RNA–Protein interactions for RNA: ENST00000407583.7

GPN1-202, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best) BASIC

Gene GPN1, Length 1,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-202ENST00000407583 AEBP1Q8IUX7 1158 aa11.28□□□□□ -0.6
GPN1-202ENST00000407583 SHISA4Q96DD7 197 aa11.28□□□□□ -0.6
GPN1-202ENST00000407583 ERO1AQ96HE7 468 aa11.28□□□□□ -0.6
GPN1-202ENST00000407583 SNX27Q96L92 541 aa11.28□□□□□ -0.6
GPN1-202ENST00000407583 EFCC1Q9HA90 598 aa11.28□□□□□ -0.6
GPN1-202ENST00000407583 UBR2Q8IWV8 1755 aa11.27□□□□□ -0.61
GPN1-202ENST00000407583 WDR43Q15061 677 aaKnown RBP eCLIP11.27□□□□□ -0.61
GPN1-202ENST00000407583 SLC9C1Q4G0N8 1177 aa11.27□□□□□ -0.61
GPN1-202ENST00000407583 VPS33BQ9H267 617 aa11.27□□□□□ -0.61
GPN1-202ENST00000407583 POLKQ9UBT6 870 aa11.27□□□□□ -0.61
GPN1-202ENST00000407583 STAP2Q9UGK3 403 aa11.27□□□□□ -0.61
GPN1-202ENST00000407583 A1BGP04217 495 aa11.26□□□□□ -0.61
GPN1-202ENST00000407583 TNNT2P45379 298 aaPredicted RBP11.26□□□□□ -0.61
GPN1-202ENST00000407583 NCBP3Q53F19 620 aaKnown RBP11.26□□□□□ -0.61
GPN1-202ENST00000407583 RPGRQ92834 1020 aaKnown RBP11.26□□□□□ -0.61
GPN1-202ENST00000407583 NIP7Q9Y221 180 aaKnown RBP eCLIP11.26□□□□□ -0.61
GPN1-202ENST00000407583 NR2E3Q9Y5X4 410 aa11.26□□□□□ -0.61
GPN1-202ENST00000407583 PTCH2Q9Y6C5 1203 aa11.26□□□□□ -0.61
GPN1-202ENST00000407583 RPTORQ8N122 1335 aa11.25□□□□□ -0.61
GPN1-202ENST00000407583 ZNF521Q96K83 1311 aa11.25□□□□□ -0.61
GPN1-202ENST00000407583 RIC1Q4ADV7 1423 aa11.25□□□□□ -0.61
GPN1-202ENST00000407583 HOXA10P31260 410 aaPredicted RBP11.25□□□□□ -0.61
GPN1-202ENST00000407583 GOLGA2Q08379 1002 aa11.25□□□□□ -0.61
GPN1-202ENST00000407583 CLEC4GQ6UXB4 293 aa11.25□□□□□ -0.61
GPN1-202ENST00000407583 NPM2Q86SE8 214 aaKnown RBP11.25□□□□□ -0.61
GPN1-202ENST00000407583 NBPF11Q86T75 865 aa11.25□□□□□ -0.61
GPN1-202ENST00000407583 DPF2Q92785 391 aa11.25□□□□□ -0.61
GPN1-202ENST00000407583 KNSTRNQ9Y448 316 aa11.25□□□□□ -0.61
GPN1-202ENST00000407583 ALDH1A1P00352 501 aa11.24□□□□□ -0.61
GPN1-202ENST00000407583 PIP4K2AP48426 406 aaPredicted RBP11.24□□□□□ -0.61
GPN1-202ENST00000407583 KIAA2012Q0VF49 1180 aa11.24□□□□□ -0.61
GPN1-202ENST00000407583 KIF4BQ2VIQ3 1234 aa11.24□□□□□ -0.61
GPN1-202ENST00000407583 HTATIP2Q9BUP3 242 aa11.24□□□□□ -0.61
GPN1-202ENST00000407583 RTFDC1Q9BY42 306 aaPredicted RBP11.24□□□□□ -0.61
GPN1-202ENST00000407583 MAPK8IP3Q9UPT6 1336 aa11.23□□□□□ -0.61
GPN1-202ENST00000407583 TMEM265A0A087WTH1 108 aa11.23□□□□□ -0.61
GPN1-202ENST00000407583 PSMD14O00487 310 aa11.23□□□□□ -0.61
GPN1-202ENST00000407583 RNMTO43148 476 aaKnown RBP11.23□□□□□ -0.61
GPN1-202ENST00000407583 GTF2E1P29083 439 aaPredicted RBP11.23□□□□□ -0.61
GPN1-202ENST00000407583 GSE1Q14687 1217 aa11.23□□□□□ -0.61
GPN1-202ENST00000407583 UBE2Q1Q7Z7E8 422 aa11.23□□□□□ -0.61
GPN1-202ENST00000407583 NUTM1Q86Y26 1132 aa11.23□□□□□ -0.61
GPN1-202ENST00000407583 SH3TC2Q8TF17 1288 aa11.23□□□□□ -0.61
GPN1-202ENST00000407583 ZNF496Q96IT1 587 aaPredicted RBP11.23□□□□□ -0.61
GPN1-202ENST00000407583 CRBNQ96SW2 442 aa11.23□□□□□ -0.61
GPN1-202ENST00000407583 PANK3Q9H999 370 aa11.23□□□□□ -0.61
GPN1-202ENST00000407583 ZNF652Q9Y2D9 606 aa11.23□□□□□ -0.61
GPN1-202ENST00000407583 HEG1Q9ULI3 1381 aa11.22□□□□□ -0.61
GPN1-202ENST00000407583 ANGEL2Q5VTE6 544 aaKnown RBP11.22□□□□□ -0.61
GPN1-202ENST00000407583 IFNL1Q8IU54 200 aa11.22□□□□□ -0.61
GPN1-202ENST00000407583 SUPT20HQ8NEM7 779 aa11.22□□□□□ -0.61
GPN1-202ENST00000407583 GUCD1Q96NT3 240 aa11.22□□□□□ -0.61
GPN1-202ENST00000407583 SCAF8Q9UPN6 1271 aaKnown RBP11.22□□□□□ -0.61
GPN1-202ENST00000407583 KDM3BQ7LBC6 1761 aa11.22□□□□□ -0.61
GPN1-202ENST00000407583 IGF2BP3O00425 579 aaKnown RBP eCLIP11.21□□□□□ -0.61
GPN1-202ENST00000407583 TTC5Q8N0Z6 440 aa11.21□□□□□ -0.61
GPN1-202ENST00000407583 ATP6V0A2Q9Y487 856 aa11.21□□□□□ -0.61
GPN1-202ENST00000407583 CACNA1AO00555 2505 aa11.21□□□□□ -0.61
GPN1-202ENST00000407583 E9PSI1 815 aa11.2□□□□□ -0.62
GPN1-202ENST00000407583 BCAMP50895 628 aa11.2□□□□□ -0.62
GPN1-202ENST00000407583 MAP3K12Q12852 859 aa11.2□□□□□ -0.62
GPN1-202ENST00000407583 CRHR2Q13324 411 aa11.2□□□□□ -0.62
GPN1-202ENST00000407583 TTLL12Q14166 644 aaPredicted RBP11.2□□□□□ -0.62
GPN1-202ENST00000407583 PDE3AQ14432 1141 aa11.2□□□□□ -0.62
GPN1-202ENST00000407583 LRIT3Q3SXY7 679 aa11.2□□□□□ -0.62
GPN1-202ENST00000407583 PRAMEF18Q5VWM3 479 aa11.2□□□□□ -0.62
GPN1-202ENST00000407583 DUSP27Q5VZP5 1158 aa11.2□□□□□ -0.62
GPN1-202ENST00000407583 DPP8Q6V1X1 898 aaPredicted RBP11.2□□□□□ -0.62
GPN1-202ENST00000407583 TRMT2AQ8IZ69 625 aaKnown RBP11.2□□□□□ -0.62
GPN1-202ENST00000407583 RBM17Q96I25 401 aaKnown RBP11.2□□□□□ -0.62
GPN1-202ENST00000407583 CRAMP1Q96RY5 1269 aa11.2□□□□□ -0.62
GPN1-202ENST00000407583 CARD14Q9BXL6 1004 aa11.2□□□□□ -0.62
GPN1-202ENST00000407583 PPP2R1AP30153 589 aa11.19□□□□□ -0.62
GPN1-202ENST00000407583 SP3Q02447 781 aa11.19□□□□□ -0.62
GPN1-202ENST00000407583 BECN1Q14457 450 aa11.19□□□□□ -0.62
GPN1-202ENST00000407583 SPRYD7Q5W111 196 aa11.19□□□□□ -0.62
GPN1-202ENST00000407583 C3orf67Q6ZVT6 689 aa11.19□□□□□ -0.62
GPN1-202ENST00000407583 TEX13AQ9BXU3 409 aaPredicted RBP11.19□□□□□ -0.62
GPN1-202ENST00000407583 TNFRSF10AO00220 468 aa11.18□□□□□ -0.62
GPN1-202ENST00000407583 RPS12P25398 132 aaKnown RBP11.18□□□□□ -0.62
GPN1-202ENST00000407583 PTPN12Q05209 780 aaKnown RBP11.18□□□□□ -0.62
GPN1-202ENST00000407583 SLFN5Q08AF3 891 aa11.18□□□□□ -0.62
GPN1-202ENST00000407583 MTFR1Q15390 333 aa11.18□□□□□ -0.62
GPN1-202ENST00000407583 GDF15Q99988 308 aa11.18□□□□□ -0.62
GPN1-202ENST00000407583 TMX4Q9H1E5 349 aaPredicted RBP11.18□□□□□ -0.62
GPN1-202ENST00000407583 EVI5O60447 810 aa11.17□□□□□ -0.62
GPN1-202ENST00000407583 BMP8BP34820 402 aa11.17□□□□□ -0.62
GPN1-202ENST00000407583 TCIRG1Q13488 830 aa11.17□□□□□ -0.62
GPN1-202ENST00000407583 SCARF1Q14162 830 aa11.17□□□□□ -0.62
GPN1-202ENST00000407583 HLFQ16534 295 aa11.17□□□□□ -0.62
GPN1-202ENST00000407583 AMER1Q5JTC6 1135 aaPredicted RBP11.17□□□□□ -0.62
GPN1-202ENST00000407583 CC2D1BQ5T0F9 858 aaKnown RBP11.17□□□□□ -0.62
GPN1-202ENST00000407583 SULT6B1Q6IMI4 303 aa11.17□□□□□ -0.62
GPN1-202ENST00000407583 SYMPKQ92797 1274 aaKnown RBP11.17□□□□□ -0.62
GPN1-202ENST00000407583 CDCA7LQ96GN5 454 aa11.17□□□□□ -0.62
GPN1-202ENST00000407583 KCNQ5Q9NR82 932 aa11.17□□□□□ -0.62
GPN1-202ENST00000407583 SYNGAP1Q96PV0 1343 aa11.17□□□□□ -0.62
GPN1-202ENST00000407583 IRS2Q9Y4H2 1338 aa11.17□□□□□ -0.62
GPN1-202ENST00000407583 DUOX1Q9NRD9 1551 aa11.17□□□□□ -0.62
GPN1-202ENST00000407583 RTL9Q8NET4 1388 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms