RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 TIMMDC1Q9NPL8 285 aa7.47□□□□□ -1.21
CLK1-202ENST00000409403 BCS1LQ9Y276 419 aa7.47□□□□□ -1.21
CLK1-202ENST00000409403 ZMYM3Q14202 1370 aa7.47□□□□□ -1.21
CLK1-202ENST00000409403 NWD1Q149M9 1564 aa7.47□□□□□ -1.21
CLK1-202ENST00000409403 ABCC1P33527 1531 aa7.47□□□□□ -1.21
CLK1-202ENST00000409403 TGFBR3LH3BV60 316 aa7.47□□□□□ -1.21
CLK1-202ENST00000409403 COL19A1Q14993 1142 aa7.47□□□□□ -1.21
CLK1-202ENST00000409403 TMC1Q8TDI8 760 aa7.47□□□□□ -1.21
CLK1-202ENST00000409403 ANKIB1Q9P2G1 1089 aa7.47□□□□□ -1.21
CLK1-202ENST00000409403 MED14O60244 1454 aa7.46□□□□□ -1.21
CLK1-202ENST00000409403 MZF1P28698 734 aaPredicted RBP7.46□□□□□ -1.22
CLK1-202ENST00000409403 USP5P45974 858 aa7.46□□□□□ -1.22
CLK1-202ENST00000409403 PDE3BQ13370 1112 aa7.46□□□□□ -1.22
CLK1-202ENST00000409403 ARSJQ5FYB0 599 aaPredicted RBP7.46□□□□□ -1.22
CLK1-202ENST00000409403 IER5Q5VY09 327 aa7.46□□□□□ -1.22
CLK1-202ENST00000409403 GIPC2Q8TF65 315 aa7.46□□□□□ -1.22
CLK1-202ENST00000409403 SUSD3Q96L08 255 aa7.46□□□□□ -1.22
CLK1-202ENST00000409403 PLCH2O75038 1416 aa7.46□□□□□ -1.22
CLK1-202ENST00000409403 AFF2P51816 1311 aa7.46□□□□□ -1.22
CLK1-202ENST00000409403 MYO5CQ9NQX4 1742 aa7.45□□□□□ -1.22
CLK1-202ENST00000409403 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.45□□□□□ -1.22
CLK1-202ENST00000409403 E9PSI1 815 aa7.45□□□□□ -1.22
CLK1-202ENST00000409403 ZNF16P17020 682 aaPredicted RBP7.45□□□□□ -1.22
CLK1-202ENST00000409403 MSX1P28360 303 aa7.45□□□□□ -1.22
CLK1-202ENST00000409403 DEKP35659 375 aaKnown RBP7.45□□□□□ -1.22
CLK1-202ENST00000409403 DNM1Q05193 864 aaKnown RBP7.45□□□□□ -1.22
CLK1-202ENST00000409403 ZNF280CQ8ND82 737 aa7.45□□□□□ -1.22
CLK1-202ENST00000409403 EDEM1Q92611 657 aa7.45□□□□□ -1.22
CLK1-202ENST00000409403 DMRTB1Q96MA1 342 aa7.45□□□□□ -1.22
CLK1-202ENST00000409403 NEUROD4Q9HD90 331 aa7.45□□□□□ -1.22
CLK1-202ENST00000409403 FAM13BQ9NYF5 915 aa7.45□□□□□ -1.22
CLK1-202ENST00000409403 POLIQ9UNA4 740 aa7.45□□□□□ -1.22
CLK1-202ENST00000409403 KIF27Q86VH2 1401 aa7.45□□□□□ -1.22
CLK1-202ENST00000409403 ZNF518AQ6AHZ1 1483 aa7.45□□□□□ -1.22
CLK1-202ENST00000409403 MICAL2O94851 1124 aa7.44□□□□□ -1.22
CLK1-202ENST00000409403 PCSK2P16519 638 aa7.44□□□□□ -1.22
CLK1-202ENST00000409403 HSH2DQ96JZ2 352 aa7.44□□□□□ -1.22
CLK1-202ENST00000409403 ZIC5Q96T25 663 aa7.44□□□□□ -1.22
CLK1-202ENST00000409403 FAM129BQ96TA1 746 aa7.44□□□□□ -1.22
CLK1-202ENST00000409403 DNMT3LQ9UJW3 386 aa7.44□□□□□ -1.22
CLK1-202ENST00000409403 TREHO43280 583 aa7.44□□□□□ -1.22
CLK1-202ENST00000409403 PDGFAP04085 211 aa7.44□□□□□ -1.22
CLK1-202ENST00000409403 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.44□□□□□ -1.221e-6■■□□□ 12.3
CLK1-202ENST00000409403 ZNF326Q5BKZ1 582 aaKnown RBP7.44□□□□□ -1.22
CLK1-202ENST00000409403 FBXO33Q7Z6M2 555 aa7.44□□□□□ -1.22
CLK1-202ENST00000409403 GJD3Q8N144 294 aa7.44□□□□□ -1.22
CLK1-202ENST00000409403 GPR152Q8TDT2 470 aa7.44□□□□□ -1.22
CLK1-202ENST00000409403 KLRG1Q96E93 195 aa7.44□□□□□ -1.22
CLK1-202ENST00000409403 DYRK1BQ9Y463 629 aa7.44□□□□□ -1.22
CLK1-202ENST00000409403 GOLGA3Q08378 1498 aa7.44□□□□□ -1.22
CLK1-202ENST00000409403 SPATA31A6Q5VVP1 1343 aa7.43□□□□□ -1.22
CLK1-202ENST00000409403 MAP3K1Q13233 1512 aa7.43□□□□□ -1.22
CLK1-202ENST00000409403 KIDINS220Q9ULH0 1771 aa7.43□□□□□ -1.22
CLK1-202ENST00000409403 EAPPQ56P03 285 aaPredicted RBP7.43□□□□□ -1.22
CLK1-202ENST00000409403 ATP13A2Q9NQ11 1180 aa7.43□□□□□ -1.22
CLK1-202ENST00000409403 DMGDHQ9UI17 866 aaKnown RBP7.43□□□□□ -1.22
CLK1-202ENST00000409403 LRRC9Q6ZRR7 1453 aa7.43□□□□□ -1.22
CLK1-202ENST00000409403 KIF14Q15058 1648 aa7.42□□□□□ -1.22
CLK1-202ENST00000409403 ST8SIA5O15466 376 aa7.42□□□□□ -1.22
CLK1-202ENST00000409403 MAN1A2O60476 641 aa7.42□□□□□ -1.22
CLK1-202ENST00000409403 IGHA2P01877 340 aa7.42□□□□□ -1.22
CLK1-202ENST00000409403 IDH3AP50213 366 aa7.42□□□□□ -1.22
CLK1-202ENST00000409403 FMR1Q06787 632 aaKnown RBP eCLIP7.42□□□□□ -1.22
CLK1-202ENST00000409403 LRRC69Q6ZNQ3 347 aa7.42□□□□□ -1.22
CLK1-202ENST00000409403 PIK3R5Q8WYR1 880 aa7.42□□□□□ -1.22
CLK1-202ENST00000409403 CRISPLD1Q9H336 500 aa7.42□□□□□ -1.22
CLK1-202ENST00000409403 GPAMQ9HCL2 828 aa7.42□□□□□ -1.22
CLK1-202ENST00000409403 GJA3Q9Y6H8 435 aa7.42□□□□□ -1.22
CLK1-202ENST00000409403 A0A1W2PNR3 127 aa7.41□□□□□ -1.22
CLK1-202ENST00000409403 UNCXA6NJT0 531 aa7.41□□□□□ -1.22
CLK1-202ENST00000409403 OPLAHO14841 1288 aa7.41□□□□□ -1.22
CLK1-202ENST00000409403 GPR182O15218 404 aa7.41□□□□□ -1.22
CLK1-202ENST00000409403 F11P03951 625 aa7.41□□□□□ -1.22
CLK1-202ENST00000409403 RPLP1P05386 114 aaKnown RBP7.41□□□□□ -1.22
CLK1-202ENST00000409403 P4HBP07237 508 aaKnown RBP7.41□□□□□ -1.22
CLK1-202ENST00000409403 RBM6P78332 1123 aaKnown RBP7.41□□□□□ -1.22
CLK1-202ENST00000409403 PLCB3Q01970 1234 aa7.41□□□□□ -1.22
CLK1-202ENST00000409403 DSC3Q14574 896 aa7.41□□□□□ -1.22
CLK1-202ENST00000409403 BTLAQ7Z6A9 289 aa7.41□□□□□ -1.22
CLK1-202ENST00000409403 PGBD3Q8N328 593 aa7.41□□□□□ -1.22
CLK1-202ENST00000409403 TTC16Q8NEE8 873 aa7.41□□□□□ -1.22
CLK1-202ENST00000409403 ALKBH8Q96BT7 664 aaKnown RBP7.41□□□□□ -1.22
CLK1-202ENST00000409403 NUDT16Q96DE0 195 aaKnown RBP7.41□□□□□ -1.22
CLK1-202ENST00000409403 AAASQ9NRG9 546 aa7.41□□□□□ -1.22
CLK1-202ENST00000409403 ARSDP51689 593 aa7.41□□□□□ -1.22
CLK1-202ENST00000409403 EHHADHQ08426 723 aa7.41□□□□□ -1.22
CLK1-202ENST00000409403 GAS2L1Q99501 681 aaPredicted RBP7.41□□□□□ -1.22
CLK1-202ENST00000409403 RUBCNLQ9H714 662 aa7.41□□□□□ -1.22
CLK1-202ENST00000409403 CDK11AQ9UQ88 783 aaPredicted RBP7.41□□□□□ -1.22
CLK1-202ENST00000409403 FGD6Q6ZV73 1430 aa7.4□□□□□ -1.22
CLK1-202ENST00000409403 CHD4Q14839 1912 aa7.4□□□□□ -1.22
CLK1-202ENST00000409403 DIP2AQ14689 1571 aa7.4□□□□□ -1.22
CLK1-202ENST00000409403 POTECB2RU33 542 aa7.4□□□□□ -1.23
CLK1-202ENST00000409403 INPP5BP32019 993 aa7.4□□□□□ -1.23
CLK1-202ENST00000409403 DEFB132Q7Z7B7 95 aa7.4□□□□□ -1.23
CLK1-202ENST00000409403 MAPK8P45983 427 aa7.39□□□□□ -1.23
CLK1-202ENST00000409403 C8orf34Q49A92 452 aa7.39□□□□□ -1.23
CLK1-202ENST00000409403 NLRP8Q86W28 1048 aa7.39□□□□□ -1.23
CLK1-202ENST00000409403 NIF3L1Q9GZT8 377 aa7.39□□□□□ -1.23
CLK1-202ENST00000409403 CEP162Q5TB80 1403 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 189.1 ms