RNA–Protein interactions for RNA: ENST00000379235.5

UBAP2-203, Transcript of ubiquitin associated protein 2, humanhuman

TSL 1 (best)

Gene UBAP2, Length 2,673 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-203ENST00000379235 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.12□□□□□ -0.31
UBAP2-203ENST00000379235 CEBPZQ03701 1054 aaKnown RBP13.12□□□□□ -0.31
UBAP2-203ENST00000379235 RAD51AP2Q09MP3 1159 aa13.12□□□□□ -0.31
UBAP2-203ENST00000379235 CCDC150Q8NCX0 1101 aa13.12□□□□□ -0.31
UBAP2-203ENST00000379235 SYTL4Q96C24 671 aaPredicted RBP13.12□□□□□ -0.31
UBAP2-203ENST00000379235 PLEKHG3A1L390 1219 aa13.12□□□□□ -0.31
UBAP2-203ENST00000379235 H3BQV1 296 aa13.12□□□□□ -0.31
UBAP2-203ENST00000379235 MLECQ14165 292 aa13.12□□□□□ -0.31
UBAP2-203ENST00000379235 IFFO2Q5TF58 517 aa13.12□□□□□ -0.31
UBAP2-203ENST00000379235 AACSQ86V21 672 aa13.12□□□□□ -0.31
UBAP2-203ENST00000379235 TRERF1Q96PN7 1200 aa13.12□□□□□ -0.31
UBAP2-203ENST00000379235 UBXN6Q9BZV1 441 aa13.12□□□□□ -0.31
UBAP2-203ENST00000379235 HMG20BQ9P0W2 317 aa13.12□□□□□ -0.31
UBAP2-203ENST00000379235 ORC3Q9UBD5 711 aaPredicted RBP13.12□□□□□ -0.31
UBAP2-203ENST00000379235 PA2G4Q9UQ80 394 aaKnown RBP13.12□□□□□ -0.31
UBAP2-203ENST00000379235 PI4KAP2A4QPH2 592 aa13.11□□□□□ -0.31
UBAP2-203ENST00000379235 FAM160A1Q05DH4 1040 aa13.11□□□□□ -0.31
UBAP2-203ENST00000379235 CCDC73Q6ZRK6 1079 aa13.11□□□□□ -0.31
UBAP2-203ENST00000379235 ERC1Q8IUD2 1116 aa13.11□□□□□ -0.31
UBAP2-203ENST00000379235 PI4KAP1Q8N8J0 262 aa13.11□□□□□ -0.31
UBAP2-203ENST00000379235 KINO60870 393 aaKnown RBP13.11□□□□□ -0.31
UBAP2-203ENST00000379235 TUBB4AP04350 444 aa13.11□□□□□ -0.31
UBAP2-203ENST00000379235 ZNF589Q86UQ0 364 aaPredicted RBP13.11□□□□□ -0.31
UBAP2-203ENST00000379235 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.11□□□□□ -0.31
UBAP2-203ENST00000379235 MUM1L1Q5H9M0 696 aa13.1□□□□□ -0.31
UBAP2-203ENST00000379235 TMCO3Q6UWJ1 677 aa13.1□□□□□ -0.31
UBAP2-203ENST00000379235 NEK11Q8NG66 645 aa13.1□□□□□ -0.31
UBAP2-203ENST00000379235 SMARCC2Q8TAQ2 1214 aa13.1□□□□□ -0.31
UBAP2-203ENST00000379235 NWD1Q149M9 1564 aa13.1□□□□□ -0.31
UBAP2-203ENST00000379235 PHLPP2Q6ZVD8 1323 aa13.1□□□□□ -0.31
UBAP2-203ENST00000379235 MAPK8IP2Q13387 824 aaPredicted RBP13.1□□□□□ -0.31
UBAP2-203ENST00000379235 NFATC2IPQ8NCF5 419 aa13.1□□□□□ -0.31
UBAP2-203ENST00000379235 ERCC4Q92889 916 aaPredicted RBP13.1□□□□□ -0.31
UBAP2-203ENST00000379235 TRIM34Q9BYJ4 488 aa13.1□□□□□ -0.31
UBAP2-203ENST00000379235 XPO4Q9C0E2 1151 aaKnown RBP13.1□□□□□ -0.31
UBAP2-203ENST00000379235 CHPF2Q9P2E5 772 aa13.1□□□□□ -0.31
UBAP2-203ENST00000379235 TPM4P67936 248 aa13.09□□□□□ -0.31
UBAP2-203ENST00000379235 USPL1Q5W0Q7 1092 aa13.09□□□□□ -0.31
UBAP2-203ENST00000379235 USP28Q96RU2 1077 aa13.09□□□□□ -0.31
UBAP2-203ENST00000379235 NAT10Q9H0A0 1025 aaKnown RBP13.09□□□□□ -0.31
UBAP2-203ENST00000379235 ARGLU1Q9NWB6 273 aaPredicted RBP13.09□□□□□ -0.31
UBAP2-203ENST00000379235 MYH15Q9Y2K3 1946 aa13.09□□□□□ -0.31
UBAP2-203ENST00000379235 ROBO2Q9HCK4 1378 aa13.09□□□□□ -0.31
UBAP2-203ENST00000379235 ABCC6O95255 1503 aa13.09□□□□□ -0.31
UBAP2-203ENST00000379235 TADA3O75528 432 aa13.09□□□□□ -0.31
UBAP2-203ENST00000379235 SFPQP23246 707 aaKnown RBP eCLIP13.09□□□□□ -0.31
UBAP2-203ENST00000379235 ETF1P62495 437 aaKnown RBP13.09□□□□□ -0.31
UBAP2-203ENST00000379235 TEX35Q5T0J7 233 aa13.09□□□□□ -0.31
UBAP2-203ENST00000379235 NAA16Q6N069 864 aaPredicted RBP13.09□□□□□ -0.31
UBAP2-203ENST00000379235 TMC6Q7Z403 805 aa13.09□□□□□ -0.31
UBAP2-203ENST00000379235 EAF2Q96CJ1 260 aaPredicted RBP13.09□□□□□ -0.31
UBAP2-203ENST00000379235 FSD1Q9BTV5 496 aa13.09□□□□□ -0.31
UBAP2-203ENST00000379235 FANCGO15287 622 aa13.08□□□□□ -0.31
UBAP2-203ENST00000379235 POLR3GO15318 223 aaPredicted RBP13.08□□□□□ -0.31
UBAP2-203ENST00000379235 TAF5LO75529 589 aa13.08□□□□□ -0.31
UBAP2-203ENST00000379235 EIF2S2P20042 333 aaKnown RBP13.08□□□□□ -0.31
UBAP2-203ENST00000379235 TXLNBQ8N3L3 684 aa13.08□□□□□ -0.31
UBAP2-203ENST00000379235 FSIP1Q8NA03 581 aa13.08□□□□□ -0.31
UBAP2-203ENST00000379235 UBXN4Q92575 508 aa13.08□□□□□ -0.31
UBAP2-203ENST00000379235 TLR7Q9NYK1 1049 aaKnown RBP13.08□□□□□ -0.31
UBAP2-203ENST00000379235 COL15A1P39059 1388 aa13.08□□□□□ -0.32
UBAP2-203ENST00000379235 NUTM2FA1L443 756 aa13.08□□□□□ -0.32
UBAP2-203ENST00000379235 SASH1O94885 1247 aa13.08□□□□□ -0.32
UBAP2-203ENST00000379235 SCRN1Q12765 414 aa13.08□□□□□ -0.32
UBAP2-203ENST00000379235 KRT32Q14532 448 aa13.08□□□□□ -0.32
UBAP2-203ENST00000379235 NUTM2GQ5VZR2 741 aa13.08□□□□□ -0.32
UBAP2-203ENST00000379235 FBXW7Q969H0 707 aa13.08□□□□□ -0.32
UBAP2-203ENST00000379235 BPIFA3Q9BQP9 254 aa13.08□□□□□ -0.32
UBAP2-203ENST00000379235 IFNKQ9P0W0 207 aa13.08□□□□□ -0.32
UBAP2-203ENST00000379235 ATP8B1O43520 1251 aa13.07□□□□□ -0.32
UBAP2-203ENST00000379235 SEC31AO94979 1220 aaKnown RBP13.07□□□□□ -0.32
UBAP2-203ENST00000379235 SMC2O95347 1197 aa13.07□□□□□ -0.32
UBAP2-203ENST00000379235 ST5P78524 1137 aa13.07□□□□□ -0.32
UBAP2-203ENST00000379235 DPCR1Q3MIW9 517 aa13.07□□□□□ -0.32
UBAP2-203ENST00000379235 GORABQ5T7V8 394 aa13.07□□□□□ -0.32
UBAP2-203ENST00000379235 TRIM65Q6PJ69 517 aa13.07□□□□□ -0.32
UBAP2-203ENST00000379235 Q6ZUG5 572 aa13.07□□□□□ -0.32
UBAP2-203ENST00000379235 FMR1NBQ8N0W7 255 aaPredicted RBP13.07□□□□□ -0.32
UBAP2-203ENST00000379235 PLCD3Q8N3E9 789 aa13.07□□□□□ -0.32
UBAP2-203ENST00000379235 SMARCE1Q969G3 411 aa13.07□□□□□ -0.32
UBAP2-203ENST00000379235 DNAI1Q9UI46 699 aa13.07□□□□□ -0.32
UBAP2-203ENST00000379235 LMTK3Q96Q04 1460 aa13.07□□□□□ -0.32
UBAP2-203ENST00000379235 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.07□□□□□ -0.32
UBAP2-203ENST00000379235 SASH3O75995 380 aa13.07□□□□□ -0.32
UBAP2-203ENST00000379235 AMPHP49418 695 aa13.07□□□□□ -0.32
UBAP2-203ENST00000379235 NSUN7Q8NE18 718 aaKnown RBP13.07□□□□□ -0.32
UBAP2-203ENST00000379235 NEK1Q96PY6 1258 aa13.07□□□□□ -0.32
UBAP2-203ENST00000379235 CCDC8Q9H0W5 538 aaPredicted RBP13.07□□□□□ -0.32
UBAP2-203ENST00000379235 NEDD4P46934 1319 aa13.07□□□□□ -0.32
UBAP2-203ENST00000379235 PTPRUQ92729 1446 aa13.07□□□□□ -0.32
UBAP2-203ENST00000379235 ALDH1L1O75891 902 aa13.06□□□□□ -0.32
UBAP2-203ENST00000379235 TBC1D8O95759 1140 aa13.06□□□□□ -0.32
UBAP2-203ENST00000379235 EIF4A1P60842 406 aaKnown RBP13.06□□□□□ -0.32
UBAP2-203ENST00000379235 DHX8Q14562 1220 aaKnown RBP13.06□□□□□ -0.32
UBAP2-203ENST00000379235 ATL3Q6DD88 541 aa13.06□□□□□ -0.32
UBAP2-203ENST00000379235 LLPHQ9BRT6 129 aaKnown RBP13.06□□□□□ -0.32
UBAP2-203ENST00000379235 BOLA2Q9H3K6 86 aa13.06□□□□□ -0.32
UBAP2-203ENST00000379235 MED1Q15648 1581 aaPredicted RBP13.06□□□□□ -0.32
UBAP2-203ENST00000379235 HOXB7P09629 217 aa13.06□□□□□ -0.32
UBAP2-203ENST00000379235 CCDC158Q5M9N0 1113 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms