RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 SMIM5Q71RC9 77 aa21.36■■□□□ 1.01
SREBF1-204ENST00000395756 NAP1L2Q9ULW6 460 aaPredicted RBP21.36■■□□□ 1.01
SREBF1-204ENST00000395756 WDR33Q9C0J8 1336 aaKnown RBP21.35■■□□□ 1.01
SREBF1-204ENST00000395756 SNAP23O00161 211 aa21.35■■□□□ 1.01
SREBF1-204ENST00000395756 STX6O43752 255 aa21.35■■□□□ 1.01
SREBF1-204ENST00000395756 ZSCAN23Q3MJ62 389 aa21.35■■□□□ 1.01
SREBF1-204ENST00000395756 CCDC158Q5M9N0 1113 aa21.35■■□□□ 1.01
SREBF1-204ENST00000395756 MED23Q9ULK4 1368 aa21.35■■□□□ 1.01
SREBF1-204ENST00000395756 BCL9O00512 1426 aa21.35■■□□□ 1.01
SREBF1-204ENST00000395756 CYP21A2P08686 494 aa21.35■■□□□ 1.01
SREBF1-204ENST00000395756 FERMT3Q86UX7 667 aa21.35■■□□□ 1.01
SREBF1-204ENST00000395756 MARCH10Q8NA82 808 aaPredicted RBP21.35■■□□□ 1.01
SREBF1-204ENST00000395756 TTLL11Q8NHH1 800 aa21.35■■□□□ 1.01
SREBF1-204ENST00000395756 CHST3Q7LGC8 479 aa21.34■■□□□ 1.01
SREBF1-204ENST00000395756 CNPY2Q9Y2B0 182 aa21.34■■□□□ 1.01
SREBF1-204ENST00000395756 ST3GAL1Q11201 340 aa21.34■■□□□ 1.01
SREBF1-204ENST00000395756 TM6SF1Q9BZW5 370 aa21.34■■□□□ 1.01
SREBF1-204ENST00000395756 HSP90B1P14625 803 aaKnown RBP21.34■■□□□ 1.01
SREBF1-204ENST00000395756 USP48Q86UV5 1035 aa21.33■■□□□ 1.01
SREBF1-204ENST00000395756 TMEM63CQ9P1W3 806 aa21.33■■□□□ 1.01
SREBF1-204ENST00000395756 SYCE3A1L190 88 aa21.33■■□□□ 1
SREBF1-204ENST00000395756 FIBPO43427 364 aa21.33■■□□□ 1
SREBF1-204ENST00000395756 RPS6KB1P23443 525 aa21.33■■□□□ 1
SREBF1-204ENST00000395756 AEBP2Q6ZN18 517 aaPredicted RBP21.33■■□□□ 1
SREBF1-204ENST00000395756 NEK1Q96PY6 1258 aa21.33■■□□□ 1
SREBF1-204ENST00000395756 RRAGDQ9NQL2 400 aaPredicted RBP21.33■■□□□ 1
SREBF1-204ENST00000395756 RPAP1Q9BWH6 1393 aaPredicted RBP21.32■■□□□ 1
SREBF1-204ENST00000395756 ZAP70P43403 619 aa21.32■■□□□ 1
SREBF1-204ENST00000395756 TRIM28Q13263 835 aaKnown RBP21.32■■□□□ 1
SREBF1-204ENST00000395756 FAM98CQ17RN3 349 aaKnown RBP21.32■■□□□ 1
SREBF1-204ENST00000395756 TTLL5Q6EMB2 1281 aa21.32■■□□□ 1
SREBF1-204ENST00000395756 KCNB2Q92953 911 aa21.32■■□□□ 1
SREBF1-204ENST00000395756 ZSCAN22P10073 491 aaPredicted RBP21.31■■□□□ 1
SREBF1-204ENST00000395756 FAM173BQ6P4H8 233 aa21.31■■□□□ 1
SREBF1-204ENST00000395756 SPATA31A1Q5TZJ5 1347 aa21.31■■□□□ 1
SREBF1-204ENST00000395756 ANKRD18BA2A2Z9 1011 aa21.31■■□□□ 1
SREBF1-204ENST00000395756 CIAO1O76071 339 aa21.31■■□□□ 1
SREBF1-204ENST00000395756 FOSBP53539 338 aa21.31■■□□□ 1
SREBF1-204ENST00000395756 HAND2P61296 217 aa21.31■■□□□ 1
SREBF1-204ENST00000395756 UBN2Q6ZU65 1347 aa21.31■■□□□ 1
SREBF1-204ENST00000395756 ABCA3Q99758 1704 aa21.31■■□□□ 1
SREBF1-204ENST00000395756 CTSWP56202 376 aa21.31■■□□□ 1
SREBF1-204ENST00000395756 TOB2Q14106 344 aaPredicted RBP21.31■■□□□ 1
SREBF1-204ENST00000395756 FAM182BQ5T319 152 aa21.31■■□□□ 1
SREBF1-204ENST00000395756 C8orf37Q96NL8 207 aa21.31■■□□□ 1
SREBF1-204ENST00000395756 BCL11BQ9C0K0 894 aaPredicted RBP21.31■■□□□ 1
SREBF1-204ENST00000395756 TOGARAM1Q9Y4F4 1720 aa21.3■■□□□ 1
SREBF1-204ENST00000395756 CSF1RP07333 972 aa21.3■■□□□ 1
SREBF1-204ENST00000395756 CRKLP46109 303 aaKnown RBP21.3■■□□□ 1
SREBF1-204ENST00000395756 ATP2B3Q16720 1220 aa21.3■■□□□ 1
SREBF1-204ENST00000395756 LARP1BQ659C4 914 aaKnown RBP21.3■■□□□ 1
SREBF1-204ENST00000395756 Q6ZUG5 572 aa21.3■■□□□ 1
SREBF1-204ENST00000395756 ZSCAN31Q96LW9 406 aaPredicted RBP21.3■■□□□ 1
SREBF1-204ENST00000395756 OSBP2Q969R2 916 aa21.3■■□□□ 1
SREBF1-204ENST00000395756 AKAP2Q9Y2D5 859 aa21.3■■□□□ 1
SREBF1-204ENST00000395756 LOC102724428A0A0B4J2F2 783 aa21.29■■□□□ 1
SREBF1-204ENST00000395756 M0R2C6 588 aa21.29■■□□□ 1
SREBF1-204ENST00000395756 SIK1P57059 783 aa21.29■■□□□ 1
SREBF1-204ENST00000395756 DDX11Q96FC9 970 aa21.29■■□□□ 1
SREBF1-204ENST00000395756 GPR108Q9NPR9 543 aa21.29■■□□□ 1
SREBF1-204ENST00000395756 RRP9O43818 475 aaKnown RBP21.29■■□□□ 1
SREBF1-204ENST00000395756 ITPK1Q13572 414 aa21.29■■□□□ 1
SREBF1-204ENST00000395756 SUSD4Q5VX71 490 aa21.29■■□□□ 1
SREBF1-204ENST00000395756 STOX1Q6ZVD7 989 aa21.29■■□□□ 1
SREBF1-204ENST00000395756 BRF1Q92994 677 aa21.29■■□□□ 1
SREBF1-204ENST00000395756 SH2B1Q9NRF2 756 aaPredicted RBP21.29■■□□□ 1
SREBF1-204ENST00000395756 U3KPZ7 1027 aaPredicted RBP21.29■■□□□ 1
SREBF1-204ENST00000395756 ROBO1Q9Y6N7 1651 aa21.29■■□□□ 1
SREBF1-204ENST00000395756 RNF113AO15541 343 aaKnown RBP21.29■■□□□ 1
SREBF1-204ENST00000395756 TAOK2Q9UL54 1235 aa21.29■■□□□ 1
SREBF1-204ENST00000395756 DISP2A7MBM2 1401 aa21.28■■□□□ 1
SREBF1-204ENST00000395756 NHSL1Q5SYE7 1610 aa21.28■■□□□ 1
SREBF1-204ENST00000395756 DNM1Q05193 864 aaKnown RBP21.28■■□□□ 1
SREBF1-204ENST00000395756 SHANK3Q9BYB0 1731 aa21.28■■□□□ 1
SREBF1-204ENST00000395756 MAST3O60307 1309 aa21.28■■□□□ 1
SREBF1-204ENST00000395756 HSPD1P10809 573 aaKnown RBP21.28■■□□□ 1
SREBF1-204ENST00000395756 IL6STP40189 918 aaPredicted RBP21.28■■□□□ 1
SREBF1-204ENST00000395756 RNF214Q8ND24 703 aa21.28■■□□□ 1
SREBF1-204ENST00000395756 SEC31BQ9NQW1 1179 aa21.28■■□□□ 1
SREBF1-204ENST00000395756 HMG20BQ9P0W2 317 aa21.28■■□□□ 1
SREBF1-204ENST00000395756 F13A1P00488 732 aa21.27■■□□□ 1
SREBF1-204ENST00000395756 INTS5Q6P9B9 1019 aaKnown RBP21.27■■□□□ 1
SREBF1-204ENST00000395756 BICDL1Q6ZP65 573 aa21.27■■□□□ 1
SREBF1-204ENST00000395756 NGLY1Q96IV0 654 aa21.27■■□□□ 1
SREBF1-204ENST00000395756 RIPOR2Q9Y4F9 1068 aa21.27■■□□□ 1
SREBF1-204ENST00000395756 JAK2O60674 1132 aa21.27■■□□□ 1
SREBF1-204ENST00000395756 LAMB4A4D0S4 1761 aa21.27■□□□□ 0.99
SREBF1-204ENST00000395756 NASPP49321 788 aaPredicted RBP21.26■□□□□ 0.99
SREBF1-204ENST00000395756 ZMYM1Q5SVZ6 1142 aa21.26■□□□□ 0.99
SREBF1-204ENST00000395756 CCDC87Q9NVE4 849 aa21.26■□□□□ 0.99
SREBF1-204ENST00000395756 USPL1Q5W0Q7 1092 aa21.26■□□□□ 0.99
SREBF1-204ENST00000395756 PTF1AQ7RTS3 328 aa21.26■□□□□ 0.99
SREBF1-204ENST00000395756 MTMR6Q9Y217 621 aa21.26■□□□□ 0.99
SREBF1-204ENST00000395756 IDH1O75874 414 aaKnown RBP21.26■□□□□ 0.99
SREBF1-204ENST00000395756 PDE8AO60658 829 aa21.25■□□□□ 0.99
SREBF1-204ENST00000395756 CCT2P78371 535 aaKnown RBP21.25■□□□□ 0.99
SREBF1-204ENST00000395756 PUS7LQ9H0K6 701 aaKnown RBP21.25■□□□□ 0.99
SREBF1-204ENST00000395756 NIP7Q9Y221 180 aaKnown RBP eCLIP21.25■□□□□ 0.99
SREBF1-204ENST00000395756 UBR2Q8IWV8 1755 aa21.25■□□□□ 0.99
SREBF1-204ENST00000395756 HELLSQ9NRZ9 838 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms