RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 EP400NLQ6ZTU2 488 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 SCAND2PQ9GZW5 306 aaPredicted RBP3.12□□□□□ -1.91
CHD9-202ENST00000398510 TSPYL1Q9H0U9 437 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 TCP11L1Q9NUJ3 509 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 FAM8A1Q9UBU6 413 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 MKRN1Q9UHC7 482 aaKnown RBP3.12□□□□□ -1.91
CHD9-202ENST00000398510 ZSCAN12O43309 604 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 EIF6P56537 245 aaKnown RBP3.12□□□□□ -1.91
CHD9-202ENST00000398510 YWHAEP62258 255 aaKnown RBP3.12□□□□□ -1.91
CHD9-202ENST00000398510 PPP2R3CQ969Q6 453 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 E9PCH4 1651 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 A6NNZ2 444 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 HOXC6P09630 235 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 MMP14P50281 582 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 TUBB8Q3ZCM7 444 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 DCAF15Q66K64 600 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 CATIPQ7Z7H3 387 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 PPFIBP1Q86W92 1011 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 CALML4Q96GE6 196 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 SDF4Q9BRK5 362 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 LCMT1Q9UIC8 334 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 WDR33Q9C0J8 1336 aaKnown RBP3.12□□□□□ -1.91
CHD9-202ENST00000398510 MAP3K7O43318 606 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 NBR1Q14596 966 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 TBC1D31Q96DN5 1066 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 FMNL2Q96PY5 1086 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 KNDC1Q76NI1 1749 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 IBTKQ9P2D0 1353 aaPredicted RBP3.12□□□□□ -1.91
CHD9-202ENST00000398510 GLI2P10070 1586 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 HSPA5P11021 654 aaKnown RBP3.12□□□□□ -1.91
CHD9-202ENST00000398510 CFAP70Q5T0N1 1121 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 ATL3Q6DD88 541 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 ZNF530Q6P9A1 599 aaPredicted RBP3.12□□□□□ -1.91
CHD9-202ENST00000398510 C6orf50Q9HD87 102 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 ABCC3O15438 1527 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 ZEB2O60315 1214 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 ALDH3A1P30838 453 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 PPM1FP49593 454 aaPredicted RBP3.12□□□□□ -1.91
CHD9-202ENST00000398510 MNAT1P51948 309 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 C19orf44Q9H6X5 657 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 DBF4Q9UBU7 674 aaPredicted RBP3.12□□□□□ -1.91
CHD9-202ENST00000398510 FAM184BQ9ULE4 1060 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 RABGAP1Q9Y3P9 1069 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 CPS1P31327 1500 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 GOLGA8QA0A0J9YX86 632 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 GOLGA8OA6NCC3 632 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 SPDYE3A6NKU9 549 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 GOLGA8NF8WBI6 632 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 NEMFO60524 1076 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 STK10O94804 968 aaKnown RBP3.12□□□□□ -1.91
CHD9-202ENST00000398510 PARP10Q53GL7 1025 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 NAP1L3Q99457 506 aaPredicted RBP3.12□□□□□ -1.91
CHD9-202ENST00000398510 ZMYND15Q9H091 742 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.12□□□□□ -1.91
CHD9-202ENST00000398510 NEURL4Q96JN8 1562 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 DUOX1Q9NRD9 1551 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 PIK3C2AO00443 1686 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 UQCRFS1P1P0C7P4 283 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 P4HA1P13674 534 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 KRT85P78386 507 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 AIMP1Q12904 312 aaKnown RBP3.12□□□□□ -1.91
CHD9-202ENST00000398510 HDGFL1Q5TGJ6 251 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 ANKRD45Q5TZF3 282 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 ZSCAN29Q8IWY8 852 aaPredicted RBP3.12□□□□□ -1.91
CHD9-202ENST00000398510 CLUAP1Q96AJ1 413 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 TSGA10Q9BZW7 698 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 PARP3Q9Y6F1 533 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 RNF123Q5XPI4 1314 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 WDR17Q8IZU2 1322 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 SRPRBQ9Y5M8 271 aaKnown RBP3.12□□□□□ -1.91
CHD9-202ENST00000398510 MROH1Q8NDA8 1641 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 ARHGAP31Q2M1Z3 1444 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 CCDC194A0A1B0GVG4 234 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 TAF11Q15544 211 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 PDILTQ8N807 584 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 CEP126Q9P2H0 1117 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 UBR1Q8IWV7 1749 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 FOSBP53539 338 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 NBPF6Q5VWK0 638 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 TAOK1Q7L7X3 1001 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 NBPF5PQ86XG9 351 aaPredicted RBP3.11□□□□□ -1.91
CHD9-202ENST00000398510 KIFAP3Q92845 792 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 NBPF4Q96M43 638 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 NAPBQ9H115 298 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.11□□□□□ -1.91
CHD9-202ENST00000398510 MAGI3Q5TCQ9 1506 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 STX10O60499 249 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 IGSF3O75054 1194 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 TUBBP07437 444 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 EIF2S2P20042 333 aaKnown RBP3.11□□□□□ -1.91
CHD9-202ENST00000398510 CTNNA2P26232 953 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 NASPP49321 788 aaPredicted RBP3.11□□□□□ -1.91
CHD9-202ENST00000398510 PLCB4Q15147 1175 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 TICAM2Q86XR7 235 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 ANKS4BQ8N8V4 417 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 SOS2Q07890 1332 aaPredicted RBP3.11□□□□□ -1.91
CHD9-202ENST00000398510 BICDL2A1A5D9 508 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 GNA11P29992 359 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 ZNF277Q9NRM2 450 aaPredicted RBP3.11□□□□□ -1.91
CHD9-202ENST00000398510 ATP8B3O60423 1300 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms