.28
TFRC-204ENST00000421258 LAS1LQ9Y4W2 734 aaKnown RBP16.79■□□□□ 0.28
TFRC-204ENST00000421258 XDHP47989 1333 aa16.78■□□□□ 0.28
TFRC-204ENST00000421258 SSC5DA1L4H1 1573 aa16.78■□□□□ 0.28
TFRC-204ENST00000421258 IGF2BP3O00425 579 aaKnown RBP eCLIP16.78■□□□□ 0.28
TFRC-204ENST00000421258 TMPOP42166 694 aaKnown RBP16.78■□□□□ 0.28
TFRC-204ENST00000421258 DACT2Q5SW24 774 aa16.78■□□□□ 0.28
TFRC-204ENST00000421258 CLMNQ96JQ2 1002 aa16.78■□□□□ 0.28
TFRC-204ENST00000421258 BABAM1Q9NWV8 329 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms