RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 ADORA1P30542 326 aa28.08■■■□□ 2.09
CDH23-206ENST00000398842 SETDB2Q96T68 719 aa28.08■■■□□ 2.09
CDH23-206ENST00000398842 DNAJC2Q99543 621 aaKnown RBP28.08■■■□□ 2.09
CDH23-206ENST00000398842 NDUFB9Q9Y6M9 179 aa28.08■■■□□ 2.09
CDH23-206ENST00000398842 CD2BP2O95400 341 aaKnown RBP28.07■■■□□ 2.08
CDH23-206ENST00000398842 ADRA2BP18089 450 aa28.07■■■□□ 2.08
CDH23-206ENST00000398842 ANAPC15P60006 121 aa28.07■■■□□ 2.08
CDH23-206ENST00000398842 NMIQ13287 307 aaPredicted RBP28.07■■■□□ 2.08
CDH23-206ENST00000398842 ATP2B3Q16720 1220 aa28.07■■■□□ 2.08
CDH23-206ENST00000398842 PDE8BO95263 885 aa28.06■■■□□ 2.08
CDH23-206ENST00000398842 RFC4P35249 363 aa28.06■■■□□ 2.08
CDH23-206ENST00000398842 SF3B3Q15393 1217 aaKnown RBP28.06■■■□□ 2.08
CDH23-206ENST00000398842 FAM227BQ96M60 508 aa28.06■■■□□ 2.08
CDH23-206ENST00000398842 NYXQ9GZU5 481 aa28.06■■■□□ 2.08
CDH23-206ENST00000398842 MROH5Q6ZUA9 1318 aa28.06■■■□□ 2.08
CDH23-206ENST00000398842 PHF14O94880 888 aa28.06■■■□□ 2.08
CDH23-206ENST00000398842 APBA3O96018 575 aa28.06■■■□□ 2.08
CDH23-206ENST00000398842 HSPA4P34932 840 aa28.06■■■□□ 2.08
CDH23-206ENST00000398842 ABCC12Q96J65 1359 aa28.05■■■□□ 2.08
CDH23-206ENST00000398842 KIAA1211Q6ZU35 1233 aa28.05■■■□□ 2.08
CDH23-206ENST00000398842 PALD1Q9ULE6 856 aa28.05■■■□□ 2.08
CDH23-206ENST00000398842 ARAP2Q8WZ64 1704 aa28.05■■■□□ 2.08
CDH23-206ENST00000398842 IFIT1P09914 478 aaKnown RBP28.04■■■□□ 2.08
CDH23-206ENST00000398842 CCDC158Q5M9N0 1113 aa28.04■■■□□ 2.08
CDH23-206ENST00000398842 C3orf67Q6ZVT6 689 aa28.04■■■□□ 2.08
CDH23-206ENST00000398842 KBTBD3Q8NAB2 608 aa28.04■■■□□ 2.08
CDH23-206ENST00000398842 PAG1Q9NWQ8 432 aa28.04■■■□□ 2.08
CDH23-206ENST00000398842 COL4A1P02462 1669 aa28.03■■■□□ 2.08
CDH23-206ENST00000398842 A0A0D9SFI3 127 aa28.03■■■□□ 2.08
CDH23-206ENST00000398842 DDX46Q7L014 1031 aaKnown RBP28.03■■■□□ 2.08
CDH23-206ENST00000398842 TICAM2Q86XR7 235 aa28.03■■■□□ 2.08
CDH23-206ENST00000398842 MPHOSPH8Q99549 860 aa28.03■■■□□ 2.08
CDH23-206ENST00000398842 ANP32EQ9BTT0 268 aa28.03■■■□□ 2.08
CDH23-206ENST00000398842 MED23Q9ULK4 1368 aa28.02■■■□□ 2.08
CDH23-206ENST00000398842 GORABQ5T7V8 394 aa28.02■■■□□ 2.08
CDH23-206ENST00000398842 NBPF5PQ86XG9 351 aaPredicted RBP28.02■■■□□ 2.08
CDH23-206ENST00000398842 PROM2Q8N271 834 aa28.02■■■□□ 2.08
CDH23-206ENST00000398842 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.01■■■□□ 2.08
CDH23-206ENST00000398842 FGFR2P21802 821 aa28.01■■■□□ 2.08
CDH23-206ENST00000398842 IGHMBP2P38935 993 aaKnown RBP28.01■■■□□ 2.08
CDH23-206ENST00000398842 TTC39AQ5SRH9 613 aa28.01■■■□□ 2.08
CDH23-206ENST00000398842 ANTXR1Q9H6X2 564 aa28.01■■■□□ 2.08
CDH23-206ENST00000398842 GOLIM4O00461 696 aa28.01■■■□□ 2.07
CDH23-206ENST00000398842 GTF2E1P29083 439 aaPredicted RBP28.01■■■□□ 2.07
CDH23-206ENST00000398842 PTH1RQ03431 593 aa28.01■■■□□ 2.07
CDH23-206ENST00000398842 TXNRD1Q16881 649 aa28.01■■■□□ 2.07
CDH23-206ENST00000398842 K7ELQ4 463 aaPredicted RBP28■■■□□ 2.07
CDH23-206ENST00000398842 PUM3Q15397 648 aaKnown RBP28■■■□□ 2.07
CDH23-206ENST00000398842 TPTE2Q6XPS3 522 aa28■■■□□ 2.07
CDH23-206ENST00000398842 AKAP11Q9UKA4 1901 aa27.99■■■□□ 2.07
CDH23-206ENST00000398842 SSFA2P28290 1259 aa27.99■■■□□ 2.07
CDH23-206ENST00000398842 CDC5LQ99459 802 aaKnown RBP27.99■■■□□ 2.07
CDH23-206ENST00000398842 TAF1P21675 1872 aa27.99■■■□□ 2.07
CDH23-206ENST00000398842 CCDC171Q6TFL3 1326 aa27.99■■■□□ 2.07
CDH23-206ENST00000398842 ZNF512BQ96KM6 892 aaPredicted RBP27.99■■■□□ 2.07
CDH23-206ENST00000398842 A0A1B0GUL6 1792 aa27.98■■■□□ 2.07
CDH23-206ENST00000398842 TNS1Q9HBL0 1735 aaKnown RBP27.98■■■□□ 2.07
CDH23-206ENST00000398842 HMGB2P26583 209 aaKnown RBP27.98■■■□□ 2.07
CDH23-206ENST00000398842 HELBQ8NG08 1087 aaPredicted RBP27.98■■■□□ 2.07
CDH23-206ENST00000398842 LPIN2Q92539 896 aa27.98■■■□□ 2.07
CDH23-206ENST00000398842 SLKQ9H2G2 1235 aaPredicted RBP27.98■■■□□ 2.07
CDH23-206ENST00000398842 PLSCR1O15162 318 aa27.97■■■□□ 2.07
CDH23-206ENST00000398842 CARMIL3Q8ND23 1372 aa27.97■■■□□ 2.07
CDH23-206ENST00000398842 ST18O60284 1047 aa27.96■■■□□ 2.07
CDH23-206ENST00000398842 SCARF1Q14162 830 aa27.96■■■□□ 2.07
CDH23-206ENST00000398842 NFIXQ14938 502 aa27.96■■■□□ 2.07
CDH23-206ENST00000398842 SPRYD3Q8NCJ5 442 aa27.96■■■□□ 2.07
CDH23-206ENST00000398842 MAP4K1Q92918 833 aa27.96■■■□□ 2.07
CDH23-206ENST00000398842 NLRP3Q96P20 1036 aa27.96■■■□□ 2.07
CDH23-206ENST00000398842 ZNF589Q86UQ0 364 aaPredicted RBP27.95■■■□□ 2.06
CDH23-206ENST00000398842 KCNB2Q92953 911 aa27.95■■■□□ 2.06
CDH23-206ENST00000398842 SNX14Q9Y5W7 946 aa27.95■■■□□ 2.06
CDH23-206ENST00000398842 CHGBP05060 677 aa27.94■■■□□ 2.06
CDH23-206ENST00000398842 ANKRD18AQ8IVF6 992 aa27.94■■■□□ 2.06
CDH23-206ENST00000398842 TAF5LO75529 589 aa27.94■■■□□ 2.06
CDH23-206ENST00000398842 GYS1P13807 737 aa27.94■■■□□ 2.06
CDH23-206ENST00000398842 SLC5A1P13866 664 aa27.94■■■□□ 2.06
CDH23-206ENST00000398842 FKBP4Q02790 459 aaKnown RBP eCLIP27.94■■■□□ 2.06
CDH23-206ENST00000398842 TNRC6CQ9HCJ0 1690 aaKnown RBP27.93■■■□□ 2.06
CDH23-206ENST00000398842 NEK4P51957 841 aa27.93■■■□□ 2.06
CDH23-206ENST00000398842 CHRNDQ07001 517 aa27.93■■■□□ 2.06
CDH23-206ENST00000398842 NECTIN1Q15223 517 aa27.93■■■□□ 2.06
CDH23-206ENST00000398842 RASEFQ8IZ41 740 aa27.93■■■□□ 2.06
CDH23-206ENST00000398842 BSDC1Q9NW68 430 aaPredicted RBP27.93■■■□□ 2.06
CDH23-206ENST00000398842 ARID4AP29374 1257 aaPredicted RBP27.92■■■□□ 2.06
CDH23-206ENST00000398842 MCAMP43121 646 aa27.92■■■□□ 2.06
CDH23-206ENST00000398842 ZAP70P43403 619 aa27.92■■■□□ 2.06
CDH23-206ENST00000398842 MCMDC2Q4G0Z9 681 aa27.92■■■□□ 2.06
CDH23-206ENST00000398842 CCDC102BQ68D86 513 aa27.92■■■□□ 2.06
CDH23-206ENST00000398842 IL27Q8NEV9 243 aa27.92■■■□□ 2.06
CDH23-206ENST00000398842 RBM8AQ9Y5S9 174 aaKnown RBP27.91■■■□□ 2.06
CDH23-206ENST00000398842 MYH7P12883 1935 aa27.91■■■□□ 2.06
CDH23-206ENST00000398842 PHKA1P46020 1223 aa27.91■■■□□ 2.06
CDH23-206ENST00000398842 ZMYM1Q5SVZ6 1142 aa27.91■■■□□ 2.06
CDH23-206ENST00000398842 CCDC24Q8N4L8 307 aa27.91■■■□□ 2.06
CDH23-206ENST00000398842 SEC62Q99442 399 aaKnown RBP27.91■■■□□ 2.06
CDH23-206ENST00000398842 HELLSQ9NRZ9 838 aa27.91■■■□□ 2.06
CDH23-206ENST00000398842 SNAP23O00161 211 aa27.9■■■□□ 2.06
CDH23-206ENST00000398842 UQCRFS1P1P0C7P4 283 aa27.9■■■□□ 2.06
CDH23-206ENST00000398842 EN1Q05925 392 aaPredicted RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms