RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 XAGE2Q96GT9 111 aa24.63■■□□□ 1.53
CPNE9-202ENST00000383831 DNAJC2Q99543 621 aaKnown RBP24.63■■□□□ 1.53
CPNE9-202ENST00000383831 SF3B3Q15393 1217 aaKnown RBP24.62■■□□□ 1.53
CPNE9-202ENST00000383831 COL4A1P02462 1669 aa24.62■■□□□ 1.53
CPNE9-202ENST00000383831 PLSCR1O15162 318 aa24.62■■□□□ 1.53
CPNE9-202ENST00000383831 APBA3O96018 575 aa24.62■■□□□ 1.53
CPNE9-202ENST00000383831 SSFA2P28290 1259 aa24.62■■□□□ 1.53
CPNE9-202ENST00000383831 MROH5Q6ZUA9 1318 aa24.61■■□□□ 1.53
CPNE9-202ENST00000383831 HIP1O00291 1037 aa24.61■■□□□ 1.53
CPNE9-202ENST00000383831 PDE8BO95263 885 aa24.61■■□□□ 1.53
CPNE9-202ENST00000383831 RUFY2Q8WXA3 655 aa24.61■■□□□ 1.53
CPNE9-202ENST00000383831 MPHOSPH8Q99549 860 aa24.61■■□□□ 1.53
CPNE9-202ENST00000383831 TPTE2Q6XPS3 522 aa24.6■■□□□ 1.53
CPNE9-202ENST00000383831 IGHMBP2P38935 993 aaKnown RBP24.59■■□□□ 1.53
CPNE9-202ENST00000383831 NFIXQ14938 502 aa24.59■■□□□ 1.53
CPNE9-202ENST00000383831 TNS1Q9HBL0 1735 aaKnown RBP24.59■■□□□ 1.53
CPNE9-202ENST00000383831 EPB41L2O43491 1005 aaKnown RBP24.59■■□□□ 1.53
CPNE9-202ENST00000383831 NMIQ13287 307 aaPredicted RBP24.59■■□□□ 1.53
CPNE9-202ENST00000383831 CCDC158Q5M9N0 1113 aa24.59■■□□□ 1.53
CPNE9-202ENST00000383831 GORABQ5T7V8 394 aa24.59■■□□□ 1.53
CPNE9-202ENST00000383831 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.59■■□□□ 1.53
CPNE9-202ENST00000383831 CARMIL3Q8ND23 1372 aa24.58■■□□□ 1.53
CPNE9-202ENST00000383831 IFIT1P09914 478 aaKnown RBP24.58■■□□□ 1.53
CPNE9-202ENST00000383831 TTC39AQ5SRH9 613 aa24.58■■□□□ 1.53
CPNE9-202ENST00000383831 HELBQ8NG08 1087 aaPredicted RBP24.58■■□□□ 1.53
CPNE9-202ENST00000383831 FAM227BQ96M60 508 aa24.58■■□□□ 1.53
CPNE9-202ENST00000383831 CDC5LQ99459 802 aaKnown RBP24.58■■□□□ 1.53
CPNE9-202ENST00000383831 LSG1Q9H089 658 aaKnown RBP24.58■■□□□ 1.53
CPNE9-202ENST00000383831 RFX7Q2KHR2 1363 aa24.58■■□□□ 1.53
CPNE9-202ENST00000383831 GYS1P13807 737 aa24.57■■□□□ 1.52
CPNE9-202ENST00000383831 HMGB2P26583 209 aaKnown RBP24.57■■□□□ 1.52
CPNE9-202ENST00000383831 DDX46Q7L014 1031 aaKnown RBP24.57■■□□□ 1.52
CPNE9-202ENST00000383831 CCDC24Q8N4L8 307 aa24.57■■□□□ 1.52
CPNE9-202ENST00000383831 SNX21Q969T3 373 aa24.57■■□□□ 1.52
CPNE9-202ENST00000383831 RABEP1Q15276 862 aa24.57■■□□□ 1.52
CPNE9-202ENST00000383831 PAG1Q9NWQ8 432 aa24.57■■□□□ 1.52
CPNE9-202ENST00000383831 ARAP2Q8WZ64 1704 aa24.57■■□□□ 1.52
CPNE9-202ENST00000383831 RAD50Q92878 1312 aa24.57■■□□□ 1.52
CPNE9-202ENST00000383831 FGFR2P21802 821 aa24.56■■□□□ 1.52
CPNE9-202ENST00000383831 MCCP23508 829 aa24.56■■□□□ 1.52
CPNE9-202ENST00000383831 PUM3Q15397 648 aaKnown RBP24.56■■□□□ 1.52
CPNE9-202ENST00000383831 TAF1P21675 1872 aa24.55■■□□□ 1.52
CPNE9-202ENST00000383831 A0A0D9SFI3 127 aa24.55■■□□□ 1.52
CPNE9-202ENST00000383831 GOLIM4O00461 696 aa24.55■■□□□ 1.52
CPNE9-202ENST00000383831 KIAA1211Q6ZU35 1233 aa24.55■■□□□ 1.52
CPNE9-202ENST00000383831 HSCBQ8IWL3 235 aa24.55■■□□□ 1.52
CPNE9-202ENST00000383831 KBTBD3Q8NAB2 608 aa24.55■■□□□ 1.52
CPNE9-202ENST00000383831 NLRP3Q96P20 1036 aa24.55■■□□□ 1.52
CPNE9-202ENST00000383831 TNRC6CQ9HCJ0 1690 aaKnown RBP24.55■■□□□ 1.52
CPNE9-202ENST00000383831 ZNF827Q17R98 1081 aa24.54■■□□□ 1.52
CPNE9-202ENST00000383831 ANKRD18AQ8IVF6 992 aa24.54■■□□□ 1.52
CPNE9-202ENST00000383831 LPIN2Q92539 896 aa24.54■■□□□ 1.52
CPNE9-202ENST00000383831 PALD1Q9ULE6 856 aa24.54■■□□□ 1.52
CPNE9-202ENST00000383831 TAF5LO75529 589 aa24.54■■□□□ 1.52
CPNE9-202ENST00000383831 SNRKQ9NRH2 765 aa24.54■■□□□ 1.52
CPNE9-202ENST00000383831 CD2BP2O95400 341 aaKnown RBP24.53■■□□□ 1.52
CPNE9-202ENST00000383831 SCARF1Q14162 830 aa24.53■■□□□ 1.52
CPNE9-202ENST00000383831 AKT1S1Q96B36 256 aa24.53■■□□□ 1.52
CPNE9-202ENST00000383831 MED23Q9ULK4 1368 aa24.52■■□□□ 1.52
CPNE9-202ENST00000383831 NPHP1O15259 732 aa24.52■■□□□ 1.52
CPNE9-202ENST00000383831 HSPA4P34932 840 aa24.52■■□□□ 1.52
CPNE9-202ENST00000383831 CHRNDQ07001 517 aa24.52■■□□□ 1.52
CPNE9-202ENST00000383831 A0A1B0GUL6 1792 aa24.52■■□□□ 1.52
CPNE9-202ENST00000383831 CNBD1Q8NA66 436 aa24.52■■□□□ 1.52
CPNE9-202ENST00000383831 CELF1Q92879 486 aaKnown RBP24.52■■□□□ 1.52
CPNE9-202ENST00000383831 ANTXR1Q9H6X2 564 aa24.52■■□□□ 1.52
CPNE9-202ENST00000383831 RGPD3A6NKT7 1758 aaPredicted RBP24.51■■□□□ 1.51
CPNE9-202ENST00000383831 RGPD4Q7Z3J3 1758 aa24.51■■□□□ 1.51
CPNE9-202ENST00000383831 SNAP23O00161 211 aa24.51■■□□□ 1.51
CPNE9-202ENST00000383831 CHGBP05060 677 aa24.51■■□□□ 1.51
CPNE9-202ENST00000383831 SLC5A1P13866 664 aa24.51■■□□□ 1.51
CPNE9-202ENST00000383831 ANAPC15P60006 121 aa24.51■■□□□ 1.51
CPNE9-202ENST00000383831 FKBP4Q02790 459 aaKnown RBP eCLIP24.51■■□□□ 1.51
CPNE9-202ENST00000383831 PTH1RQ03431 593 aa24.51■■□□□ 1.51
CPNE9-202ENST00000383831 ZNF512BQ96KM6 892 aaPredicted RBP24.51■■□□□ 1.51
CPNE9-202ENST00000383831 BSDC1Q9NW68 430 aaPredicted RBP24.51■■□□□ 1.51
CPNE9-202ENST00000383831 TFCP2L1Q9NZI6 479 aa24.51■■□□□ 1.51
CPNE9-202ENST00000383831 TM4SF1P30408 202 aa24.5■■□□□ 1.51
CPNE9-202ENST00000383831 IL17RAQ96F46 866 aa24.5■■□□□ 1.51
CPNE9-202ENST00000383831 AKAP11Q9UKA4 1901 aa24.5■■□□□ 1.51
CPNE9-202ENST00000383831 CCDC171Q6TFL3 1326 aa24.5■■□□□ 1.51
CPNE9-202ENST00000383831 CCDC102BQ68D86 513 aa24.49■■□□□ 1.51
CPNE9-202ENST00000383831 MCAMP43121 646 aa24.49■■□□□ 1.51
CPNE9-202ENST00000383831 ZAP70P43403 619 aa24.49■■□□□ 1.51
CPNE9-202ENST00000383831 PHKA1P46020 1223 aa24.49■■□□□ 1.51
CPNE9-202ENST00000383831 PRR5LQ6MZQ0 368 aa24.49■■□□□ 1.51
CPNE9-202ENST00000383831 ZNF589Q86UQ0 364 aaPredicted RBP24.49■■□□□ 1.51
CPNE9-202ENST00000383831 TICAM2Q86XR7 235 aa24.49■■□□□ 1.51
CPNE9-202ENST00000383831 PI16Q6UXB8 463 aa24.48■■□□□ 1.51
CPNE9-202ENST00000383831 ARID4AP29374 1257 aaPredicted RBP24.47■■□□□ 1.51
CPNE9-202ENST00000383831 SERPINB2P05120 415 aa24.47■■□□□ 1.51
CPNE9-202ENST00000383831 RPS8P62241 208 aaKnown RBP24.47■■□□□ 1.51
CPNE9-202ENST00000383831 MINPP1Q9UNW1 487 aa24.47■■□□□ 1.51
CPNE9-202ENST00000383831 UQCRFS1P1P0C7P4 283 aa24.46■■□□□ 1.51
CPNE9-202ENST00000383831 DDR1Q08345 913 aa24.46■■□□□ 1.51
CPNE9-202ENST00000383831 COL23A1Q86Y22 540 aaPredicted RBP24.46■■□□□ 1.51
CPNE9-202ENST00000383831 SEC62Q99442 399 aaKnown RBP24.46■■□□□ 1.51
CPNE9-202ENST00000383831 K7ELQ4 463 aaPredicted RBP24.45■■□□□ 1.5
CPNE9-202ENST00000383831 SLFNL1Q499Z3 407 aa24.45■■□□□ 1.5
CPNE9-202ENST00000383831 SPRYD3Q8NCJ5 442 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms