RNA–Protein interactions for RNA: ENST00000413985.1

CRIM1-202, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-202ENST00000413985 RSPH6AQ9H0K4 717 aa14.6□□□□□ -0.07
CRIM1-202ENST00000413985 RBM27Q9P2N5 1060 aaKnown RBP14.6□□□□□ -0.07
CRIM1-202ENST00000413985 NSFL1CQ9UNZ2 370 aaKnown RBP14.6□□□□□ -0.07
CRIM1-202ENST00000413985 PTPN22Q9Y2R2 807 aa14.6□□□□□ -0.07
CRIM1-202ENST00000413985 C6orf229H3BNL8 230 aa14.59□□□□□ -0.07
CRIM1-202ENST00000413985 VIL1P09327 827 aaKnown RBP14.59□□□□□ -0.07
CRIM1-202ENST00000413985 GPSM2P81274 684 aa14.59□□□□□ -0.07
CRIM1-202ENST00000413985 SREBF2Q12772 1141 aa14.59□□□□□ -0.07
CRIM1-202ENST00000413985 TTLL12Q14166 644 aaPredicted RBP14.59□□□□□ -0.07
CRIM1-202ENST00000413985 PARP10Q53GL7 1025 aa14.59□□□□□ -0.07
CRIM1-202ENST00000413985 RTF1Q92541 710 aaKnown RBP14.59□□□□□ -0.07
CRIM1-202ENST00000413985 ARMC5Q96C12 935 aa14.59□□□□□ -0.07
CRIM1-202ENST00000413985 THUMPD2Q9BTF0 503 aaKnown RBP14.59□□□□□ -0.07
CRIM1-202ENST00000413985 ZNF609O15014 1411 aa14.58□□□□□ -0.07
CRIM1-202ENST00000413985 ZNF280AP59817 542 aaPredicted RBP14.58□□□□□ -0.08
CRIM1-202ENST00000413985 PTPN12Q05209 780 aaKnown RBP14.58□□□□□ -0.08
CRIM1-202ENST00000413985 CNGB1Q14028 1251 aaPredicted RBP14.58□□□□□ -0.08
CRIM1-202ENST00000413985 CD99L2Q8TCZ2 262 aa14.58□□□□□ -0.08
CRIM1-202ENST00000413985 PRKG1Q13976 671 aa14.57□□□□□ -0.08
CRIM1-202ENST00000413985 CELF1Q92879 486 aaKnown RBP14.57□□□□□ -0.08
CRIM1-202ENST00000413985 MYCP01106 439 aaPredicted RBP14.56□□□□□ -0.08
CRIM1-202ENST00000413985 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.56□□□□□ -0.08
CRIM1-202ENST00000413985 FZD1Q9UP38 647 aa14.56□□□□□ -0.08
CRIM1-202ENST00000413985 ANXA1P04083 346 aa14.55□□□□□ -0.08
CRIM1-202ENST00000413985 TAF7Q15545 349 aaPredicted RBP14.55□□□□□ -0.08
CRIM1-202ENST00000413985 LRP10Q7Z4F1 713 aa14.55□□□□□ -0.08
CRIM1-202ENST00000413985 MYOZ2Q9NPC6 264 aa14.55□□□□□ -0.08
CRIM1-202ENST00000413985 PITPNM2Q9BZ72 1349 aa14.55□□□□□ -0.08
CRIM1-202ENST00000413985 IGF2BP3O00425 579 aaKnown RBP eCLIP14.54□□□□□ -0.08
CRIM1-202ENST00000413985 EIF4A1P60842 406 aaKnown RBP14.54□□□□□ -0.08
CRIM1-202ENST00000413985 PROSER3Q2NL68 480 aa14.54□□□□□ -0.08
CRIM1-202ENST00000413985 NBPF9Q3BBW0 867 aa14.54□□□□□ -0.08
CRIM1-202ENST00000413985 SPRYD7Q5W111 196 aa14.54□□□□□ -0.08
CRIM1-202ENST00000413985 RSBN1LQ6PCB5 846 aaPredicted RBP14.54□□□□□ -0.08
CRIM1-202ENST00000413985 NLRP10Q86W26 655 aa14.54□□□□□ -0.08
CRIM1-202ENST00000413985 IFNL1Q8IU54 200 aa14.54□□□□□ -0.08
CRIM1-202ENST00000413985 TBC1D16Q8TBP0 767 aa14.54□□□□□ -0.08
CRIM1-202ENST00000413985 ZNF333Q96JL9 665 aa14.54□□□□□ -0.08
CRIM1-202ENST00000413985 TMEM106CQ9BVX2 250 aa14.54□□□□□ -0.08
CRIM1-202ENST00000413985 RANBP2P49792 3224 aaKnown RBP14.54□□□□□ -0.08
CRIM1-202ENST00000413985 A0A0C4DFX4 3053 aa14.53□□□□□ -0.08
CRIM1-202ENST00000413985 PSME4Q14997 1843 aa14.53□□□□□ -0.08
CRIM1-202ENST00000413985 EIF4G2P78344 907 aaKnown RBP eCLIP14.53□□□□□ -0.08
CRIM1-202ENST00000413985 GMLQ99445 158 aa14.53□□□□□ -0.08
CRIM1-202ENST00000413985 ALDH1A1P00352 501 aa14.52□□□□□ -0.09
CRIM1-202ENST00000413985 TCIRG1Q13488 830 aa14.52□□□□□ -0.09
CRIM1-202ENST00000413985 PDIA6Q15084 440 aa14.52□□□□□ -0.09
CRIM1-202ENST00000413985 SLC4A8Q2Y0W8 1093 aa14.52□□□□□ -0.09
CRIM1-202ENST00000413985 TMC4Q7Z404 712 aa14.52□□□□□ -0.09
CRIM1-202ENST00000413985 AGBL3Q8NEM8 1001 aa14.52□□□□□ -0.09
CRIM1-202ENST00000413985 ERO1AQ96HE7 468 aa14.52□□□□□ -0.09
CRIM1-202ENST00000413985 EYA3Q99504 573 aa14.52□□□□□ -0.09
CRIM1-202ENST00000413985 EFCC1Q9HA90 598 aa14.52□□□□□ -0.09
CRIM1-202ENST00000413985 TRMT112Q9UI30 125 aaKnown RBP14.52□□□□□ -0.09
CRIM1-202ENST00000413985 SH3TC1Q8TE82 1336 aa14.51□□□□□ -0.09
CRIM1-202ENST00000413985 SOX1O00570 391 aaPredicted RBP14.51□□□□□ -0.09
CRIM1-202ENST00000413985 USP17L8P0C7I0 530 aa14.51□□□□□ -0.09
CRIM1-202ENST00000413985 CRHR2Q13324 411 aa14.51□□□□□ -0.09
CRIM1-202ENST00000413985 CEP290O15078 2479 aa14.5□□□□□ -0.09
CRIM1-202ENST00000413985 WTIPA6NIX2 430 aaPredicted RBP14.5□□□□□ -0.09
CRIM1-202ENST00000413985 PER1O15534 1290 aaPredicted RBP14.5□□□□□ -0.09
CRIM1-202ENST00000413985 MNX1P50219 401 aaPredicted RBP14.5□□□□□ -0.09
CRIM1-202ENST00000413985 LRCH3Q96II8 777 aa14.5□□□□□ -0.09
CRIM1-202ENST00000413985 MXD3Q9BW11 206 aa14.5□□□□□ -0.09
CRIM1-202ENST00000413985 ZC3H12CQ9C0D7 883 aaKnown RBP14.5□□□□□ -0.09
CRIM1-202ENST00000413985 PRO3102Q9H379 93 aa14.5□□□□□ -0.09
CRIM1-202ENST00000413985 ANGEL1Q9UNK9 670 aaKnown RBP14.5□□□□□ -0.09
CRIM1-202ENST00000413985 PTCH2Q9Y6C5 1203 aa14.5□□□□□ -0.09
CRIM1-202ENST00000413985 LDLRAD1Q5T700 205 aa14.49□□□□□ -0.09
CRIM1-202ENST00000413985 ARMC9Q7Z3E5 817 aa14.49□□□□□ -0.09
CRIM1-202ENST00000413985 CLMNQ96JQ2 1002 aa14.49□□□□□ -0.09
CRIM1-202ENST00000413985 LAMB1P07942 1786 aa14.49□□□□□ -0.09
CRIM1-202ENST00000413985 MANSC4A6NHS7 340 aaPredicted RBP14.48□□□□□ -0.09
CRIM1-202ENST00000413985 G3V3G9 751 aa14.48□□□□□ -0.09
CRIM1-202ENST00000413985 HTATSF1O43719 755 aaKnown RBP14.48□□□□□ -0.09
CRIM1-202ENST00000413985 UFL1O94874 794 aa14.48□□□□□ -0.09
CRIM1-202ENST00000413985 NF2P35240 595 aa14.48□□□□□ -0.09
CRIM1-202ENST00000413985 AIMP1Q12904 312 aaKnown RBP14.48□□□□□ -0.09
CRIM1-202ENST00000413985 SLC9C1Q4G0N8 1177 aa14.48□□□□□ -0.09
CRIM1-202ENST00000413985 DCAF8Q5TAQ9 597 aa14.48□□□□□ -0.09
CRIM1-202ENST00000413985 DLG5Q8TDM6 1919 aa14.48□□□□□ -0.09
CRIM1-202ENST00000413985 ZSWIM8A7E2V4 1837 aa14.48□□□□□ -0.09
CRIM1-202ENST00000413985 ZNF646O15015 1829 aaPredicted RBP14.48□□□□□ -0.09
CRIM1-202ENST00000413985 WNT10BO00744 389 aa14.47□□□□□ -0.09
CRIM1-202ENST00000413985 SASH1O94885 1247 aa14.47□□□□□ -0.09
CRIM1-202ENST00000413985 U2AF1L5P0DN76 240 aaPredicted RBP14.47□□□□□ -0.09
CRIM1-202ENST00000413985 EIF2S2P20042 333 aaKnown RBP14.47□□□□□ -0.09
CRIM1-202ENST00000413985 U2AF1Q01081 240 aaKnown RBP eCLIP14.47□□□□□ -0.09
CRIM1-202ENST00000413985 SP3Q02447 781 aa14.47□□□□□ -0.09
CRIM1-202ENST00000413985 SH3TC2Q8TF17 1288 aa14.47□□□□□ -0.09
CRIM1-202ENST00000413985 DPF3Q92784 378 aa14.47□□□□□ -0.09
CRIM1-202ENST00000413985 SHISA4Q96DD7 197 aa14.47□□□□□ -0.09
CRIM1-202ENST00000413985 WNK4Q96J92 1243 aa14.47□□□□□ -0.09
CRIM1-202ENST00000413985 LAMA3Q16787 3333 aa14.47□□□□□ -0.09
CRIM1-202ENST00000413985 ERBB4Q15303 1308 aa14.46□□□□□ -0.09
CRIM1-202ENST00000413985 GJA5P36382 358 aa14.46□□□□□ -0.09
CRIM1-202ENST00000413985 SF3B3Q15393 1217 aaKnown RBP14.46□□□□□ -0.09
CRIM1-202ENST00000413985 RTL5Q5HYW3 569 aaPredicted RBP14.46□□□□□ -0.09
CRIM1-202ENST00000413985 COPS6Q7L5N1 327 aa14.46□□□□□ -0.09
CRIM1-202ENST00000413985 FAM89AQ96GI7 184 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms