RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 ASIC1P78348 528 aa13.18□□□□□ -0.3
HLCS-202ENST00000399120 PRPF31Q8WWY3 499 aaKnown RBP13.18□□□□□ -0.3
HLCS-202ENST00000399120 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.18□□□□□ -0.3
HLCS-202ENST00000399120 CCDC25Q86WR0 208 aa13.18□□□□□ -0.3
HLCS-202ENST00000399120 EPSTI1Q96J88 318 aa13.18□□□□□ -0.3
HLCS-202ENST00000399120 GEN1Q17RS7 908 aa13.18□□□□□ -0.3
HLCS-202ENST00000399120 MAK16Q9BXY0 300 aaKnown RBP13.18□□□□□ -0.3
HLCS-202ENST00000399120 ECHDC1Q9NTX5 307 aa13.18□□□□□ -0.3
HLCS-202ENST00000399120 ZEB2O60315 1214 aa13.18□□□□□ -0.3
HLCS-202ENST00000399120 INTS8Q75QN2 995 aaKnown RBP13.18□□□□□ -0.3
HLCS-202ENST00000399120 VPS52Q8N1B4 723 aa13.18□□□□□ -0.3
HLCS-202ENST00000399120 ARFGAP2Q8N6H7 521 aa13.18□□□□□ -0.3
HLCS-202ENST00000399120 STX8Q9UNK0 236 aa13.18□□□□□ -0.3
HLCS-202ENST00000399120 NAA25Q14CX7 972 aa13.17□□□□□ -0.3
HLCS-202ENST00000399120 GIMAP6Q6P9H5 292 aa13.17□□□□□ -0.3
HLCS-202ENST00000399120 HFM1A2PYH4 1435 aa13.17□□□□□ -0.3
HLCS-202ENST00000399120 GPTP24298 496 aa13.17□□□□□ -0.3
HLCS-202ENST00000399120 HEATR3Q7Z4Q2 680 aa13.17□□□□□ -0.3
HLCS-202ENST00000399120 NBPF11Q86T75 865 aa13.17□□□□□ -0.3
HLCS-202ENST00000399120 KCNG4Q8TDN1 519 aa13.17□□□□□ -0.3
HLCS-202ENST00000399120 TLDC2A0PJX2 215 aa13.17□□□□□ -0.3
HLCS-202ENST00000399120 IFIT1BQ5T764 474 aaKnown RBP13.17□□□□□ -0.3
HLCS-202ENST00000399120 CASQ2O14958 399 aaPredicted RBP13.17□□□□□ -0.3
HLCS-202ENST00000399120 HSP90AA4PQ58FG1 418 aa13.17□□□□□ -0.3
HLCS-202ENST00000399120 LDHAL6AQ6ZMR3 332 aa13.17□□□□□ -0.3
HLCS-202ENST00000399120 KRT23Q9C075 422 aa13.17□□□□□ -0.3
HLCS-202ENST00000399120 MROH2BQ7Z745 1585 aa13.17□□□□□ -0.3
HLCS-202ENST00000399120 CAPZA3Q96KX2 299 aa13.17□□□□□ -0.3
HLCS-202ENST00000399120 THUMPD2Q9BTF0 503 aaKnown RBP13.17□□□□□ -0.3
HLCS-202ENST00000399120 ANO6Q4KMQ2 910 aa13.16□□□□□ -0.3
HLCS-202ENST00000399120 SEPT14Q6ZU15 432 aa13.16□□□□□ -0.3
HLCS-202ENST00000399120 HAUS7Q99871 368 aa13.16□□□□□ -0.3
HLCS-202ENST00000399120 F6X3S4 739 aa13.16□□□□□ -0.3
HLCS-202ENST00000399120 HCLS1P14317 486 aaPredicted RBP13.16□□□□□ -0.3
HLCS-202ENST00000399120 TUBB4BP68371 445 aa13.16□□□□□ -0.3
HLCS-202ENST00000399120 ERCC6LQ2NKX8 1250 aa13.16□□□□□ -0.3
HLCS-202ENST00000399120 IFT81Q8WYA0 676 aa13.16□□□□□ -0.3
HLCS-202ENST00000399120 VPS18Q9P253 973 aa13.16□□□□□ -0.3
HLCS-202ENST00000399120 TACC3Q9Y6A5 838 aa13.16□□□□□ -0.3
HLCS-202ENST00000399120 NEK11Q8NG66 645 aa13.16□□□□□ -0.3
HLCS-202ENST00000399120 ALG1Q9BT22 464 aa13.16□□□□□ -0.3
HLCS-202ENST00000399120 C6orf50Q9HD87 102 aa13.16□□□□□ -0.3
HLCS-202ENST00000399120 SNRKQ9NRH2 765 aa13.16□□□□□ -0.3
HLCS-202ENST00000399120 PPFIA3O75145 1194 aa13.16□□□□□ -0.3
HLCS-202ENST00000399120 TBC1D2Q9BYX2 928 aa13.16□□□□□ -0.3
HLCS-202ENST00000399120 KLF18A0A0U1RQI7 1052 aa13.16□□□□□ -0.3
HLCS-202ENST00000399120 RFC1P35251 1148 aaPredicted RBP13.16□□□□□ -0.3
HLCS-202ENST00000399120 INF2Q27J81 1249 aa13.16□□□□□ -0.3
HLCS-202ENST00000399120 ZSCAN23Q3MJ62 389 aa13.16□□□□□ -0.3
HLCS-202ENST00000399120 FAM184BQ9ULE4 1060 aa13.16□□□□□ -0.3
HLCS-202ENST00000399120 ZBTB43O43298 467 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 CALM1P0DP23 149 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 CALM2P0DP24 149 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 CALM3P0DP25 149 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 SMARCC2Q8TAQ2 1214 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 CCDC42Q96M95 316 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 MTUS1Q9ULD2 1270 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 TUBB4AP04350 444 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 VCX3BQ9H321 246 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 DBF4Q9UBU7 674 aaPredicted RBP13.15□□□□□ -0.3
HLCS-202ENST00000399120 SYT1P21579 422 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 CALCOCO2Q13137 446 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 B4DLN1 442 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 UQCRFS1P1P0C7P4 283 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 GNAQP50148 359 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 VAV2P52735 878 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 MRPL12P52815 198 aaKnown RBP13.15□□□□□ -0.3
HLCS-202ENST00000399120 ATP11AP98196 1134 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 TMTC2Q8N394 836 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 AFAP1Q8N556 730 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 ZNF622Q969S3 477 aaKnown RBP eCLIP13.15□□□□□ -0.3
HLCS-202ENST00000399120 NKIRAS1Q9NYS0 192 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 SWAP70Q9UH65 585 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 NSD3Q9BZ95 1437 aa13.15□□□□□ -0.3
HLCS-202ENST00000399120 ATP5DP30049 168 aa13.15□□□□□ -0.31
HLCS-202ENST00000399120 RTN1Q16799 776 aa13.15□□□□□ -0.31
HLCS-202ENST00000399120 DNAJC21Q5F1R6 531 aaKnown RBP13.15□□□□□ -0.31
HLCS-202ENST00000399120 PPP1R42Q7Z4L9 355 aa13.15□□□□□ -0.31
HLCS-202ENST00000399120 CLUL1Q15846 466 aa13.14□□□□□ -0.31
HLCS-202ENST00000399120 CEP85LQ5SZL2 805 aa13.14□□□□□ -0.31
HLCS-202ENST00000399120 CACNA2D3Q8IZS8 1091 aa13.14□□□□□ -0.31
HLCS-202ENST00000399120 ZMYND15Q9H091 742 aa13.14□□□□□ -0.31
HLCS-202ENST00000399120 HSPA1LP34931 641 aa13.14□□□□□ -0.31
HLCS-202ENST00000399120 TNNC1P63316 161 aa13.14□□□□□ -0.31
HLCS-202ENST00000399120 RASA3Q14644 834 aa13.14□□□□□ -0.31
HLCS-202ENST00000399120 AOPEPQ8N6M6 819 aa13.14□□□□□ -0.31
HLCS-202ENST00000399120 LUC7L2Q9Y383 392 aaKnown RBP13.14□□□□□ -0.31
HLCS-202ENST00000399120 BICDL2A1A5D9 508 aa13.14□□□□□ -0.31
HLCS-202ENST00000399120 ZSCAN22P10073 491 aaPredicted RBP13.14□□□□□ -0.31
HLCS-202ENST00000399120 NEDD9Q14511 834 aa13.14□□□□□ -0.31
HLCS-202ENST00000399120 UAP1Q16222 522 aaPredicted RBP13.14□□□□□ -0.31
HLCS-202ENST00000399120 GBP6Q6ZN66 633 aa13.14□□□□□ -0.31
HLCS-202ENST00000399120 ZBTB3Q9H5J0 574 aa13.14□□□□□ -0.31
HLCS-202ENST00000399120 CPSF2Q9P2I0 782 aaKnown RBP13.14□□□□□ -0.31
HLCS-202ENST00000399120 SARNPP82979 210 aaKnown RBP13.14□□□□□ -0.31
HLCS-202ENST00000399120 NOLC1Q14978 699 aaKnown RBP eCLIP13.14□□□□□ -0.31
HLCS-202ENST00000399120 SEL1L2Q5TEA6 688 aa13.14□□□□□ -0.31
HLCS-202ENST00000399120 GBP7Q8N8V2 638 aaPredicted RBP13.14□□□□□ -0.31
HLCS-202ENST00000399120 UBLCP1Q8WVY7 318 aaPredicted RBP13.14□□□□□ -0.31
HLCS-202ENST00000399120 MRPS27Q92552 414 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms