RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 CCDC191Q8NCU4 936 aa18.82■□□□□ 0.6
HOXD3-202ENST00000410016 PAG1Q9NWQ8 432 aa18.82■□□□□ 0.6
HOXD3-202ENST00000410016 CCDC9Q9Y3X0 531 aaKnown RBP18.82■□□□□ 0.6
HOXD3-202ENST00000410016 GOLIM4O00461 696 aa18.81■□□□□ 0.6
HOXD3-202ENST00000410016 LRRC24Q50LG9 513 aa18.81■□□□□ 0.6
HOXD3-202ENST00000410016 LEO1Q8WVC0 666 aaPredicted RBP18.81■□□□□ 0.6
HOXD3-202ENST00000410016 HELLSQ9NRZ9 838 aa18.81■□□□□ 0.6
HOXD3-202ENST00000410016 MPNDQ8N594 471 aa18.81■□□□□ 0.6
HOXD3-202ENST00000410016 EYA2O00167 538 aa18.8■□□□□ 0.6
HOXD3-202ENST00000410016 RRP9O43818 475 aaKnown RBP18.8■□□□□ 0.6
HOXD3-202ENST00000410016 CCDC192P0DO97 292 aa18.8■□□□□ 0.6
HOXD3-202ENST00000410016 SCRN1Q12765 414 aa18.8■□□□□ 0.6
HOXD3-202ENST00000410016 ZMYM1Q5SVZ6 1142 aa18.8■□□□□ 0.6
HOXD3-202ENST00000410016 BRF1Q92994 677 aa18.8■□□□□ 0.6
HOXD3-202ENST00000410016 ZNF830Q96NB3 372 aaPredicted RBP18.8■□□□□ 0.6
HOXD3-202ENST00000410016 DSCC1Q9BVC3 393 aa18.8■□□□□ 0.6
HOXD3-202ENST00000410016 ATG3Q9NT62 314 aa18.8■□□□□ 0.6
HOXD3-202ENST00000410016 KCPQ6ZWJ8 1503 aa18.8■□□□□ 0.6
HOXD3-202ENST00000410016 SMARCC2Q8TAQ2 1214 aa18.79■□□□□ 0.6
HOXD3-202ENST00000410016 ZNF594Q96JF6 807 aaPredicted RBP18.79■□□□□ 0.6
HOXD3-202ENST00000410016 SPATA32Q96LK8 384 aa18.79■□□□□ 0.6
HOXD3-202ENST00000410016 LRRC2Q9BYS8 371 aa18.79■□□□□ 0.6
HOXD3-202ENST00000410016 ZBTB3Q9H5J0 574 aa18.79■□□□□ 0.6
HOXD3-202ENST00000410016 HMGB1P09429 215 aaKnown RBP18.79■□□□□ 0.6
HOXD3-202ENST00000410016 KIAA2012Q0VF49 1180 aa18.79■□□□□ 0.6
HOXD3-202ENST00000410016 RESTQ13127 1097 aa18.79■□□□□ 0.6
HOXD3-202ENST00000410016 TOM1L2Q6ZVM7 507 aa18.79■□□□□ 0.6
HOXD3-202ENST00000410016 BRINP3Q76B58 766 aa18.79■□□□□ 0.6
HOXD3-202ENST00000410016 DHX32Q7L7V1 743 aaKnown RBP18.79■□□□□ 0.6
HOXD3-202ENST00000410016 AGXT2Q9BYV1 514 aa18.79■□□□□ 0.6
HOXD3-202ENST00000410016 NUP62CLQ9H1M0 184 aa18.79■□□□□ 0.6
HOXD3-202ENST00000410016 EXOSC10Q01780 885 aaKnown RBP18.78■□□□□ 0.6
HOXD3-202ENST00000410016 PGBD1Q96JS3 809 aa18.78■□□□□ 0.6
HOXD3-202ENST00000410016 PRDM11Q9NQV5 511 aa18.78■□□□□ 0.6
HOXD3-202ENST00000410016 DACT1Q9NYF0 836 aa18.78■□□□□ 0.6
HOXD3-202ENST00000410016 PFKFB2O60825 505 aa18.78■□□□□ 0.6
HOXD3-202ENST00000410016 CIAO1O76071 339 aa18.78■□□□□ 0.6
HOXD3-202ENST00000410016 CAMK4Q16566 473 aa18.78■□□□□ 0.6
HOXD3-202ENST00000410016 MAP3K11Q16584 847 aa18.78■□□□□ 0.6
HOXD3-202ENST00000410016 UBR2Q8IWV8 1755 aa18.78■□□□□ 0.6
HOXD3-202ENST00000410016 HSPD1P10809 573 aaKnown RBP18.77■□□□□ 0.6
HOXD3-202ENST00000410016 HSP90AA2PQ14568 343 aaPredicted RBP18.77■□□□□ 0.6
HOXD3-202ENST00000410016 RBM43Q6ZSC3 357 aaKnown RBP18.77■□□□□ 0.6
HOXD3-202ENST00000410016 LLPHQ9BRT6 129 aaKnown RBP18.77■□□□□ 0.6
HOXD3-202ENST00000410016 PUS3Q9BZE2 481 aaKnown RBP18.77■□□□□ 0.6
HOXD3-202ENST00000410016 TTC12Q9H892 705 aaPredicted RBP18.77■□□□□ 0.6
HOXD3-202ENST00000410016 NUP188Q5SRE5 1749 aa18.77■□□□□ 0.6
HOXD3-202ENST00000410016 TJP1Q07157 1748 aa18.77■□□□□ 0.6
HOXD3-202ENST00000410016 A0A0G2JLW4 131 aa18.77■□□□□ 0.6
HOXD3-202ENST00000410016 A0A1B0GUL7 405 aa18.77■□□□□ 0.6
HOXD3-202ENST00000410016 DDX11Q96FC9 970 aa18.77■□□□□ 0.6
HOXD3-202ENST00000410016 MRVI1Q9Y6F6 885 aa18.77■□□□□ 0.6
HOXD3-202ENST00000410016 CTDNEP1O95476 244 aa18.76■□□□□ 0.59
HOXD3-202ENST00000410016 HSP90B1P14625 803 aaKnown RBP18.76■□□□□ 0.59
HOXD3-202ENST00000410016 PIBF1Q8WXW3 757 aa18.76■□□□□ 0.59
HOXD3-202ENST00000410016 ISCA1Q9BUE6 129 aa18.76■□□□□ 0.59
HOXD3-202ENST00000410016 TYRO3Q06418 890 aa18.76■□□□□ 0.59
HOXD3-202ENST00000410016 GLIPR1L2Q4G1C9 344 aa18.76■□□□□ 0.59
HOXD3-202ENST00000410016 NSUN7Q8NE18 718 aaKnown RBP18.76■□□□□ 0.59
HOXD3-202ENST00000410016 FAM200AQ8TCP9 573 aa18.76■□□□□ 0.59
HOXD3-202ENST00000410016 ZSCAN16Q9H4T2 348 aaPredicted RBP18.76■□□□□ 0.59
HOXD3-202ENST00000410016 TNS2Q63HR2 1409 aa18.76■□□□□ 0.59
HOXD3-202ENST00000410016 MAST3O60307 1309 aa18.75■□□□□ 0.59
HOXD3-202ENST00000410016 IFIT1P09914 478 aaKnown RBP18.75■□□□□ 0.59
HOXD3-202ENST00000410016 DDX19AQ9NUU7 478 aaKnown RBP18.75■□□□□ 0.59
HOXD3-202ENST00000410016 PODXL2Q9NZ53 605 aa18.75■□□□□ 0.59
HOXD3-202ENST00000410016 COL5A2P05997 1499 aaPredicted RBP18.75■□□□□ 0.59
HOXD3-202ENST00000410016 GOLGA6L4A6NEF3 574 aa18.75■□□□□ 0.59
HOXD3-202ENST00000410016 RNF113AO15541 343 aaKnown RBP18.75■□□□□ 0.59
HOXD3-202ENST00000410016 IL2RBP14784 551 aa18.75■□□□□ 0.59
HOXD3-202ENST00000410016 ADD1P35611 737 aaKnown RBP18.75■□□□□ 0.59
HOXD3-202ENST00000410016 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.75■□□□□ 0.59
HOXD3-202ENST00000410016 TNMDQ9H2S6 317 aa18.75■□□□□ 0.59
HOXD3-202ENST00000410016 E7EWF7 191 aa18.74■□□□□ 0.59
HOXD3-202ENST00000410016 NR1I2O75469 434 aa18.74■□□□□ 0.59
HOXD3-202ENST00000410016 CARD10Q9BWT7 1032 aa18.74■□□□□ 0.59
HOXD3-202ENST00000410016 H3BQV1 296 aa18.74■□□□□ 0.59
HOXD3-202ENST00000410016 FGD1P98174 961 aa18.74■□□□□ 0.59
HOXD3-202ENST00000410016 APOBRQ0VD83 1088 aa18.74■□□□□ 0.59
HOXD3-202ENST00000410016 IFFO2Q5TF58 517 aa18.74■□□□□ 0.59
HOXD3-202ENST00000410016 CKAP2LQ8IYA6 745 aa18.74■□□□□ 0.59
HOXD3-202ENST00000410016 CLSTN2Q9H4D0 955 aa18.74■□□□□ 0.59
HOXD3-202ENST00000410016 PLCB2Q00722 1185 aa18.73■□□□□ 0.59
HOXD3-202ENST00000410016 TCIRG1Q13488 830 aa18.73■□□□□ 0.59
HOXD3-202ENST00000410016 NOLC1Q14978 699 aaKnown RBP eCLIP18.73■□□□□ 0.59
HOXD3-202ENST00000410016 SOS2Q07890 1332 aaPredicted RBP18.73■□□□□ 0.59
HOXD3-202ENST00000410016 TRIM28Q13263 835 aaKnown RBP18.73■□□□□ 0.59
HOXD3-202ENST00000410016 NAA16Q6N069 864 aaPredicted RBP18.73■□□□□ 0.59
HOXD3-202ENST00000410016 OSBP2Q969R2 916 aa18.73■□□□□ 0.59
HOXD3-202ENST00000410016 PAPPAQ13219 1627 aa18.72■□□□□ 0.59
HOXD3-202ENST00000410016 M0R2C6 588 aa18.72■□□□□ 0.59
HOXD3-202ENST00000410016 CEP126Q9P2H0 1117 aa18.72■□□□□ 0.59
HOXD3-202ENST00000410016 CFAP45Q9UL16 551 aa18.72■□□□□ 0.59
HOXD3-202ENST00000410016 SALL1Q9NSC2 1324 aa18.72■□□□□ 0.59
HOXD3-202ENST00000410016 UQCRHLA0A096LP55 91 aa18.71■□□□□ 0.59
HOXD3-202ENST00000410016 UQCRHP07919 91 aa18.71■□□□□ 0.59
HOXD3-202ENST00000410016 SASS6Q6UVJ0 657 aa18.71■□□□□ 0.59
HOXD3-202ENST00000410016 LUZP1Q86V48 1076 aa18.71■□□□□ 0.59
HOXD3-202ENST00000410016 SPTLC3Q9NUV7 552 aa18.71■□□□□ 0.59
HOXD3-202ENST00000410016 PTPDC1A2A3K4 754 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms