RNA–Protein interactions for RNA: ENST00000416774.1

LINC01342-201, Transcript of long intergenic non-protein coding RNA 1342, humanhuman

TSL 1 (best) BASIC

Gene LINC01342, Length 1,620 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01342-201ENST00000416774 NEUROD6Q96NK8 337 aa28.46■■■□□ 2.15
LINC01342-201ENST00000416774 PDGFDQ9GZP0 370 aaPredicted RBP28.46■■■□□ 2.15
LINC01342-201ENST00000416774 A0A1B0GUL7 405 aa28.45■■■□□ 2.14
LINC01342-201ENST00000416774 ITGA6P23229 1130 aa28.45■■■□□ 2.14
LINC01342-201ENST00000416774 NMIQ13287 307 aaPredicted RBP28.45■■■□□ 2.14
LINC01342-201ENST00000416774 KCNB2Q92953 911 aa28.45■■■□□ 2.14
LINC01342-201ENST00000416774 SUSD4Q5VX71 490 aa28.44■■■□□ 2.14
LINC01342-201ENST00000416774 SYNE4Q8N205 404 aa28.44■■■□□ 2.14
LINC01342-201ENST00000416774 RIPOR2Q9Y4F9 1068 aa28.44■■■□□ 2.14
LINC01342-201ENST00000416774 NEK4P51957 841 aa28.43■■■□□ 2.14
LINC01342-201ENST00000416774 GREM2Q9H772 168 aa28.43■■■□□ 2.14
LINC01342-201ENST00000416774 PNPLA7Q6ZV29 1317 aa28.43■■■□□ 2.14
LINC01342-201ENST00000416774 GNPATO15228 680 aa28.43■■■□□ 2.14
LINC01342-201ENST00000416774 TIMM10P62072 90 aa28.43■■■□□ 2.14
LINC01342-201ENST00000416774 CCDC171Q6TFL3 1326 aa28.43■■■□□ 2.14
LINC01342-201ENST00000416774 ABCC12Q96J65 1359 aa28.43■■■□□ 2.14
LINC01342-201ENST00000416774 MED23Q9ULK4 1368 aa28.43■■■□□ 2.14
LINC01342-201ENST00000416774 LRP5O75197 1615 aa28.42■■■□□ 2.14
LINC01342-201ENST00000416774 SMIM5Q71RC9 77 aa28.42■■■□□ 2.14
LINC01342-201ENST00000416774 RTL9Q8NET4 1388 aa28.42■■■□□ 2.14
LINC01342-201ENST00000416774 AMIGO3Q86WK7 504 aa28.41■■■□□ 2.14
LINC01342-201ENST00000416774 KBTBD3Q8NAB2 608 aa28.41■■■□□ 2.14
LINC01342-201ENST00000416774 CWC22Q9HCG8 908 aaKnown RBP28.41■■■□□ 2.14
LINC01342-201ENST00000416774 DDX60Q8IY21 1712 aaKnown RBP28.41■■■□□ 2.14
LINC01342-201ENST00000416774 PHF14O94880 888 aa28.4■■■□□ 2.14
LINC01342-201ENST00000416774 CCDC158Q5M9N0 1113 aa28.4■■■□□ 2.14
LINC01342-201ENST00000416774 LDHAL6AQ6ZMR3 332 aa28.4■■■□□ 2.14
LINC01342-201ENST00000416774 MAP4K1Q92918 833 aa28.4■■■□□ 2.14
LINC01342-201ENST00000416774 SNX14Q9Y5W7 946 aa28.4■■■□□ 2.14
LINC01342-201ENST00000416774 RIC1Q4ADV7 1423 aa28.4■■■□□ 2.14
LINC01342-201ENST00000416774 FRAT2O75474 233 aaPredicted RBP28.4■■■□□ 2.14
LINC01342-201ENST00000416774 FAM227BQ96M60 508 aa28.4■■■□□ 2.14
LINC01342-201ENST00000416774 NIP7Q9Y221 180 aaKnown RBP eCLIP28.4■■■□□ 2.14
LINC01342-201ENST00000416774 SCN7AQ01118 1682 aa28.39■■■□□ 2.14
LINC01342-201ENST00000416774 NTSR2O95665 410 aa28.39■■■□□ 2.13
LINC01342-201ENST00000416774 COL23A1Q86Y22 540 aaPredicted RBP28.39■■■□□ 2.13
LINC01342-201ENST00000416774 TM6SF1Q9BZW5 370 aa28.39■■■□□ 2.13
LINC01342-201ENST00000416774 A0A0D9SFI3 127 aa28.38■■■□□ 2.13
LINC01342-201ENST00000416774 RPS6KA4O75676 772 aa28.38■■■□□ 2.13
LINC01342-201ENST00000416774 PTH1RQ03431 593 aa28.38■■■□□ 2.13
LINC01342-201ENST00000416774 DNAJC2Q99543 621 aaKnown RBP28.38■■■□□ 2.13
LINC01342-201ENST00000416774 PAG1Q9NWQ8 432 aa28.38■■■□□ 2.13
LINC01342-201ENST00000416774 RTCBQ9Y3I0 505 aaKnown RBP28.38■■■□□ 2.13
LINC01342-201ENST00000416774 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.37■■■□□ 2.13
LINC01342-201ENST00000416774 IFIT1P09914 478 aaKnown RBP28.37■■■□□ 2.13
LINC01342-201ENST00000416774 NECTIN1Q15223 517 aa28.37■■■□□ 2.13
LINC01342-201ENST00000416774 METTL24Q5JXM2 366 aa28.37■■■□□ 2.13
LINC01342-201ENST00000416774 FLAD1Q8NFF5 587 aa28.37■■■□□ 2.13
LINC01342-201ENST00000416774 CCDC85AQ96PX6 553 aaPredicted RBP28.37■■■□□ 2.13
LINC01342-201ENST00000416774 CNNM1Q9NRU3 951 aa28.37■■■□□ 2.13
LINC01342-201ENST00000416774 CASZ1Q86V15 1759 aa28.37■■■□□ 2.13
LINC01342-201ENST00000416774 QSER1Q2KHR3 1735 aa28.37■■■□□ 2.13
LINC01342-201ENST00000416774 SSFA2P28290 1259 aa28.36■■■□□ 2.13
LINC01342-201ENST00000416774 XAGE2Q96GT9 111 aa28.36■■■□□ 2.13
LINC01342-201ENST00000416774 MROH5Q6ZUA9 1318 aa28.36■■■□□ 2.13
LINC01342-201ENST00000416774 ZBTB7AO95365 584 aa28.36■■■□□ 2.13
LINC01342-201ENST00000416774 LRRFIP1Q32MZ4 808 aaKnown RBP28.36■■■□□ 2.13
LINC01342-201ENST00000416774 ZNF512BQ96KM6 892 aaPredicted RBP28.36■■■□□ 2.13
LINC01342-201ENST00000416774 ATP2B3Q16720 1220 aa28.35■■■□□ 2.13
LINC01342-201ENST00000416774 CCDC152Q4G0S7 254 aa28.35■■■□□ 2.13
LINC01342-201ENST00000416774 VGLL2Q8N8G2 317 aa28.35■■■□□ 2.13
LINC01342-201ENST00000416774 EDC3Q96F86 508 aaKnown RBP28.35■■■□□ 2.13
LINC01342-201ENST00000416774 UBR3Q6ZT12 1888 aa28.35■■■□□ 2.13
LINC01342-201ENST00000416774 RAB3GAP1Q15042 981 aa28.34■■■□□ 2.13
LINC01342-201ENST00000416774 GORABQ5T7V8 394 aa28.34■■■□□ 2.13
LINC01342-201ENST00000416774 HELLSQ9NRZ9 838 aa28.34■■■□□ 2.13
LINC01342-201ENST00000416774 RBM8AQ9Y5S9 174 aaKnown RBP28.34■■■□□ 2.13
LINC01342-201ENST00000416774 ZKSCAN1P17029 563 aaPredicted RBP28.33■■■□□ 2.13
LINC01342-201ENST00000416774 CUL4AQ13619 759 aa28.33■■■□□ 2.13
LINC01342-201ENST00000416774 MCMDC2Q4G0Z9 681 aa28.33■■■□□ 2.13
LINC01342-201ENST00000416774 TTC39AQ5SRH9 613 aa28.33■■■□□ 2.13
LINC01342-201ENST00000416774 RNF20Q5VTR2 975 aa28.33■■■□□ 2.13
LINC01342-201ENST00000416774 RASEFQ8IZ41 740 aa28.33■■■□□ 2.13
LINC01342-201ENST00000416774 NARFQ9UHQ1 456 aa28.33■■■□□ 2.13
LINC01342-201ENST00000416774 PDE8BO95263 885 aa28.32■■■□□ 2.12
LINC01342-201ENST00000416774 TRAPPC3LQ5T215 181 aa28.32■■■□□ 2.12
LINC01342-201ENST00000416774 HMG20BQ9P0W2 317 aa28.32■■■□□ 2.12
LINC01342-201ENST00000416774 ARAP2Q8WZ64 1704 aa28.32■■■□□ 2.12
LINC01342-201ENST00000416774 DDX46Q7L014 1031 aaKnown RBP28.32■■■□□ 2.12
LINC01342-201ENST00000416774 INTS4Q96HW7 963 aaKnown RBP28.32■■■□□ 2.12
LINC01342-201ENST00000416774 TMX3Q96JJ7 454 aa28.32■■■□□ 2.12
LINC01342-201ENST00000416774 GOLIM4O00461 696 aa28.31■■■□□ 2.12
LINC01342-201ENST00000416774 TAF5LO75529 589 aa28.31■■■□□ 2.12
LINC01342-201ENST00000416774 HCLS1P14317 486 aaPredicted RBP28.31■■■□□ 2.12
LINC01342-201ENST00000416774 NUCB2P80303 420 aa28.31■■■□□ 2.12
LINC01342-201ENST00000416774 TSGA10IPQ3SY00 556 aa28.31■■■□□ 2.12
LINC01342-201ENST00000416774 USPL1Q5W0Q7 1092 aa28.31■■■□□ 2.12
LINC01342-201ENST00000416774 PRPF40BQ6NWY9 871 aaKnown RBP28.31■■■□□ 2.12
LINC01342-201ENST00000416774 ATF5Q9Y2D1 282 aaPredicted RBP28.31■■■□□ 2.12
LINC01342-201ENST00000416774 CREB3L3Q68CJ9 461 aa28.3■■■□□ 2.12
LINC01342-201ENST00000416774 SLC16A10Q8TF71 515 aa28.3■■■□□ 2.12
LINC01342-201ENST00000416774 ARHGEF1Q92888 912 aaKnown RBP28.3■■■□□ 2.12
LINC01342-201ENST00000416774 TTC14Q96N46 770 aa28.3■■■□□ 2.12
LINC01342-201ENST00000416774 ADRA2BP18089 450 aa28.29■■■□□ 2.12
LINC01342-201ENST00000416774 KCNJ4P48050 445 aa28.29■■■□□ 2.12
LINC01342-201ENST00000416774 MTFR1LQ9H019 292 aa28.29■■■□□ 2.12
LINC01342-201ENST00000416774 PSMA5P28066 241 aa28.29■■■□□ 2.12
LINC01342-201ENST00000416774 ADORA1P30542 326 aa28.29■■■□□ 2.12
LINC01342-201ENST00000416774 ZMYM1Q5SVZ6 1142 aa28.29■■■□□ 2.12
LINC01342-201ENST00000416774 UPF3BQ9BZI7 483 aaKnown RBP28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms