RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 FAM13BQ9NYF5 915 aa6.94□□□□□ -1.3
TRAV40-201ENST00000390467 DEAF1O75398 565 aaPredicted RBP6.93□□□□□ -1.3
TRAV40-201ENST00000390467 CYP2E1P05181 493 aaPredicted RBP6.93□□□□□ -1.3
TRAV40-201ENST00000390467 ADGRE1Q14246 886 aa6.93□□□□□ -1.3
TRAV40-201ENST00000390467 WFDC8Q8IUA0 241 aa6.93□□□□□ -1.3
TRAV40-201ENST00000390467 NUDT16Q96DE0 195 aaKnown RBP6.93□□□□□ -1.3
TRAV40-201ENST00000390467 NACC1Q96RE7 527 aa6.93□□□□□ -1.3
TRAV40-201ENST00000390467 TRIM33Q9UPN9 1127 aa6.93□□□□□ -1.3
TRAV40-201ENST00000390467 GHRHP01286 108 aa6.92□□□□□ -1.3
TRAV40-201ENST00000390467 ATP11AP98196 1134 aa6.92□□□□□ -1.3
TRAV40-201ENST00000390467 RSPO4Q2I0M5 234 aaPredicted RBP6.92□□□□□ -1.3
TRAV40-201ENST00000390467 GDF6Q6KF10 455 aaPredicted RBP6.92□□□□□ -1.3
TRAV40-201ENST00000390467 EDEM1Q92611 657 aa6.92□□□□□ -1.3
TRAV40-201ENST00000390467 TMEM63CQ9P1W3 806 aa6.92□□□□□ -1.3
TRAV40-201ENST00000390467 A6NHS1 94 aa6.91□□□□□ -1.3
TRAV40-201ENST00000390467 EIF1AXP47813 144 aaKnown RBP6.91□□□□□ -1.3
TRAV40-201ENST00000390467 ADAMTSL4Q6UY14 1074 aa6.91□□□□□ -1.3
TRAV40-201ENST00000390467 DTWD1Q8N5C7 304 aa6.91□□□□□ -1.3
TRAV40-201ENST00000390467 LENG1Q96BZ8 264 aaPredicted RBP6.91□□□□□ -1.3
TRAV40-201ENST00000390467 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.91□□□□□ -1.3
TRAV40-201ENST00000390467 C9orf172C9J069 976 aa6.9□□□□□ -1.3
TRAV40-201ENST00000390467 PDGFAP04085 211 aa6.9□□□□□ -1.3
TRAV40-201ENST00000390467 DNM1Q05193 864 aaKnown RBP6.9□□□□□ -1.3
TRAV40-201ENST00000390467 NKAPLQ5M9Q1 402 aa6.9□□□□□ -1.3
TRAV40-201ENST00000390467 FBXO11Q86XK2 927 aa6.9□□□□□ -1.3
TRAV40-201ENST00000390467 GGNBP2Q9H3C7 697 aa6.9□□□□□ -1.3
TRAV40-201ENST00000390467 ABI2Q9NYB9 513 aaPredicted RBP6.9□□□□□ -1.3
TRAV40-201ENST00000390467 FNDC3AQ9Y2H6 1198 aaKnown RBP6.9□□□□□ -1.3
TRAV40-201ENST00000390467 KIF4AO95239 1232 aa6.89□□□□□ -1.31
TRAV40-201ENST00000390467 HYAL2Q12891 473 aa6.89□□□□□ -1.31
TRAV40-201ENST00000390467 ZNF211Q13398 564 aaPredicted RBP6.89□□□□□ -1.31
TRAV40-201ENST00000390467 NOM1Q5C9Z4 860 aaKnown RBP6.89□□□□□ -1.31
TRAV40-201ENST00000390467 TTC39BQ5VTQ0 682 aaPredicted RBP6.89□□□□□ -1.31
TRAV40-201ENST00000390467 PDE12Q6L8Q7 609 aaKnown RBP6.89□□□□□ -1.31
TRAV40-201ENST00000390467 TXNRD3Q86VQ6 643 aa6.89□□□□□ -1.31
TRAV40-201ENST00000390467 SEMA6BQ9H3T3 888 aa6.89□□□□□ -1.31
TRAV40-201ENST00000390467 ELP3Q9H9T3 547 aa6.89□□□□□ -1.31
TRAV40-201ENST00000390467 CNTN3Q9P232 1028 aa6.89□□□□□ -1.31
TRAV40-201ENST00000390467 KANSL3Q9P2N6 904 aa6.89□□□□□ -1.31
TRAV40-201ENST00000390467 SUPT5HO00267 1087 aaKnown RBP6.88□□□□□ -1.31
TRAV40-201ENST00000390467 ZNF438Q7Z4V0 828 aa6.88□□□□□ -1.31
TRAV40-201ENST00000390467 IL22RA1Q8N6P7 574 aa6.88□□□□□ -1.31
TRAV40-201ENST00000390467 ARID3AQ99856 593 aa6.88□□□□□ -1.31
TRAV40-201ENST00000390467 RBSNQ9H1K0 784 aa6.88□□□□□ -1.31
TRAV40-201ENST00000390467 RASSF4Q9H2L5 321 aa6.88□□□□□ -1.31
TRAV40-201ENST00000390467 USP21Q9UK80 565 aa6.88□□□□□ -1.31
TRAV40-201ENST00000390467 DLL1O00548 723 aa6.87□□□□□ -1.31
TRAV40-201ENST00000390467 DYRK3O43781 588 aa6.87□□□□□ -1.31
TRAV40-201ENST00000390467 ACPPP15309 386 aa6.87□□□□□ -1.31
TRAV40-201ENST00000390467 NPR3P17342 541 aa6.87□□□□□ -1.31
TRAV40-201ENST00000390467 SETDB1Q15047 1291 aa6.87□□□□□ -1.31
TRAV40-201ENST00000390467 SSBP4Q9BWG4 385 aaPredicted RBP6.87□□□□□ -1.31
TRAV40-201ENST00000390467 ANO2Q9NQ90 1003 aa6.87□□□□□ -1.31
TRAV40-201ENST00000390467 POLIQ9UNA4 740 aa6.87□□□□□ -1.31
TRAV40-201ENST00000390467 MZF1P28698 734 aaPredicted RBP6.86□□□□□ -1.31
TRAV40-201ENST00000390467 NRG1Q02297 640 aaPredicted RBP6.86□□□□□ -1.31
TRAV40-201ENST00000390467 CEP135Q66GS9 1140 aa6.86□□□□□ -1.31
TRAV40-201ENST00000390467 TXNDC11Q6PKC3 985 aa6.86□□□□□ -1.31
TRAV40-201ENST00000390467 CEP120Q8N960 986 aa6.86□□□□□ -1.31
TRAV40-201ENST00000390467 C1orf127Q8N9H9 656 aa6.86□□□□□ -1.31
TRAV40-201ENST00000390467 LACRTQ9GZZ8 138 aa6.86□□□□□ -1.31
TRAV40-201ENST00000390467 CHRDQ9H2X0 955 aa6.86□□□□□ -1.31
TRAV40-201ENST00000390467 USTQ9Y2C2 406 aa6.86□□□□□ -1.31
TRAV40-201ENST00000390467 FZD6O60353 706 aa6.85□□□□□ -1.31
TRAV40-201ENST00000390467 ABL1P00519 1130 aa6.85□□□□□ -1.31
TRAV40-201ENST00000390467 NOS3P29474 1203 aa6.85□□□□□ -1.31
TRAV40-201ENST00000390467 C8orf34Q49A92 452 aa6.85□□□□□ -1.31
TRAV40-201ENST00000390467 XKR5Q6UX68 686 aa6.85□□□□□ -1.31
TRAV40-201ENST00000390467 IREB2P48200 963 aaKnown RBP6.84□□□□□ -1.31
TRAV40-201ENST00000390467 IGF2-ASQ6U949 168 aa6.84□□□□□ -1.31
TRAV40-201ENST00000390467 NCAPG2Q86XI2 1143 aa6.84□□□□□ -1.31
TRAV40-201ENST00000390467 GALNT11Q8NCW6 608 aa6.84□□□□□ -1.31
TRAV40-201ENST00000390467 WFDC12Q8WWY7 111 aa6.84□□□□□ -1.31
TRAV40-201ENST00000390467 MEGF10Q96KG7 1140 aa6.84□□□□□ -1.31
TRAV40-201ENST00000390467 SPACA7Q96KW9 195 aa6.84□□□□□ -1.31
TRAV40-201ENST00000390467 HHIPQ96QV1 700 aa6.84□□□□□ -1.31
TRAV40-201ENST00000390467 PBX4Q9BYU1 374 aa6.84□□□□□ -1.31
TRAV40-201ENST00000390467 TIMELESSQ9UNS1 1208 aa6.84□□□□□ -1.31
TRAV40-201ENST00000390467 TM4SF5O14894 197 aa6.83□□□□□ -1.32
TRAV40-201ENST00000390467 TRPA1O75762 1119 aa6.83□□□□□ -1.32
TRAV40-201ENST00000390467 SMNDC1O75940 238 aaKnown RBP eCLIP6.83□□□□□ -1.32
TRAV40-201ENST00000390467 EPHA1P21709 976 aa6.83□□□□□ -1.32
TRAV40-201ENST00000390467 FOXD4L6Q3SYB3 417 aaPredicted RBP6.83□□□□□ -1.32
TRAV40-201ENST00000390467 ALKBH2Q6NS38 261 aa6.83□□□□□ -1.32
TRAV40-201ENST00000390467 FOXD4L3Q6VB84 417 aaPredicted RBP6.83□□□□□ -1.32
TRAV40-201ENST00000390467 TP53INP1Q96A56 240 aa6.83□□□□□ -1.32
TRAV40-201ENST00000390467 CCDC87Q9NVE4 849 aa6.83□□□□□ -1.32
TRAV40-201ENST00000390467 SALL4Q9UJQ4 1053 aa6.83□□□□□ -1.32
TRAV40-201ENST00000390467 LINC01387J3KSC0 135 aa6.82□□□□□ -1.32
TRAV40-201ENST00000390467 NFKBIEO00221 500 aa6.82□□□□□ -1.32
TRAV40-201ENST00000390467 FAM13AO94988 1023 aa6.82□□□□□ -1.32
TRAV40-201ENST00000390467 ALX3O95076 343 aa6.82□□□□□ -1.32
TRAV40-201ENST00000390467 WISP1O95388 367 aa6.82□□□□□ -1.32
TRAV40-201ENST00000390467 RPLP1P05386 114 aaKnown RBP6.82□□□□□ -1.32
TRAV40-201ENST00000390467 CES1P23141 567 aa6.82□□□□□ -1.32
TRAV40-201ENST00000390467 CDC25BP30305 580 aa6.82□□□□□ -1.32
TRAV40-201ENST00000390467 SERPINB4P48594 390 aa6.82□□□□□ -1.32
TRAV40-201ENST00000390467 FKBP4Q02790 459 aaKnown RBP eCLIP6.82□□□□□ -1.32
TRAV40-201ENST00000390467 SF3B2Q13435 895 aaKnown RBP6.82□□□□□ -1.32
TRAV40-201ENST00000390467 RETREG2Q8NC44 543 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms