RNA–Protein interactions for RNA: ENST00000418897.5

DDX39B-204, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-204ENST00000418897 BRCA2P51587 3418 aa15.94■□□□□ 0.14
DDX39B-204ENST00000418897 PRAMEF18Q5VWM3 479 aa15.94■□□□□ 0.14
DDX39B-204ENST00000418897 DDX46Q7L014 1031 aaKnown RBP15.94■□□□□ 0.14
DDX39B-204ENST00000418897 ZNF333Q96JL9 665 aa15.94■□□□□ 0.14
DDX39B-204ENST00000418897 RSPH6AQ9H0K4 717 aa15.94■□□□□ 0.14
DDX39B-204ENST00000418897 POLLQ9UGP5 575 aa15.94■□□□□ 0.14
DDX39B-204ENST00000418897 TAF1P21675 1872 aa15.94■□□□□ 0.14
DDX39B-204ENST00000418897 PAPPA2Q9BXP8 1791 aa15.93■□□□□ 0.14
DDX39B-204ENST00000418897 PER1O15534 1290 aaPredicted RBP15.93■□□□□ 0.14
DDX39B-204ENST00000418897 GRAPQ13588 217 aa15.93■□□□□ 0.14
DDX39B-204ENST00000418897 ARHGEF6Q15052 776 aa15.93■□□□□ 0.14
DDX39B-204ENST00000418897 TAF7Q15545 349 aaPredicted RBP15.93■□□□□ 0.14
DDX39B-204ENST00000418897 PARP10Q53GL7 1025 aa15.93■□□□□ 0.14
DDX39B-204ENST00000418897 CC2D1BQ5T0F9 858 aaKnown RBP15.93■□□□□ 0.14
DDX39B-204ENST00000418897 TMC4Q7Z404 712 aa15.93■□□□□ 0.14
DDX39B-204ENST00000418897 GRAPLQ8TC17 118 aaPredicted RBP15.93■□□□□ 0.14
DDX39B-204ENST00000418897 CD99L2Q8TCZ2 262 aa15.93■□□□□ 0.14
DDX39B-204ENST00000418897 COL25A1Q9BXS0 654 aaPredicted RBP15.93■□□□□ 0.14
DDX39B-204ENST00000418897 RANBP2P49792 3224 aaKnown RBP15.93■□□□□ 0.14
DDX39B-204ENST00000418897 MANSC4A6NHS7 340 aaPredicted RBP15.92■□□□□ 0.14
DDX39B-204ENST00000418897 VIL1P09327 827 aaKnown RBP15.92■□□□□ 0.14
DDX39B-204ENST00000418897 SLC9C1Q4G0N8 1177 aa15.92■□□□□ 0.14
DDX39B-204ENST00000418897 IFNL1Q8IU54 200 aa15.92■□□□□ 0.14
DDX39B-204ENST00000418897 RTF1Q92541 710 aaKnown RBP15.92■□□□□ 0.14
DDX39B-204ENST00000418897 NECTIN2Q92692 538 aa15.92■□□□□ 0.14
DDX39B-204ENST00000418897 A0A1W2PPC1 479 aa15.91■□□□□ 0.14
DDX39B-204ENST00000418897 C6orf229H3BNL8 230 aa15.91■□□□□ 0.14
DDX39B-204ENST00000418897 ECE2O60344 883 aa15.91■□□□□ 0.14
DDX39B-204ENST00000418897 EIF4G2P78344 907 aaKnown RBP eCLIP15.91■□□□□ 0.14
DDX39B-204ENST00000418897 ARMC9Q7Z3E5 817 aa15.91■□□□□ 0.14
DDX39B-204ENST00000418897 EYA3Q99504 573 aa15.91■□□□□ 0.14
DDX39B-204ENST00000418897 NSFL1CQ9UNZ2 370 aaKnown RBP15.91■□□□□ 0.14
DDX39B-204ENST00000418897 G3V3G9 751 aa15.9■□□□□ 0.14
DDX39B-204ENST00000418897 ZNF280AP59817 542 aaPredicted RBP15.9■□□□□ 0.14
DDX39B-204ENST00000418897 GPSM2P81274 684 aa15.9■□□□□ 0.14
DDX39B-204ENST00000418897 SP3Q02447 781 aa15.9■□□□□ 0.14
DDX39B-204ENST00000418897 DCAF8Q5TAQ9 597 aa15.9■□□□□ 0.14
DDX39B-204ENST00000418897 SPRYD7Q5W111 196 aa15.9■□□□□ 0.14
DDX39B-204ENST00000418897 OTUD7BQ6GQQ9 843 aa15.9■□□□□ 0.14
DDX39B-204ENST00000418897 NR2E3Q9Y5X4 410 aa15.9■□□□□ 0.14
DDX39B-204ENST00000418897 PTPN12Q05209 780 aaKnown RBP15.89■□□□□ 0.13
DDX39B-204ENST00000418897 LRP10Q7Z4F1 713 aa15.89■□□□□ 0.13
DDX39B-204ENST00000418897 THUMPD2Q9BTF0 503 aaKnown RBP15.89■□□□□ 0.13
DDX39B-204ENST00000418897 PRO3102Q9H379 93 aa15.89■□□□□ 0.13
DDX39B-204ENST00000418897 RBBP6Q7Z6E9 1792 aaKnown RBP15.89■□□□□ 0.13
DDX39B-204ENST00000418897 LAMB2P55268 1798 aa15.88■□□□□ 0.13
DDX39B-204ENST00000418897 EIF4A1P60842 406 aaKnown RBP15.88■□□□□ 0.13
DDX39B-204ENST00000418897 AGBL3Q8NEM8 1001 aa15.88■□□□□ 0.13
DDX39B-204ENST00000418897 HTATIP2Q9BUP3 242 aa15.88■□□□□ 0.13
DDX39B-204ENST00000418897 MYOZ2Q9NPC6 264 aa15.88■□□□□ 0.13
DDX39B-204ENST00000418897 WTIPA6NIX2 430 aaPredicted RBP15.87■□□□□ 0.13
DDX39B-204ENST00000418897 MYCP01106 439 aaPredicted RBP15.87■□□□□ 0.13
DDX39B-204ENST00000418897 CAP1Q01518 475 aa15.87■□□□□ 0.13
DDX39B-204ENST00000418897 CNGB1Q14028 1251 aaPredicted RBP15.87■□□□□ 0.13
DDX39B-204ENST00000418897 CELF1Q92879 486 aaKnown RBP15.87■□□□□ 0.13
DDX39B-204ENST00000418897 ZNF428Q96B54 188 aa15.87■□□□□ 0.13
DDX39B-204ENST00000418897 SLC10A4Q96EP9 437 aa15.87■□□□□ 0.13
DDX39B-204ENST00000418897 ZC3H12CQ9C0D7 883 aaKnown RBP15.87■□□□□ 0.13
DDX39B-204ENST00000418897 STXBP5LQ9Y2K9 1186 aa15.87■□□□□ 0.13
DDX39B-204ENST00000418897 SCN9AQ15858 1988 aa15.87■□□□□ 0.13
DDX39B-204ENST00000418897 ANKRD36CQ5JPF3 1778 aa15.86■□□□□ 0.13
DDX39B-204ENST00000418897 HTATSF1O43719 755 aaKnown RBP15.86■□□□□ 0.13
DDX39B-204ENST00000418897 USP17L8P0C7I0 530 aa15.86■□□□□ 0.13
DDX39B-204ENST00000418897 PDIA6Q15084 440 aa15.86■□□□□ 0.13
DDX39B-204ENST00000418897 NLRP10Q86W26 655 aa15.86■□□□□ 0.13
DDX39B-204ENST00000418897 TBC1D16Q8TBP0 767 aa15.86■□□□□ 0.13
DDX39B-204ENST00000418897 LRCH3Q96II8 777 aa15.86■□□□□ 0.13
DDX39B-204ENST00000418897 GMLQ99445 158 aa15.86■□□□□ 0.13
DDX39B-204ENST00000418897 PRKG1Q13976 671 aa15.85■□□□□ 0.13
DDX39B-204ENST00000418897 GPR153Q6NV75 609 aa15.85■□□□□ 0.13
DDX39B-204ENST00000418897 RSBN1LQ6PCB5 846 aaPredicted RBP15.85■□□□□ 0.13
DDX39B-204ENST00000418897 COL4A1P02462 1669 aa15.85■□□□□ 0.13
DDX39B-204ENST00000418897 LAMB4A4D0S4 1761 aa15.85■□□□□ 0.13
DDX39B-204ENST00000418897 ZNF609O15014 1411 aa15.85■□□□□ 0.13
DDX39B-204ENST00000418897 SOX1O00570 391 aaPredicted RBP15.84■□□□□ 0.13
DDX39B-204ENST00000418897 ANXA1P04083 346 aa15.84■□□□□ 0.13
DDX39B-204ENST00000418897 PROSER3Q2NL68 480 aa15.84■□□□□ 0.13
DDX39B-204ENST00000418897 LDLRAD1Q5T700 205 aa15.84■□□□□ 0.13
DDX39B-204ENST00000418897 DEFB123Q8N688 67 aa15.84■□□□□ 0.13
DDX39B-204ENST00000418897 PRDM6Q9NQX0 595 aa15.84■□□□□ 0.13
DDX39B-204ENST00000418897 TRMT112Q9UI30 125 aaKnown RBP15.84■□□□□ 0.13
DDX39B-204ENST00000418897 TIMELESSQ9UNS1 1208 aa15.84■□□□□ 0.13
DDX39B-204ENST00000418897 PTCH2Q9Y6C5 1203 aa15.84■□□□□ 0.13
DDX39B-204ENST00000418897 LRRC37AA6NMS7 1700 aa15.83■□□□□ 0.13
DDX39B-204ENST00000418897 IGF2BP3O00425 579 aaKnown RBP eCLIP15.83■□□□□ 0.12
DDX39B-204ENST00000418897 ZBTB48P10074 688 aaPredicted RBP15.83■□□□□ 0.12
DDX39B-204ENST00000418897 CRHR2Q13324 411 aa15.83■□□□□ 0.12
DDX39B-204ENST00000418897 NBPF9Q3BBW0 867 aa15.83■□□□□ 0.12
DDX39B-204ENST00000418897 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.83■□□□□ 0.12
DDX39B-204ENST00000418897 NKX2-3Q8TAU0 364 aa15.82■□□□□ 0.12
DDX39B-204ENST00000418897 ANGEL1Q9UNK9 670 aaKnown RBP15.82■□□□□ 0.12
DDX39B-204ENST00000418897 SH3TC1Q8TE82 1336 aa15.82■□□□□ 0.12
DDX39B-204ENST00000418897 UNC80Q8N2C7 3258 aa15.82■□□□□ 0.12
DDX39B-204ENST00000418897 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.81■□□□□ 0.12
DDX39B-204ENST00000418897 FZD1Q9UP38 647 aa15.81■□□□□ 0.12
DDX39B-204ENST00000418897 ZBTB7BO15156 539 aaPredicted RBP15.8■□□□□ 0.12
DDX39B-204ENST00000418897 U2AF1L5P0DN76 240 aaPredicted RBP15.8■□□□□ 0.12
DDX39B-204ENST00000418897 U2AF1Q01081 240 aaKnown RBP eCLIP15.8■□□□□ 0.124e-14■□□□□ 8.9
DDX39B-204ENST00000418897 SF3B3Q15393 1217 aaKnown RBP15.8■□□□□ 0.12
DDX39B-204ENST00000418897 PNISRQ8TF01 805 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms