RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 TSPY3P0CV98 308 aa17.94■□□□□ 0.46
GNE-202ENST00000396594 TSPY8P0CW00 308 aa17.94■□□□□ 0.46
GNE-202ENST00000396594 SCLT1Q96NL6 688 aa17.94■□□□□ 0.46
GNE-202ENST00000396594 SEPT11Q9NVA2 429 aaKnown RBP17.94■□□□□ 0.46
GNE-202ENST00000396594 CLASP1Q7Z460 1538 aa17.93■□□□□ 0.46
GNE-202ENST00000396594 GCP02774 474 aa17.93■□□□□ 0.46
GNE-202ENST00000396594 PLBD2Q8NHP8 589 aa17.93■□□□□ 0.46
GNE-202ENST00000396594 PDE6BP35913 854 aa17.93■□□□□ 0.46
GNE-202ENST00000396594 IFIT1BQ5T764 474 aaKnown RBP17.93■□□□□ 0.46
GNE-202ENST00000396594 PLEKHG3A1L390 1219 aa17.93■□□□□ 0.46
GNE-202ENST00000396594 CALRP27797 417 aaKnown RBP17.93■□□□□ 0.46
GNE-202ENST00000396594 GNA11P29992 359 aa17.93■□□□□ 0.46
GNE-202ENST00000396594 MCTP2Q6DN12 878 aa17.93■□□□□ 0.46
GNE-202ENST00000396594 COPS6Q7L5N1 327 aa17.93■□□□□ 0.46
GNE-202ENST00000396594 SPC24Q8NBT2 197 aa17.93■□□□□ 0.46
GNE-202ENST00000396594 MYOM2P54296 1465 aa17.93■□□□□ 0.46
GNE-202ENST00000396594 TTC6Q86TZ1 520 aa17.93■□□□□ 0.46
GNE-202ENST00000396594 DZIP3Q86Y13 1208 aaKnown RBP17.93■□□□□ 0.46
GNE-202ENST00000396594 UBAP1LF5GYI3 381 aa17.92■□□□□ 0.46
GNE-202ENST00000396594 ZSCAN22P10073 491 aaPredicted RBP17.92■□□□□ 0.46
GNE-202ENST00000396594 ARID3AQ99856 593 aa17.92■□□□□ 0.46
GNE-202ENST00000396594 TAF3Q5VWG9 929 aa17.92■□□□□ 0.46
GNE-202ENST00000396594 CYP7A1P22680 504 aa17.92■□□□□ 0.46
GNE-202ENST00000396594 CASQ1P31415 396 aa17.92■□□□□ 0.46
GNE-202ENST00000396594 TMEM2Q9UHN6 1383 aa17.92■□□□□ 0.46
GNE-202ENST00000396594 CRACR2AQ9BSW2 395 aa17.92■□□□□ 0.46
GNE-202ENST00000396594 MAGEB6P1A0A0J9YX57 407 aa17.92■□□□□ 0.46
GNE-202ENST00000396594 ESPNB1AK53 854 aa17.92■□□□□ 0.46
GNE-202ENST00000396594 EXOC1Q9NV70 894 aa17.92■□□□□ 0.46
GNE-202ENST00000396594 PAG1Q9NWQ8 432 aa17.92■□□□□ 0.46
GNE-202ENST00000396594 ZMYM4Q5VZL5 1548 aa17.91■□□□□ 0.46
GNE-202ENST00000396594 DKC1O60832 514 aaKnown RBP eCLIP17.91■□□□□ 0.46
GNE-202ENST00000396594 GPTP24298 496 aa17.91■□□□□ 0.46
GNE-202ENST00000396594 CKAP4Q07065 602 aaKnown RBP17.91■□□□□ 0.46
GNE-202ENST00000396594 BICDL2A1A5D9 508 aa17.91■□□□□ 0.46
GNE-202ENST00000396594 KDM4AO75164 1064 aa17.91■□□□□ 0.46
GNE-202ENST00000396594 FLAD1Q8NFF5 587 aa17.91■□□□□ 0.46
GNE-202ENST00000396594 TUBBP07437 444 aa17.9■□□□□ 0.46
GNE-202ENST00000396594 MTIF2P46199 727 aaKnown RBP17.9■□□□□ 0.46
GNE-202ENST00000396594 CCDC40Q4G0X9 1142 aa17.9■□□□□ 0.46
GNE-202ENST00000396594 CCDC174Q6PII3 467 aa17.9■□□□□ 0.46
GNE-202ENST00000396594 TBC1D5Q92609 795 aa17.9■□□□□ 0.46
GNE-202ENST00000396594 ARAP3Q8WWN8 1544 aa17.9■□□□□ 0.46
GNE-202ENST00000396594 TMCO3Q6UWJ1 677 aa17.9■□□□□ 0.46
GNE-202ENST00000396594 CCDC85AQ96PX6 553 aaPredicted RBP17.9■□□□□ 0.46
GNE-202ENST00000396594 KCNG1Q9UIX4 513 aa17.9■□□□□ 0.46
GNE-202ENST00000396594 ABCA8O94911 1581 aa17.9■□□□□ 0.46
GNE-202ENST00000396594 SHROOM2Q13796 1616 aa17.9■□□□□ 0.46
GNE-202ENST00000396594 NT5C2P49902 561 aa17.9■□□□□ 0.46
GNE-202ENST00000396594 SLC4A4Q9Y6R1 1079 aa17.9■□□□□ 0.46
GNE-202ENST00000396594 TNPO1Q92973 898 aaKnown RBP17.9■□□□□ 0.46
GNE-202ENST00000396594 NIP7Q9Y221 180 aaKnown RBP eCLIP17.9■□□□□ 0.46
GNE-202ENST00000396594 GOLGA6L10A0A0M3HER8 536 aa17.89■□□□□ 0.45
GNE-202ENST00000396594 MTHFSDQ2M296 383 aaKnown RBP17.89■□□□□ 0.45
GNE-202ENST00000396594 LZTS2Q9BRK4 669 aa17.89■□□□□ 0.45
GNE-202ENST00000396594 INCENPQ9NQS7 918 aa17.89■□□□□ 0.45
GNE-202ENST00000396594 CGNQ9P2M7 1197 aaKnown RBP17.89■□□□□ 0.45
GNE-202ENST00000396594 FBXO3Q9UK99 471 aa17.89■□□□□ 0.45
GNE-202ENST00000396594 NLRP1Q9C000 1473 aa17.89■□□□□ 0.45
GNE-202ENST00000396594 TTLL12Q14166 644 aaPredicted RBP17.89■□□□□ 0.45
GNE-202ENST00000396594 RRP36Q96EU6 259 aaKnown RBP17.89■□□□□ 0.45
GNE-202ENST00000396594 TMEM87BQ96K49 555 aa17.89■□□□□ 0.45
GNE-202ENST00000396594 PKNOX2Q96KN3 472 aa17.89■□□□□ 0.45
GNE-202ENST00000396594 CLIP2Q9UDT6 1046 aa17.89■□□□□ 0.45
GNE-202ENST00000396594 MLH3Q9UHC1 1453 aa17.88■□□□□ 0.45
GNE-202ENST00000396594 GIGYF2Q6Y7W6 1299 aaKnown RBP17.88■□□□□ 0.45
GNE-202ENST00000396594 SMC5Q8IY18 1101 aa17.88■□□□□ 0.45
GNE-202ENST00000396594 MSANTD4Q8NCY6 345 aa17.88■□□□□ 0.45
GNE-202ENST00000396594 LLPHQ9BRT6 129 aaKnown RBP17.88■□□□□ 0.45
GNE-202ENST00000396594 VAMP4O75379 141 aa17.88■□□□□ 0.45
GNE-202ENST00000396594 TBC1D2Q9BYX2 928 aa17.88■□□□□ 0.45
GNE-202ENST00000396594 CYLC1P35663 651 aaPredicted RBP17.88■□□□□ 0.45
GNE-202ENST00000396594 LMBR1LQ6UX01 489 aa17.88■□□□□ 0.45
GNE-202ENST00000396594 BBXQ8WY36 941 aaPredicted RBP17.88■□□□□ 0.45
GNE-202ENST00000396594 ERVV-2B6SEH9 535 aa17.88■□□□□ 0.45
GNE-202ENST00000396594 LMBR1Q8WVP7 490 aa17.88■□□□□ 0.45
GNE-202ENST00000396594 MRPS27Q92552 414 aaKnown RBP17.88■□□□□ 0.45
GNE-202ENST00000396594 ZC3H12CQ9C0D7 883 aaKnown RBP17.88■□□□□ 0.45
GNE-202ENST00000396594 TSPYL1Q9H0U9 437 aa17.88■□□□□ 0.45
GNE-202ENST00000396594 PAXBP1Q9Y5B6 917 aa17.88■□□□□ 0.45
GNE-202ENST00000396594 KLF18A0A0U1RQI7 1052 aa17.87■□□□□ 0.45
GNE-202ENST00000396594 KRT13P13646 458 aa17.87■□□□□ 0.45
GNE-202ENST00000396594 MICALCLQ6ZW33 695 aa17.87■□□□□ 0.45
GNE-202ENST00000396594 SYCE3A1L190 88 aa17.87■□□□□ 0.45
GNE-202ENST00000396594 ZNF622Q969S3 477 aaKnown RBP eCLIP17.87■□□□□ 0.45
GNE-202ENST00000396594 NUP88Q99567 741 aaPredicted RBP17.87■□□□□ 0.45
GNE-202ENST00000396594 SLC26A6Q9BXS9 759 aa17.87■□□□□ 0.45
GNE-202ENST00000396594 TARBP1Q13395 1621 aaKnown RBP17.87■□□□□ 0.45
GNE-202ENST00000396594 ATP7BP35670 1465 aa17.87■□□□□ 0.45
GNE-202ENST00000396594 LMTK3Q96Q04 1460 aa17.87■□□□□ 0.45
GNE-202ENST00000396594 PSMA7O14818 248 aa17.87■□□□□ 0.45
GNE-202ENST00000396594 SRRTQ9BXP5 876 aaKnown RBP17.87■□□□□ 0.45
GNE-202ENST00000396594 RBM8AQ9Y5S9 174 aaKnown RBP17.87■□□□□ 0.45
GNE-202ENST00000396594 STK11IPQ8N1F8 1099 aa17.86■□□□□ 0.45
GNE-202ENST00000396594 SDSP20132 328 aa17.86■□□□□ 0.45
GNE-202ENST00000396594 SYKP43405 635 aa17.86■□□□□ 0.45
GNE-202ENST00000396594 NCBP1Q09161 790 aaKnown RBP17.86■□□□□ 0.45
GNE-202ENST00000396594 RBM26Q5T8P6 1007 aaKnown RBP17.86■□□□□ 0.45
GNE-202ENST00000396594 METTL22Q9BUU2 404 aaPredicted RBP17.86■□□□□ 0.45
GNE-202ENST00000396594 PLEKHG1Q9ULL1 1385 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms