RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 RBM8AQ9Y5S9 174 aaKnown RBP15.49■□□□□ 0.07
CLINT1-201ENST00000411809 AKAP11Q9UKA4 1901 aa15.49■□□□□ 0.07
CLINT1-201ENST00000411809 TFCP2Q12800 502 aa15.49■□□□□ 0.07
CLINT1-201ENST00000411809 ATP2B3Q16720 1220 aa15.49■□□□□ 0.07
CLINT1-201ENST00000411809 FERMT3Q86UX7 667 aa15.49■□□□□ 0.07
CLINT1-201ENST00000411809 GPR108Q9NPR9 543 aa15.49■□□□□ 0.07
CLINT1-201ENST00000411809 STX6O43752 255 aa15.48■□□□□ 0.07
CLINT1-201ENST00000411809 CASTP20810 708 aaKnown RBP15.48■□□□□ 0.07
CLINT1-201ENST00000411809 HAUS7Q99871 368 aa15.48■□□□□ 0.07
CLINT1-201ENST00000411809 PHLPP1O60346 1717 aa15.48■□□□□ 0.07
CLINT1-201ENST00000411809 AP5Z1O43299 807 aa15.48■□□□□ 0.07
CLINT1-201ENST00000411809 ZSCAN22P10073 491 aaPredicted RBP15.48■□□□□ 0.07
CLINT1-201ENST00000411809 PRPF40BQ6NWY9 871 aaKnown RBP15.48■□□□□ 0.07
CLINT1-201ENST00000411809 FAM173BQ6P4H8 233 aa15.48■□□□□ 0.07
CLINT1-201ENST00000411809 UBE3BQ7Z3V4 1068 aa15.48■□□□□ 0.07
CLINT1-201ENST00000411809 TAF5LO75529 589 aa15.48■□□□□ 0.07
CLINT1-201ENST00000411809 TTLL7Q6ZT98 887 aa15.48■□□□□ 0.07
CLINT1-201ENST00000411809 SIL1Q9H173 461 aa15.48■□□□□ 0.07
CLINT1-201ENST00000411809 DOT1LQ8TEK3 1739 aa15.47■□□□□ 0.07
CLINT1-201ENST00000411809 SLIT2O94813 1529 aa15.47■□□□□ 0.07
CLINT1-201ENST00000411809 KDM4AO75164 1064 aa15.47■□□□□ 0.07
CLINT1-201ENST00000411809 FAM184AQ8NB25 1140 aa15.47■□□□□ 0.07
CLINT1-201ENST00000411809 BCL2L12Q9HB09 334 aa15.47■□□□□ 0.07
CLINT1-201ENST00000411809 LAMB2P55268 1798 aa15.47■□□□□ 0.07
CLINT1-201ENST00000411809 ATG3Q9NT62 314 aa15.47■□□□□ 0.07
CLINT1-201ENST00000411809 ZNF335Q9H4Z2 1342 aaPredicted RBP15.46■□□□□ 0.07
CLINT1-201ENST00000411809 IL2RBP14784 551 aa15.46■□□□□ 0.07
CLINT1-201ENST00000411809 HMGN5P82970 282 aaKnown RBP15.46■□□□□ 0.07
CLINT1-201ENST00000411809 ISCA1Q9BUE6 129 aa15.46■□□□□ 0.07
CLINT1-201ENST00000411809 A0A087WZG4 1122 aa15.46■□□□□ 0.07
CLINT1-201ENST00000411809 KDM4FA0A1W2PPD8 638 aa15.46■□□□□ 0.07
CLINT1-201ENST00000411809 ME3Q16798 604 aa15.46■□□□□ 0.07
CLINT1-201ENST00000411809 BOLA2Q9H3K6 86 aa15.46■□□□□ 0.07
CLINT1-201ENST00000411809 CASZ1Q86V15 1759 aa15.46■□□□□ 0.07
CLINT1-201ENST00000411809 TOB2Q14106 344 aaPredicted RBP15.46■□□□□ 0.06
CLINT1-201ENST00000411809 NECAB1Q8N987 351 aa15.46■□□□□ 0.06
CLINT1-201ENST00000411809 PRIMPOLQ96LW4 560 aa15.46■□□□□ 0.06
CLINT1-201ENST00000411809 TPCN1Q9ULQ1 816 aa15.46■□□□□ 0.06
CLINT1-201ENST00000411809 ROBO1Q9Y6N7 1651 aa15.45■□□□□ 0.06
CLINT1-201ENST00000411809 SH3TC1Q8TE82 1336 aa15.45■□□□□ 0.06
CLINT1-201ENST00000411809 ATP5J2-PTCD1G3V325 749 aa15.45■□□□□ 0.06
CLINT1-201ENST00000411809 RIOK3O14730 519 aaKnown RBP15.45■□□□□ 0.06
CLINT1-201ENST00000411809 PTCD1O75127 700 aaKnown RBP15.45■□□□□ 0.06
CLINT1-201ENST00000411809 UBE2HP62256 183 aa15.45■□□□□ 0.06
CLINT1-201ENST00000411809 DRC7Q8IY82 874 aa15.45■□□□□ 0.06
CLINT1-201ENST00000411809 SH2B1Q9NRF2 756 aaPredicted RBP15.45■□□□□ 0.06
CLINT1-201ENST00000411809 KLHL34Q8N239 644 aa15.45■□□□□ 0.06
CLINT1-201ENST00000411809 ZSCAN31Q96LW9 406 aaPredicted RBP15.45■□□□□ 0.06
CLINT1-201ENST00000411809 JAKMIP1Q96N16 626 aaKnown RBP15.45■□□□□ 0.06
CLINT1-201ENST00000411809 PDRG1Q9NUG6 133 aa15.45■□□□□ 0.06
CLINT1-201ENST00000411809 DOCK2Q92608 1830 aa15.45■□□□□ 0.06
CLINT1-201ENST00000411809 ZSCAN20P17040 1043 aaPredicted RBP15.45■□□□□ 0.06
CLINT1-201ENST00000411809 U2AF2P26368 475 aaKnown RBP eCLIP15.45■□□□□ 0.067e-8■■■■□ 24
CLINT1-201ENST00000411809 CKAP2LQ8IYA6 745 aa15.45■□□□□ 0.06
CLINT1-201ENST00000411809 CCDC191Q8NCU4 936 aa15.45■□□□□ 0.06
CLINT1-201ENST00000411809 EDC3Q96F86 508 aaKnown RBP15.45■□□□□ 0.06
CLINT1-201ENST00000411809 CIAO1O76071 339 aa15.44■□□□□ 0.06
CLINT1-201ENST00000411809 F13A1P00488 732 aa15.44■□□□□ 0.06
CLINT1-201ENST00000411809 UVSSAQ2YD98 709 aa15.44■□□□□ 0.06
CLINT1-201ENST00000411809 PDCL2Q8N4E4 241 aa15.44■□□□□ 0.06
CLINT1-201ENST00000411809 MTMR6Q9Y217 621 aa15.44■□□□□ 0.06
CLINT1-201ENST00000411809 GJB2P29033 226 aa15.44■□□□□ 0.06
CLINT1-201ENST00000411809 CHAF1AQ13111 956 aaPredicted RBP15.44■□□□□ 0.06
CLINT1-201ENST00000411809 TRIM28Q13263 835 aaKnown RBP15.44■□□□□ 0.06
CLINT1-201ENST00000411809 DBNDD2Q9BQY9 259 aa15.44■□□□□ 0.06
CLINT1-201ENST00000411809 KCNF1Q9H3M0 494 aa15.44■□□□□ 0.06
CLINT1-201ENST00000411809 PRDM11Q9NQV5 511 aa15.44■□□□□ 0.06
CLINT1-201ENST00000411809 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.44■□□□□ 0.06
CLINT1-201ENST00000411809 ZNF831Q5JPB2 1677 aa15.44■□□□□ 0.06
CLINT1-201ENST00000411809 A1BGP04217 495 aa15.43■□□□□ 0.06
CLINT1-201ENST00000411809 TCEANC2Q96MN5 208 aa15.43■□□□□ 0.06
CLINT1-201ENST00000411809 PLA2G12BQ9BX93 195 aa15.43■□□□□ 0.06
CLINT1-201ENST00000411809 CYP46A1Q9Y6A2 500 aa15.43■□□□□ 0.06
CLINT1-201ENST00000411809 A0A1B0GUL6 1792 aa15.43■□□□□ 0.06
CLINT1-201ENST00000411809 CHGBP05060 677 aa15.43■□□□□ 0.06
CLINT1-201ENST00000411809 PTGS1P23219 599 aa15.43■□□□□ 0.06
CLINT1-201ENST00000411809 RPS6KB1P23443 525 aa15.43■□□□□ 0.06
CLINT1-201ENST00000411809 LMBR1LQ6UX01 489 aa15.43■□□□□ 0.06
CLINT1-201ENST00000411809 HMG20BQ9P0W2 317 aa15.43■□□□□ 0.06
CLINT1-201ENST00000411809 BCL9O00512 1426 aa15.43■□□□□ 0.06
CLINT1-201ENST00000411809 TOM1L2Q6ZVM7 507 aa15.43■□□□□ 0.06
CLINT1-201ENST00000411809 CWC25Q9NXE8 425 aaPredicted RBP15.43■□□□□ 0.06
CLINT1-201ENST00000411809 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.42■□□□□ 0.06
CLINT1-201ENST00000411809 RIC1Q4ADV7 1423 aa15.42■□□□□ 0.06
CLINT1-201ENST00000411809 LUZP1Q86V48 1076 aa15.42■□□□□ 0.06
CLINT1-201ENST00000411809 C16orf45Q96MC5 204 aaPredicted RBP15.42■□□□□ 0.06
CLINT1-201ENST00000411809 MYO5AQ9Y4I1 1855 aaKnown RBP15.42■□□□□ 0.06
CLINT1-201ENST00000411809 LRMPQ12912 555 aa15.42■□□□□ 0.06
CLINT1-201ENST00000411809 FSD1Q9BTV5 496 aa15.42■□□□□ 0.06
CLINT1-201ENST00000411809 KCNJ4P48050 445 aa15.41■□□□□ 0.06
CLINT1-201ENST00000411809 COL5A3P25940 1745 aaPredicted RBP15.41■□□□□ 0.06
CLINT1-201ENST00000411809 TFIP11Q9UBB9 837 aaKnown RBP15.41■□□□□ 0.06
CLINT1-201ENST00000411809 BCORQ6W2J9 1755 aa15.4■□□□□ 0.06
CLINT1-201ENST00000411809 DMTNQ08495 405 aa15.4■□□□□ 0.06
CLINT1-201ENST00000411809 KBTBD3Q8NAB2 608 aa15.4■□□□□ 0.06
CLINT1-201ENST00000411809 KIAA1524Q8TCG1 905 aa15.4■□□□□ 0.06
CLINT1-201ENST00000411809 CCDC9Q9Y3X0 531 aaKnown RBP15.4■□□□□ 0.06
CLINT1-201ENST00000411809 C4AP0C0L4 1744 aa15.4■□□□□ 0.06
CLINT1-201ENST00000411809 C4BP0C0L5 1744 aa15.4■□□□□ 0.06
CLINT1-201ENST00000411809 CSF1RP07333 972 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms