RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 GOLGA6AQ9NYA3 693 aa18.36■□□□□ 0.53
SHANK1-204ENST00000391814 STAT6P42226 847 aa18.36■□□□□ 0.53
SHANK1-204ENST00000391814 ECHDC1Q9NTX5 307 aa18.36■□□□□ 0.53
SHANK1-204ENST00000391814 TCP11L1Q9NUJ3 509 aa18.36■□□□□ 0.53
SHANK1-204ENST00000391814 TLDC2A0PJX2 215 aa18.35■□□□□ 0.53
SHANK1-204ENST00000391814 NDUFAB1O14561 156 aa18.35■□□□□ 0.53
SHANK1-204ENST00000391814 VIMP08670 466 aaKnown RBP18.35■□□□□ 0.53
SHANK1-204ENST00000391814 ARID5AQ03989 594 aa18.35■□□□□ 0.53
SHANK1-204ENST00000391814 DMTNQ08495 405 aa18.35■□□□□ 0.53
SHANK1-204ENST00000391814 KIF5AQ12840 1032 aa18.35■□□□□ 0.53
SHANK1-204ENST00000391814 SF3B2Q13435 895 aaKnown RBP18.35■□□□□ 0.53
SHANK1-204ENST00000391814 SETDB1Q15047 1291 aa18.35■□□□□ 0.53
SHANK1-204ENST00000391814 FERMT2Q96AC1 680 aa18.35■□□□□ 0.53
SHANK1-204ENST00000391814 CEP85LQ5SZL2 805 aa18.35■□□□□ 0.53
SHANK1-204ENST00000391814 MKNK2Q9HBH9 465 aa18.35■□□□□ 0.53
SHANK1-204ENST00000391814 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.35■□□□□ 0.53
SHANK1-204ENST00000391814 RGS22Q8NE09 1264 aa18.35■□□□□ 0.53
SHANK1-204ENST00000391814 FEZ2Q9UHY8 353 aaPredicted RBP18.35■□□□□ 0.53
SHANK1-204ENST00000391814 CCDC50Q8IVM0 306 aa18.34■□□□□ 0.53
SHANK1-204ENST00000391814 TSNARE1Q96NA8 513 aa18.34■□□□□ 0.53
SHANK1-204ENST00000391814 MYCBPQ99417 103 aaPredicted RBP18.34■□□□□ 0.53
SHANK1-204ENST00000391814 STX17P56962 302 aa18.34■□□□□ 0.53
SHANK1-204ENST00000391814 ZFYP08048 801 aaPredicted RBP18.34■□□□□ 0.53
SHANK1-204ENST00000391814 AK2P54819 239 aa18.34■□□□□ 0.53
SHANK1-204ENST00000391814 BANK1Q8NDB2 785 aa18.34■□□□□ 0.53
SHANK1-204ENST00000391814 ALG1Q9BT22 464 aa18.34■□□□□ 0.53
SHANK1-204ENST00000391814 TBC1D5Q92609 795 aa18.34■□□□□ 0.53
SHANK1-204ENST00000391814 DHX58Q96C10 678 aa18.34■□□□□ 0.53
SHANK1-204ENST00000391814 VAV2P52735 878 aa18.34■□□□□ 0.53
SHANK1-204ENST00000391814 DDX12PQ92771 950 aa18.34■□□□□ 0.53
SHANK1-204ENST00000391814 STMN2Q93045 179 aa18.34■□□□□ 0.53
SHANK1-204ENST00000391814 CCDC63Q8NA47 563 aa18.34■□□□□ 0.53
SHANK1-204ENST00000391814 NCOA7Q8NI08 942 aa18.34■□□□□ 0.53
SHANK1-204ENST00000391814 ZNF692Q9BU19 519 aaPredicted RBP18.34■□□□□ 0.53
SHANK1-204ENST00000391814 TRIM7Q9C029 511 aa18.34■□□□□ 0.53
SHANK1-204ENST00000391814 HECW1Q76N89 1606 aa18.33■□□□□ 0.53
SHANK1-204ENST00000391814 KLF18A0A0U1RQI7 1052 aa18.33■□□□□ 0.53
SHANK1-204ENST00000391814 INTS8Q75QN2 995 aaKnown RBP18.33■□□□□ 0.53
SHANK1-204ENST00000391814 TRMT1LQ7Z2T5 733 aaKnown RBP18.33■□□□□ 0.53
SHANK1-204ENST00000391814 RBM8AQ9Y5S9 174 aaKnown RBP18.33■□□□□ 0.53
SHANK1-204ENST00000391814 PPP1R9BQ96SB3 815 aa18.33■□□□□ 0.52
SHANK1-204ENST00000391814 GSTA5Q7RTV2 222 aa18.33■□□□□ 0.52
SHANK1-204ENST00000391814 CCDC25Q86WR0 208 aa18.33■□□□□ 0.52
SHANK1-204ENST00000391814 PPFIBP2Q8ND30 876 aa18.33■□□□□ 0.52
SHANK1-204ENST00000391814 PPP1R12CQ9BZL4 782 aa18.33■□□□□ 0.52
SHANK1-204ENST00000391814 IGHMBP2P38935 993 aaKnown RBP18.33■□□□□ 0.52
SHANK1-204ENST00000391814 TNNQ9UQP3 1299 aa18.32■□□□□ 0.52
SHANK1-204ENST00000391814 ZSCAN26Q16670 478 aa18.32■□□□□ 0.52
SHANK1-204ENST00000391814 IQCA1Q86XH1 822 aa18.32■□□□□ 0.52
SHANK1-204ENST00000391814 TSGA10Q9BZW7 698 aa18.32■□□□□ 0.52
SHANK1-204ENST00000391814 STIM2Q9P246 746 aa18.32■□□□□ 0.52
SHANK1-204ENST00000391814 TNIP1Q15025 636 aa18.32■□□□□ 0.52
SHANK1-204ENST00000391814 ATAD2BQ9ULI0 1458 aa18.32■□□□□ 0.52
SHANK1-204ENST00000391814 CIB2O75838 187 aa18.32■□□□□ 0.52
SHANK1-204ENST00000391814 NAPGQ99747 312 aaPredicted RBP18.32■□□□□ 0.52
SHANK1-204ENST00000391814 SYNJ1O43426 1573 aa18.32■□□□□ 0.52
SHANK1-204ENST00000391814 ZNF75DP51815 510 aa18.31■□□□□ 0.52
SHANK1-204ENST00000391814 GRIPAP1Q4V328 841 aa18.31■□□□□ 0.52
SHANK1-204ENST00000391814 NEK11Q8NG66 645 aa18.31■□□□□ 0.52
SHANK1-204ENST00000391814 CCDC77Q9BR77 488 aa18.31■□□□□ 0.52
SHANK1-204ENST00000391814 MBIPQ9NS73 344 aa18.31■□□□□ 0.52
SHANK1-204ENST00000391814 CWC25Q9NXE8 425 aaPredicted RBP18.31■□□□□ 0.52
SHANK1-204ENST00000391814 NCAPD3P42695 1498 aa18.31■□□□□ 0.52
SHANK1-204ENST00000391814 AKR1B15C9JRZ8 316 aaPredicted RBP18.31■□□□□ 0.52
SHANK1-204ENST00000391814 UBA7P41226 1012 aa18.31■□□□□ 0.52
SHANK1-204ENST00000391814 LRCH2Q5VUJ6 765 aa18.31■□□□□ 0.52
SHANK1-204ENST00000391814 PDE1AP54750 535 aa18.31■□□□□ 0.52
SHANK1-204ENST00000391814 ARFGAP2Q8N6H7 521 aa18.31■□□□□ 0.52
SHANK1-204ENST00000391814 FAM114A2Q9NRY5 505 aa18.31■□□□□ 0.52
SHANK1-204ENST00000391814 PTPN23Q9H3S7 1636 aa18.31■□□□□ 0.52
SHANK1-204ENST00000391814 PPP1R42Q7Z4L9 355 aa18.31■□□□□ 0.52
SHANK1-204ENST00000391814 SPTLC2O15270 562 aa18.3■□□□□ 0.52
SHANK1-204ENST00000391814 CEP120Q8N960 986 aa18.3■□□□□ 0.52
SHANK1-204ENST00000391814 CETN1Q12798 172 aa18.3■□□□□ 0.52
SHANK1-204ENST00000391814 NAIPQ13075 1403 aa18.3■□□□□ 0.52
SHANK1-204ENST00000391814 SLC4A8Q2Y0W8 1093 aa18.3■□□□□ 0.52
SHANK1-204ENST00000391814 IFT74Q96LB3 600 aa18.3■□□□□ 0.52
SHANK1-204ENST00000391814 GJC1P36383 396 aa18.3■□□□□ 0.52
SHANK1-204ENST00000391814 MAP3K12Q12852 859 aa18.3■□□□□ 0.52
SHANK1-204ENST00000391814 SYCP3Q8IZU3 236 aa18.3■□□□□ 0.52
SHANK1-204ENST00000391814 SWAP70Q9UH65 585 aa18.3■□□□□ 0.52
SHANK1-204ENST00000391814 SF3A3Q12874 501 aaKnown RBP eCLIP18.29■□□□□ 0.52
SHANK1-204ENST00000391814 CCDC122Q5T0U0 273 aa18.29■□□□□ 0.52
SHANK1-204ENST00000391814 RBM28Q9NW13 759 aaKnown RBP18.29■□□□□ 0.52
SHANK1-204ENST00000391814 ANAPC4Q9UJX5 808 aa18.29■□□□□ 0.52
SHANK1-204ENST00000391814 MAP3K2Q9Y2U5 619 aa18.29■□□□□ 0.52
SHANK1-204ENST00000391814 ATAD2Q6PL18 1390 aa18.29■□□□□ 0.52
SHANK1-204ENST00000391814 FRMD3A2A2Y4 597 aa18.29■□□□□ 0.52
SHANK1-204ENST00000391814 CCDC42Q96M95 316 aa18.29■□□□□ 0.52
SHANK1-204ENST00000391814 PSMC4P43686 418 aa18.29■□□□□ 0.52
SHANK1-204ENST00000391814 FLIIQ13045 1269 aa18.29■□□□□ 0.52
SHANK1-204ENST00000391814 CACNA2D3Q8IZS8 1091 aa18.29■□□□□ 0.52
SHANK1-204ENST00000391814 RNF41Q9H4P4 317 aaPredicted RBP18.29■□□□□ 0.52
SHANK1-204ENST00000391814 HGSO14964 777 aaPredicted RBP18.29■□□□□ 0.52
SHANK1-204ENST00000391814 BICDL1Q6ZP65 573 aa18.29■□□□□ 0.52
SHANK1-204ENST00000391814 SREK1Q8WXA9 508 aaKnown RBP18.29■□□□□ 0.52
SHANK1-204ENST00000391814 CBX8Q9HC52 389 aa18.29■□□□□ 0.52
SHANK1-204ENST00000391814 GCKP35557 465 aa18.28■□□□□ 0.52
SHANK1-204ENST00000391814 DISP3Q9P2K9 1392 aa18.28■□□□□ 0.52
SHANK1-204ENST00000391814 WDHD1O75717 1129 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms