RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 MSNP26038 577 aaKnown RBP4.46□□□□□ -1.7
XRCC4-203ENST00000396027 GABPB1Q06547 395 aaPredicted RBP4.46□□□□□ -1.7
XRCC4-203ENST00000396027 HDAC1Q13547 482 aaPredicted RBP4.46□□□□□ -1.7
XRCC4-203ENST00000396027 OTUD6BQ8N6M0 293 aa4.46□□□□□ -1.7
XRCC4-203ENST00000396027 EPS8L1Q8TE68 723 aa4.46□□□□□ -1.7
XRCC4-203ENST00000396027 TIGD1Q96MW7 591 aa4.46□□□□□ -1.7
XRCC4-203ENST00000396027 CSRNP1Q96S65 589 aa4.46□□□□□ -1.7
XRCC4-203ENST00000396027 MYCBPQ99417 103 aaPredicted RBP4.46□□□□□ -1.7
XRCC4-203ENST00000396027 DBNDD2Q9BQY9 259 aa4.46□□□□□ -1.7
XRCC4-203ENST00000396027 MRPL18Q9H0U6 180 aaKnown RBP4.46□□□□□ -1.7
XRCC4-203ENST00000396027 SLC6A14Q9UN76 642 aa4.46□□□□□ -1.7
XRCC4-203ENST00000396027 NCAPD3P42695 1498 aa4.45□□□□□ -1.7
XRCC4-203ENST00000396027 SCAPERQ9BY12 1400 aa4.45□□□□□ -1.7
XRCC4-203ENST00000396027 DHX15O43143 795 aaKnown RBP4.45□□□□□ -1.7
XRCC4-203ENST00000396027 RGS9O75916 674 aaPredicted RBP4.45□□□□□ -1.7
XRCC4-203ENST00000396027 FARP2O94887 1054 aaPredicted RBP4.45□□□□□ -1.7
XRCC4-203ENST00000396027 ZSCAN20P17040 1043 aaPredicted RBP4.45□□□□□ -1.7
XRCC4-203ENST00000396027 MAP2K1Q02750 393 aaPredicted RBP4.45□□□□□ -1.7
XRCC4-203ENST00000396027 LMOD3Q0VAK6 560 aa4.45□□□□□ -1.7
XRCC4-203ENST00000396027 SKOR2Q2VWA4 1001 aaPredicted RBP4.45□□□□□ -1.7
XRCC4-203ENST00000396027 NBPF6Q5VWK0 638 aa4.45□□□□□ -1.7
XRCC4-203ENST00000396027 Q6ZS46 218 aa4.45□□□□□ -1.7
XRCC4-203ENST00000396027 NBPF5PQ86XG9 351 aaPredicted RBP4.45□□□□□ -1.7
XRCC4-203ENST00000396027 EGFL6Q8IUX8 553 aa4.45□□□□□ -1.7
XRCC4-203ENST00000396027 BANK1Q8NDB2 785 aa4.45□□□□□ -1.7
XRCC4-203ENST00000396027 MKL1Q969V6 931 aa4.45□□□□□ -1.7
XRCC4-203ENST00000396027 PRIMPOLQ96LW4 560 aa4.45□□□□□ -1.7
XRCC4-203ENST00000396027 NBPF4Q96M43 638 aa4.45□□□□□ -1.7
XRCC4-203ENST00000396027 FBXL18Q96ME1 805 aa4.45□□□□□ -1.7
XRCC4-203ENST00000396027 HIRIP3Q9BW71 556 aaPredicted RBP4.45□□□□□ -1.7
XRCC4-203ENST00000396027 ETNK1Q9HBU6 452 aa4.45□□□□□ -1.7
XRCC4-203ENST00000396027 RAPGEFL1Q9UHV5 662 aa4.45□□□□□ -1.7
XRCC4-203ENST00000396027 GOLIM4O00461 696 aa4.44□□□□□ -1.7
XRCC4-203ENST00000396027 HSPA5P11021 654 aaKnown RBP4.44□□□□□ -1.7
XRCC4-203ENST00000396027 ITGAEP38570 1179 aa4.44□□□□□ -1.7
XRCC4-203ENST00000396027 CCDC173Q0VFZ6 552 aa4.44□□□□□ -1.7
XRCC4-203ENST00000396027 OS9Q13438 667 aaPredicted RBP4.44□□□□□ -1.7
XRCC4-203ENST00000396027 PSAPL1Q6NUJ1 521 aa4.44□□□□□ -1.7
XRCC4-203ENST00000396027 KIAA1211Q6ZU35 1233 aa4.44□□□□□ -1.7
XRCC4-203ENST00000396027 UBE2OQ9C0C9 1292 aaKnown RBP4.44□□□□□ -1.7
XRCC4-203ENST00000396027 CEP83Q9Y592 693 aa4.44□□□□□ -1.7
XRCC4-203ENST00000396027 GPC6Q9Y625 555 aaPredicted RBP4.44□□□□□ -1.7
XRCC4-203ENST00000396027 IBTKQ9P2D0 1353 aaPredicted RBP4.43□□□□□ -1.7
XRCC4-203ENST00000396027 FSD2A1L4K1 749 aa4.43□□□□□ -1.7
XRCC4-203ENST00000396027 F8W735 103 aaPredicted RBP4.43□□□□□ -1.7
XRCC4-203ENST00000396027 APBB1O00213 710 aa4.43□□□□□ -1.7
XRCC4-203ENST00000396027 TNNT3P45378 269 aaPredicted RBP4.43□□□□□ -1.7
XRCC4-203ENST00000396027 RBM25P49756 843 aaKnown RBP4.43□□□□□ -1.7
XRCC4-203ENST00000396027 SFSWAPQ12872 951 aaKnown RBP4.43□□□□□ -1.7
XRCC4-203ENST00000396027 RNF43Q68DV7 783 aa4.43□□□□□ -1.7
XRCC4-203ENST00000396027 ZSCAN30Q86W11 494 aa4.43□□□□□ -1.7
XRCC4-203ENST00000396027 DCAF11Q8TEB1 546 aa4.43□□□□□ -1.7
XRCC4-203ENST00000396027 GJD4Q96KN9 370 aaPredicted RBP4.43□□□□□ -1.7
XRCC4-203ENST00000396027 ZNF830Q96NB3 372 aaPredicted RBP4.43□□□□□ -1.7
XRCC4-203ENST00000396027 RRAGDQ9NQL2 400 aaPredicted RBP4.43□□□□□ -1.7
XRCC4-203ENST00000396027 ZNF330Q9Y3S2 320 aaPredicted RBP4.43□□□□□ -1.7
XRCC4-203ENST00000396027 NUB1Q9Y5A7 615 aa4.43□□□□□ -1.7
XRCC4-203ENST00000396027 MRVI1Q9Y6F6 885 aa4.43□□□□□ -1.7
XRCC4-203ENST00000396027 PLEKHD1A6NEE1 506 aa4.42□□□□□ -1.7
XRCC4-203ENST00000396027 DLL1O00548 723 aa4.42□□□□□ -1.7
XRCC4-203ENST00000396027 CCDC172P0C7W6 258 aa4.42□□□□□ -1.7
XRCC4-203ENST00000396027 WFDC8Q8IUA0 241 aa4.42□□□□□ -1.7
XRCC4-203ENST00000396027 KSR1Q8IVT5 923 aa4.42□□□□□ -1.7
XRCC4-203ENST00000396027 SNRNP27Q8WVK2 155 aaKnown RBP4.42□□□□□ -1.7
XRCC4-203ENST00000396027 NCAPGQ9BPX3 1015 aa4.42□□□□□ -1.7
XRCC4-203ENST00000396027 BACH2Q9BYV9 841 aa4.42□□□□□ -1.7
XRCC4-203ENST00000396027 UPF2Q9HAU5 1272 aaKnown RBP4.42□□□□□ -1.7
XRCC4-203ENST00000396027 NEUROD4Q9HD90 331 aa4.42□□□□□ -1.7
XRCC4-203ENST00000396027 SMC4Q9NTJ3 1288 aa4.42□□□□□ -1.7
XRCC4-203ENST00000396027 RNF123Q5XPI4 1314 aa4.42□□□□□ -1.7
XRCC4-203ENST00000396027 ZNF500O60304 480 aaPredicted RBP4.41□□□□□ -1.7
XRCC4-203ENST00000396027 SETSIPP0DME0 302 aa4.41□□□□□ -1.7
XRCC4-203ENST00000396027 SARNPP82979 210 aaKnown RBP4.41□□□□□ -1.7
XRCC4-203ENST00000396027 HSP90B2PQ58FF3 399 aa4.41□□□□□ -1.7
XRCC4-203ENST00000396027 TSHZ1Q6ZSZ6 1077 aa4.41□□□□□ -1.7
XRCC4-203ENST00000396027 SLC26A8Q96RN1 970 aa4.41□□□□□ -1.7
XRCC4-203ENST00000396027 MED4Q9NPJ6 270 aa4.41□□□□□ -1.7
XRCC4-203ENST00000396027 GPR37L1O60883 481 aa4.41□□□□□ -1.7
XRCC4-203ENST00000396027 EIF3JO75822 258 aaKnown RBP4.41□□□□□ -1.7
XRCC4-203ENST00000396027 FBXO45P0C2W1 286 aa4.41□□□□□ -1.7
XRCC4-203ENST00000396027 ZNF853P0CG23 659 aa4.41□□□□□ -1.7
XRCC4-203ENST00000396027 TBC1D8BQ0IIM8 1120 aa4.41□□□□□ -1.7
XRCC4-203ENST00000396027 NOM1Q5C9Z4 860 aaKnown RBP4.41□□□□□ -1.7
XRCC4-203ENST00000396027 SASS6Q6UVJ0 657 aa4.41□□□□□ -1.7
XRCC4-203ENST00000396027 RAB44Q7Z6P3 723 aaPredicted RBP4.41□□□□□ -1.7
XRCC4-203ENST00000396027 SLC38A3Q99624 504 aa4.41□□□□□ -1.7
XRCC4-203ENST00000396027 PRDM10Q9NQV6 1147 aa4.41□□□□□ -1.7
XRCC4-203ENST00000396027 TULP2O00295 520 aa4.4□□□□□ -1.71
XRCC4-203ENST00000396027 PSPNO60542 156 aa4.4□□□□□ -1.71
XRCC4-203ENST00000396027 IGSF3O75054 1194 aa4.4□□□□□ -1.71
XRCC4-203ENST00000396027 ALX3O95076 343 aa4.4□□□□□ -1.71
XRCC4-203ENST00000396027 GLB1P16278 677 aa4.4□□□□□ -1.71
XRCC4-203ENST00000396027 UBTFP17480 764 aaKnown RBP4.4□□□□□ -1.71
XRCC4-203ENST00000396027 ERCC3P19447 782 aa4.4□□□□□ -1.71
XRCC4-203ENST00000396027 GTF2F1P35269 517 aaKnown RBP eCLIP4.4□□□□□ -1.71
XRCC4-203ENST00000396027 SMTNP53814 917 aa4.4□□□□□ -1.71
XRCC4-203ENST00000396027 KCNQ4P56696 695 aa4.4□□□□□ -1.71
XRCC4-203ENST00000396027 KRTAP1-1Q07627 177 aa4.4□□□□□ -1.71
XRCC4-203ENST00000396027 NR1H3Q13133 447 aa4.4□□□□□ -1.71
XRCC4-203ENST00000396027 UVSSAQ2YD98 709 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms