RNA–Protein interactions for RNA: ENST00000414142.5

SNHG17-202, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,102 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-202ENST00000414142 ZNF589Q86UQ0 364 aaPredicted RBP16.48■□□□□ 0.23
SNHG17-202ENST00000414142 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.48■□□□□ 0.23
SNHG17-202ENST00000414142 ATRNO75882 1429 aa16.48■□□□□ 0.23
SNHG17-202ENST00000414142 BCORQ6W2J9 1755 aa16.47■□□□□ 0.23
SNHG17-202ENST00000414142 RIC1Q4ADV7 1423 aa16.47■□□□□ 0.23
SNHG17-202ENST00000414142 ONECUT3O60422 494 aaPredicted RBP16.47■□□□□ 0.23
SNHG17-202ENST00000414142 FKBP4Q02790 459 aaKnown RBP eCLIP16.47■□□□□ 0.23
SNHG17-202ENST00000414142 CCDC152Q4G0S7 254 aa16.47■□□□□ 0.23
SNHG17-202ENST00000414142 CWC22Q9HCG8 908 aaKnown RBP16.47■□□□□ 0.23
SNHG17-202ENST00000414142 RPS6KA4O75676 772 aa16.46■□□□□ 0.23
SNHG17-202ENST00000414142 RAB3GAP1Q15042 981 aa16.46■□□□□ 0.23
SNHG17-202ENST00000414142 MCMDC2Q4G0Z9 681 aa16.46■□□□□ 0.23
SNHG17-202ENST00000414142 CREB3L3Q68CJ9 461 aa16.46■□□□□ 0.23
SNHG17-202ENST00000414142 SMIM5Q71RC9 77 aa16.46■□□□□ 0.23
SNHG17-202ENST00000414142 QTRT2Q9H974 415 aaKnown RBP16.46■□□□□ 0.23
SNHG17-202ENST00000414142 TAF5LO75529 589 aa16.46■□□□□ 0.23
SNHG17-202ENST00000414142 CASTP20810 708 aaKnown RBP16.46■□□□□ 0.23
SNHG17-202ENST00000414142 KCNB2Q92953 911 aa16.46■□□□□ 0.23
SNHG17-202ENST00000414142 TNPO1Q92973 898 aaKnown RBP16.46■□□□□ 0.23
SNHG17-202ENST00000414142 JAKMIP1Q96N16 626 aaKnown RBP16.46■□□□□ 0.23
SNHG17-202ENST00000414142 DDX11L8A8MPP1 907 aa16.45■□□□□ 0.22
SNHG17-202ENST00000414142 GNPATO15228 680 aa16.45■□□□□ 0.22
SNHG17-202ENST00000414142 PDE8BO95263 885 aa16.45■□□□□ 0.22
SNHG17-202ENST00000414142 CHGBP05060 677 aa16.45■□□□□ 0.22
SNHG17-202ENST00000414142 RNF20Q5VTR2 975 aa16.45■□□□□ 0.22
SNHG17-202ENST00000414142 BICDL1Q6ZP65 573 aa16.45■□□□□ 0.22
SNHG17-202ENST00000414142 ZGPATQ8N5A5 531 aaKnown RBP16.45■□□□□ 0.22
SNHG17-202ENST00000414142 SEC62Q99442 399 aaKnown RBP16.45■□□□□ 0.22
SNHG17-202ENST00000414142 MPHOSPH8Q99549 860 aa16.45■□□□□ 0.22
SNHG17-202ENST00000414142 SEC31BQ9NQW1 1179 aa16.45■□□□□ 0.22
SNHG17-202ENST00000414142 DDX60Q8IY21 1712 aaKnown RBP16.45■□□□□ 0.22
SNHG17-202ENST00000414142 SBF2Q86WG5 1849 aa16.45■□□□□ 0.22
SNHG17-202ENST00000414142 CCDC129Q6ZRS4 1044 aa16.45■□□□□ 0.22
SNHG17-202ENST00000414142 TICAM2Q86XR7 235 aa16.45■□□□□ 0.22
SNHG17-202ENST00000414142 MROH5Q6ZUA9 1318 aa16.44■□□□□ 0.22
SNHG17-202ENST00000414142 SPEF2Q9C093 1822 aa16.44■□□□□ 0.22
SNHG17-202ENST00000414142 SLC27A2O14975 620 aa16.44■□□□□ 0.22
SNHG17-202ENST00000414142 ADCK5Q3MIX3 580 aa16.44■□□□□ 0.22
SNHG17-202ENST00000414142 VGLL2Q8N8G2 317 aa16.44■□□□□ 0.22
SNHG17-202ENST00000414142 HELBQ8NG08 1087 aaPredicted RBP16.44■□□□□ 0.22
SNHG17-202ENST00000414142 RTCBQ9Y3I0 505 aaKnown RBP16.44■□□□□ 0.22
SNHG17-202ENST00000414142 ZPR1O75312 459 aa16.43■□□□□ 0.22
SNHG17-202ENST00000414142 IGHMBP2P38935 993 aaKnown RBP16.43■□□□□ 0.22
SNHG17-202ENST00000414142 USPL1Q5W0Q7 1092 aa16.43■□□□□ 0.22
SNHG17-202ENST00000414142 GBP4Q96PP9 640 aa16.43■□□□□ 0.22
SNHG17-202ENST00000414142 TM6SF1Q9BZW5 370 aa16.43■□□□□ 0.22
SNHG17-202ENST00000414142 HELLSQ9NRZ9 838 aa16.43■□□□□ 0.22
SNHG17-202ENST00000414142 NARFQ9UHQ1 456 aa16.43■□□□□ 0.22
SNHG17-202ENST00000414142 CYP46A1Q9Y6A2 500 aa16.43■□□□□ 0.22
SNHG17-202ENST00000414142 RNF113AO15541 343 aaKnown RBP16.43■□□□□ 0.22
SNHG17-202ENST00000414142 CPA1P15085 419 aa16.43■□□□□ 0.22
SNHG17-202ENST00000414142 GTF2E1P29083 439 aaPredicted RBP16.43■□□□□ 0.22
SNHG17-202ENST00000414142 NUCB2P80303 420 aa16.43■□□□□ 0.22
SNHG17-202ENST00000414142 LRRFIP1Q32MZ4 808 aaKnown RBP16.43■□□□□ 0.22
SNHG17-202ENST00000414142 ERFEQ4G0M1 354 aa16.43■□□□□ 0.22
SNHG17-202ENST00000414142 TTC14Q96N46 770 aa16.43■□□□□ 0.22
SNHG17-202ENST00000414142 RGL2O15211 777 aa16.42■□□□□ 0.22
SNHG17-202ENST00000414142 SSFA2P28290 1259 aa16.42■□□□□ 0.22
SNHG17-202ENST00000414142 AK2P54819 239 aa16.42■□□□□ 0.22
SNHG17-202ENST00000414142 CUL4AQ13619 759 aa16.42■□□□□ 0.22
SNHG17-202ENST00000414142 SCARF1Q14162 830 aa16.42■□□□□ 0.22
SNHG17-202ENST00000414142 PUM3Q15397 648 aaKnown RBP16.42■□□□□ 0.22
SNHG17-202ENST00000414142 SLFNL1Q499Z3 407 aa16.42■□□□□ 0.22
SNHG17-202ENST00000414142 TBC1D9BQ66K14 1250 aa16.42■□□□□ 0.22
SNHG17-202ENST00000414142 ZSWIM6Q9HCJ5 1215 aa16.42■□□□□ 0.22
SNHG17-202ENST00000414142 PDRG1Q9NUG6 133 aa16.42■□□□□ 0.22
SNHG17-202ENST00000414142 SRP68Q9UHB9 627 aaKnown RBP16.42■□□□□ 0.22
SNHG17-202ENST00000414142 LAMB2P55268 1798 aa16.42■□□□□ 0.22
SNHG17-202ENST00000414142 ABCC12Q96J65 1359 aa16.42■□□□□ 0.22
SNHG17-202ENST00000414142 PTMSP20962 102 aa16.42■□□□□ 0.22
SNHG17-202ENST00000414142 PSMA5P28066 241 aa16.42■□□□□ 0.22
SNHG17-202ENST00000414142 ZAP70P43403 619 aa16.42■□□□□ 0.22
SNHG17-202ENST00000414142 ZMYM1Q5SVZ6 1142 aa16.42■□□□□ 0.22
SNHG17-202ENST00000414142 BCL2L12Q9HB09 334 aa16.42■□□□□ 0.22
SNHG17-202ENST00000414142 HMG20BQ9P0W2 317 aa16.42■□□□□ 0.22
SNHG17-202ENST00000414142 U3KPZ7 1027 aaPredicted RBP16.42■□□□□ 0.22
SNHG17-202ENST00000414142 RUFY3Q7L099 469 aa16.41■□□□□ 0.22
SNHG17-202ENST00000414142 LPIN2Q92539 896 aa16.41■□□□□ 0.22
SNHG17-202ENST00000414142 SETDB2Q96T68 719 aa16.41■□□□□ 0.22
SNHG17-202ENST00000414142 BCL11BQ9C0K0 894 aaPredicted RBP16.41■□□□□ 0.22
SNHG17-202ENST00000414142 LIMCH1Q9UPQ0 1083 aa16.41■□□□□ 0.22
SNHG17-202ENST00000414142 LY75O60449 1722 aa16.41■□□□□ 0.22
SNHG17-202ENST00000414142 RTL9Q8NET4 1388 aa16.41■□□□□ 0.22
SNHG17-202ENST00000414142 SLC5A1P13866 664 aa16.4■□□□□ 0.22
SNHG17-202ENST00000414142 VPS53Q5VIR6 699 aa16.4■□□□□ 0.22
SNHG17-202ENST00000414142 INTS4Q96HW7 963 aaKnown RBP16.4■□□□□ 0.22
SNHG17-202ENST00000414142 TAF1LQ8IZX4 1826 aa16.4■□□□□ 0.22
SNHG17-202ENST00000414142 SCN7AQ01118 1682 aa16.4■□□□□ 0.22
SNHG17-202ENST00000414142 TRAK2O60296 914 aa16.4■□□□□ 0.22
SNHG17-202ENST00000414142 ZNF512BQ96KM6 892 aaPredicted RBP16.4■□□□□ 0.22
SNHG17-202ENST00000414142 CDC5LQ99459 802 aaKnown RBP16.4■□□□□ 0.22
SNHG17-202ENST00000414142 LARP6Q9BRS8 491 aaKnown RBP16.4■□□□□ 0.22
SNHG17-202ENST00000414142 LRP5O75197 1615 aa16.4■□□□□ 0.22
SNHG17-202ENST00000414142 ZFYP08048 801 aaPredicted RBP16.39■□□□□ 0.21
SNHG17-202ENST00000414142 FGFR2P21802 821 aa16.39■□□□□ 0.21
SNHG17-202ENST00000414142 MCAMP43121 646 aa16.39■□□□□ 0.21
SNHG17-202ENST00000414142 CCDC102BQ68D86 513 aa16.39■□□□□ 0.21
SNHG17-202ENST00000414142 PI16Q6UXB8 463 aa16.39■□□□□ 0.21
SNHG17-202ENST00000414142 ARHGEF1Q92888 912 aaKnown RBP16.39■□□□□ 0.21
SNHG17-202ENST00000414142 NYXQ9GZU5 481 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms