RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 SSH2Q76I76 1423 aa19.62■□□□□ 0.73
SIPA1-201ENST00000394224 DDX58O95786 925 aaKnown RBP19.62■□□□□ 0.73
SIPA1-201ENST00000394224 STK38Q15208 465 aa19.62■□□□□ 0.73
SIPA1-201ENST00000394224 PDILTQ8N807 584 aa19.62■□□□□ 0.73
SIPA1-201ENST00000394224 TNRQ92752 1358 aa19.62■□□□□ 0.73
SIPA1-201ENST00000394224 STOX1Q6ZVD7 989 aa19.62■□□□□ 0.73
SIPA1-201ENST00000394224 ERC1Q8IUD2 1116 aa19.62■□□□□ 0.73
SIPA1-201ENST00000394224 RNMTO43148 476 aaKnown RBP19.61■□□□□ 0.73
SIPA1-201ENST00000394224 LRRC8AQ8IWT6 810 aa19.61■□□□□ 0.73
SIPA1-201ENST00000394224 AIFM3Q96NN9 605 aa19.61■□□□□ 0.73
SIPA1-201ENST00000394224 AXIN2Q9Y2T1 843 aa19.61■□□□□ 0.73
SIPA1-201ENST00000394224 PI16Q6UXB8 463 aa19.61■□□□□ 0.73
SIPA1-201ENST00000394224 ANKRD24Q8TF21 1146 aa19.6■□□□□ 0.73
SIPA1-201ENST00000394224 OVOS2A0A0J9YW53 1432 aa19.6■□□□□ 0.73
SIPA1-201ENST00000394224 OVOS2Q6IE36 1432 aa19.6■□□□□ 0.73
SIPA1-201ENST00000394224 DPCR1Q3MIW9 517 aa19.6■□□□□ 0.73
SIPA1-201ENST00000394224 TOMM22Q9NS69 142 aa19.6■□□□□ 0.73
SIPA1-201ENST00000394224 CPLX1O14810 134 aa19.59■□□□□ 0.73
SIPA1-201ENST00000394224 ANKRD1Q15327 319 aa19.59■□□□□ 0.73
SIPA1-201ENST00000394224 LINS1Q8NG48 757 aa19.59■□□□□ 0.73
SIPA1-201ENST00000394224 TMEM2Q9UHN6 1383 aa19.59■□□□□ 0.73
SIPA1-201ENST00000394224 PREX1Q8TCU6 1659 aa19.58■□□□□ 0.73
SIPA1-201ENST00000394224 ZNF496Q96IT1 587 aaPredicted RBP19.58■□□□□ 0.73
SIPA1-201ENST00000394224 DENND2AQ9ULE3 1009 aa19.58■□□□□ 0.73
SIPA1-201ENST00000394224 CFAP45Q9UL16 551 aa19.58■□□□□ 0.73
SIPA1-201ENST00000394224 AOX1Q06278 1338 aa19.58■□□□□ 0.72
SIPA1-201ENST00000394224 CLIC4Q9Y696 253 aa19.58■□□□□ 0.72
SIPA1-201ENST00000394224 ATP1A3P13637 1013 aa19.57■□□□□ 0.72
SIPA1-201ENST00000394224 NDUFA8P51970 172 aa19.57■□□□□ 0.72
SIPA1-201ENST00000394224 KMT5BQ4FZB7 885 aa19.57■□□□□ 0.72
SIPA1-201ENST00000394224 TTC5Q8N0Z6 440 aa19.57■□□□□ 0.72
SIPA1-201ENST00000394224 MYL10Q9BUA6 226 aa19.57■□□□□ 0.72
SIPA1-201ENST00000394224 DNAI1Q9UI46 699 aa19.57■□□□□ 0.72
SIPA1-201ENST00000394224 TNNI3KQ59H18 835 aa19.57■□□□□ 0.72
SIPA1-201ENST00000394224 ANKRD13DQ6ZTN6 518 aa19.57■□□□□ 0.72
SIPA1-201ENST00000394224 FPGT-TNNI3KV9GXZ4 949 aa19.57■□□□□ 0.72
SIPA1-201ENST00000394224 CDC42BPGQ6DT37 1551 aa19.56■□□□□ 0.72
SIPA1-201ENST00000394224 SMTNL1A8MU46 457 aa19.56■□□□□ 0.72
SIPA1-201ENST00000394224 RESTQ13127 1097 aa19.56■□□□□ 0.72
SIPA1-201ENST00000394224 FBXO38Q6PIJ6 1188 aa19.56■□□□□ 0.72
SIPA1-201ENST00000394224 XPO4Q9C0E2 1151 aaKnown RBP19.56■□□□□ 0.72
SIPA1-201ENST00000394224 TTC21AQ8NDW8 1320 aa19.56■□□□□ 0.72
SIPA1-201ENST00000394224 URI1O94763 535 aaPredicted RBP19.56■□□□□ 0.72
SIPA1-201ENST00000394224 RAPGEF4Q8WZA2 1011 aa19.56■□□□□ 0.72
SIPA1-201ENST00000394224 UBE2Q2LH0YL09 131 aa19.55■□□□□ 0.72
SIPA1-201ENST00000394224 TPM3P06753 285 aa19.55■□□□□ 0.72
SIPA1-201ENST00000394224 LRRC24Q50LG9 513 aa19.55■□□□□ 0.72
SIPA1-201ENST00000394224 CEP57L1Q8IYX8 460 aa19.55■□□□□ 0.72
SIPA1-201ENST00000394224 TM6SF1Q9BZW5 370 aa19.55■□□□□ 0.72
SIPA1-201ENST00000394224 INCENPQ9NQS7 918 aa19.55■□□□□ 0.72
SIPA1-201ENST00000394224 COL15A1P39059 1388 aa19.55■□□□□ 0.72
SIPA1-201ENST00000394224 STX1AQ16623 288 aa19.55■□□□□ 0.72
SIPA1-201ENST00000394224 HTATSF1O43719 755 aaKnown RBP19.55■□□□□ 0.72
SIPA1-201ENST00000394224 SERPINC1P01008 464 aa19.55■□□□□ 0.72
SIPA1-201ENST00000394224 GCP02774 474 aa19.55■□□□□ 0.72
SIPA1-201ENST00000394224 GCKRQ14397 625 aa19.55■□□□□ 0.72
SIPA1-201ENST00000394224 PLA2G4DQ86XP0 818 aa19.55■□□□□ 0.72
SIPA1-201ENST00000394224 PUS3Q9BZE2 481 aaKnown RBP19.55■□□□□ 0.72
SIPA1-201ENST00000394224 NEURL1BA8MQ27 555 aa19.54■□□□□ 0.72
SIPA1-201ENST00000394224 COBLO75128 1261 aa19.54■□□□□ 0.72
SIPA1-201ENST00000394224 MCMDC2Q4G0Z9 681 aa19.54■□□□□ 0.72
SIPA1-201ENST00000394224 AKAP4Q5JQC9 854 aa19.54■□□□□ 0.72
SIPA1-201ENST00000394224 PCDHA7Q9UN72 937 aa19.54■□□□□ 0.72
SIPA1-201ENST00000394224 SNW1Q13573 536 aaKnown RBP19.54■□□□□ 0.72
SIPA1-201ENST00000394224 CFAP100Q494V2 611 aa19.54■□□□□ 0.72
SIPA1-201ENST00000394224 IP6K1Q92551 441 aa19.54■□□□□ 0.72
SIPA1-201ENST00000394224 HIP1O00291 1037 aa19.53■□□□□ 0.72
SIPA1-201ENST00000394224 SYNE3Q6ZMZ3 975 aa19.53■□□□□ 0.72
SIPA1-201ENST00000394224 CTNNA3Q9UI47 895 aa19.53■□□□□ 0.72
SIPA1-201ENST00000394224 GTF2F1P35269 517 aaKnown RBP eCLIP19.53■□□□□ 0.72
SIPA1-201ENST00000394224 CCDC34Q96HJ3 373 aa19.53■□□□□ 0.72
SIPA1-201ENST00000394224 GOLGA8BA8MQT2 603 aa19.53■□□□□ 0.72
SIPA1-201ENST00000394224 CMTR1Q8N1G2 835 aaKnown RBP19.53■□□□□ 0.72
SIPA1-201ENST00000394224 NSUN7Q8NE18 718 aaKnown RBP19.53■□□□□ 0.72
SIPA1-201ENST00000394224 KIF18AQ8NI77 898 aa19.53■□□□□ 0.72
SIPA1-201ENST00000394224 CPLX3Q8WVH0 158 aa19.53■□□□□ 0.72
SIPA1-201ENST00000394224 PHKBQ93100 1093 aa19.53■□□□□ 0.72
SIPA1-201ENST00000394224 ANKRD26Q9UPS8 1709 aa19.53■□□□□ 0.72
SIPA1-201ENST00000394224 NEO1Q92859 1461 aa19.53■□□□□ 0.72
SIPA1-201ENST00000394224 CTDNEP1O95476 244 aa19.52■□□□□ 0.72
SIPA1-201ENST00000394224 SEC31AO94979 1220 aaKnown RBP19.52■□□□□ 0.72
SIPA1-201ENST00000394224 GYS2P54840 703 aa19.52■□□□□ 0.72
SIPA1-201ENST00000394224 TAF7LQ5H9L4 462 aa19.52■□□□□ 0.72
SIPA1-201ENST00000394224 PTPRUQ92729 1446 aa19.52■□□□□ 0.72
SIPA1-201ENST00000394224 KLF18A0A0U1RQI7 1052 aa19.52■□□□□ 0.71
SIPA1-201ENST00000394224 RRP12Q5JTH9 1297 aaKnown RBP19.52■□□□□ 0.71
SIPA1-201ENST00000394224 TDRD7Q8NHU6 1098 aaKnown RBP19.52■□□□□ 0.71
SIPA1-201ENST00000394224 CLIC6Q96NY7 704 aa19.52■□□□□ 0.71
SIPA1-201ENST00000394224 KDRP35968 1356 aa19.52■□□□□ 0.71
SIPA1-201ENST00000394224 PEAK1Q9H792 1746 aa19.52■□□□□ 0.71
SIPA1-201ENST00000394224 IFIT1P09914 478 aaKnown RBP19.51■□□□□ 0.71
SIPA1-201ENST00000394224 SFPQP23246 707 aaKnown RBP eCLIP19.51■□□□□ 0.71
SIPA1-201ENST00000394224 MICU3Q86XE3 530 aa19.51■□□□□ 0.71
SIPA1-201ENST00000394224 C8orf76Q96K31 380 aa19.51■□□□□ 0.71
SIPA1-201ENST00000394224 UTP14AQ9BVJ6 771 aaKnown RBP19.51■□□□□ 0.71
SIPA1-201ENST00000394224 ZCCHC17Q9NP64 241 aaKnown RBP19.51■□□□□ 0.71
SIPA1-201ENST00000394224 IQCB1Q15051 598 aa19.51■□□□□ 0.71
SIPA1-201ENST00000394224 ZNF827Q17R98 1081 aa19.51■□□□□ 0.71
SIPA1-201ENST00000394224 ZNF790Q6PG37 636 aa19.51■□□□□ 0.71
SIPA1-201ENST00000394224 ORC3Q9UBD5 711 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms