RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 ZNF592Q92610 1267 aa16.61■□□□□ 0.25
SHROOM1-203ENST00000378679 TCEAL9Q9UHQ7 104 aa16.61■□□□□ 0.25
SHROOM1-203ENST00000378679 GOLGA8AA7E2F4 631 aa16.6■□□□□ 0.25
SHROOM1-203ENST00000378679 ZNF444Q8N0Y2 327 aaPredicted RBP16.6■□□□□ 0.25
SHROOM1-203ENST00000378679 EDC3Q96F86 508 aaKnown RBP16.6■□□□□ 0.25
SHROOM1-203ENST00000378679 ZNF287Q9HBT7 754 aa16.6■□□□□ 0.25
SHROOM1-203ENST00000378679 RRP9O43818 475 aaKnown RBP16.6■□□□□ 0.25
SHROOM1-203ENST00000378679 OLFM4Q6UX06 510 aa16.6■□□□□ 0.25
SHROOM1-203ENST00000378679 ZGPATQ8N5A5 531 aaKnown RBP16.6■□□□□ 0.25
SHROOM1-203ENST00000378679 ANKRD20A12PQ8NF67 263 aa16.6■□□□□ 0.25
SHROOM1-203ENST00000378679 CTCFLQ8NI51 663 aaPredicted RBP16.6■□□□□ 0.25
SHROOM1-203ENST00000378679 ORC3Q9UBD5 711 aaPredicted RBP16.6■□□□□ 0.25
SHROOM1-203ENST00000378679 PTPRUQ92729 1446 aa16.6■□□□□ 0.25
SHROOM1-203ENST00000378679 AK2P54819 239 aa16.6■□□□□ 0.25
SHROOM1-203ENST00000378679 MAPK8IP2Q13387 824 aaPredicted RBP16.6■□□□□ 0.25
SHROOM1-203ENST00000378679 NUP62CLQ9H1M0 184 aa16.6■□□□□ 0.25
SHROOM1-203ENST00000378679 SOGA3Q5TF21 947 aa16.59■□□□□ 0.25
SHROOM1-203ENST00000378679 XAGE2Q96GT9 111 aa16.59■□□□□ 0.25
SHROOM1-203ENST00000378679 AOX1Q06278 1338 aa16.59■□□□□ 0.25
SHROOM1-203ENST00000378679 KLF18A0A0U1RQI7 1052 aa16.59■□□□□ 0.25
SHROOM1-203ENST00000378679 TSR1Q2NL82 804 aaKnown RBP16.59■□□□□ 0.25
SHROOM1-203ENST00000378679 NAA16Q6N069 864 aaPredicted RBP16.59■□□□□ 0.25
SHROOM1-203ENST00000378679 CCDC129Q6ZRS4 1044 aa16.59■□□□□ 0.25
SHROOM1-203ENST00000378679 SLC4A4Q9Y6R1 1079 aa16.59■□□□□ 0.25
SHROOM1-203ENST00000378679 TPM1P09493 284 aa16.59■□□□□ 0.25
SHROOM1-203ENST00000378679 CHST3Q7LGC8 479 aa16.59■□□□□ 0.25
SHROOM1-203ENST00000378679 ZBTB1Q9Y2K1 713 aa16.59■□□□□ 0.25
SHROOM1-203ENST00000378679 CPS1P31327 1500 aa16.58■□□□□ 0.25
SHROOM1-203ENST00000378679 LOC102724428A0A0B4J2F2 783 aa16.58■□□□□ 0.25
SHROOM1-203ENST00000378679 BAG3O95817 575 aa16.58■□□□□ 0.25
SHROOM1-203ENST00000378679 SIK1P57059 783 aa16.58■□□□□ 0.25
SHROOM1-203ENST00000378679 SPTY2D1Q68D10 685 aaPredicted RBP16.58■□□□□ 0.25
SHROOM1-203ENST00000378679 PREX1Q8TCU6 1659 aa16.58■□□□□ 0.25
SHROOM1-203ENST00000378679 Q6ZUG5 572 aa16.58■□□□□ 0.24
SHROOM1-203ENST00000378679 ZC3H13Q5T200 1668 aaKnown RBP16.58■□□□□ 0.24
SHROOM1-203ENST00000378679 MIGA1Q8NAN2 632 aa16.58■□□□□ 0.24
SHROOM1-203ENST00000378679 TMOD2Q9NZR1 351 aa16.58■□□□□ 0.24
SHROOM1-203ENST00000378679 TAF5LO75529 589 aa16.57■□□□□ 0.24
SHROOM1-203ENST00000378679 TXLNAP40222 546 aa16.57■□□□□ 0.24
SHROOM1-203ENST00000378679 NOL7Q9UMY1 257 aaKnown RBP16.57■□□□□ 0.24
SHROOM1-203ENST00000378679 RAD50Q92878 1312 aa16.57■□□□□ 0.24
SHROOM1-203ENST00000378679 IBTKQ9P2D0 1353 aaPredicted RBP16.57■□□□□ 0.24
SHROOM1-203ENST00000378679 C1orf167Q5SNV9 1468 aa16.57■□□□□ 0.24
SHROOM1-203ENST00000378679 IARSP41252 1262 aaKnown RBP16.57■□□□□ 0.24
SHROOM1-203ENST00000378679 CRACR2BQ8N4Y2 399 aaPredicted RBP16.57■□□□□ 0.24
SHROOM1-203ENST00000378679 MAGEB6Q8N7X4 407 aa16.57■□□□□ 0.24
SHROOM1-203ENST00000378679 JAG2Q9Y219 1238 aa16.57■□□□□ 0.24
SHROOM1-203ENST00000378679 CDC42BPGQ6DT37 1551 aa16.57■□□□□ 0.24
SHROOM1-203ENST00000378679 TSPY2A6NKD2 308 aa16.56■□□□□ 0.24
SHROOM1-203ENST00000378679 MPHOSPH10O00566 681 aaKnown RBP16.56■□□□□ 0.24
SHROOM1-203ENST00000378679 CAMK4Q16566 473 aa16.56■□□□□ 0.24
SHROOM1-203ENST00000378679 SLF2Q8IX21 1173 aa16.56■□□□□ 0.24
SHROOM1-203ENST00000378679 KBTBD3Q8NAB2 608 aa16.56■□□□□ 0.24
SHROOM1-203ENST00000378679 PIGBQ92521 554 aa16.56■□□□□ 0.24
SHROOM1-203ENST00000378679 CRNKL1Q9BZJ0 848 aaKnown RBP16.56■□□□□ 0.24
SHROOM1-203ENST00000378679 LRRC7Q96NW7 1537 aa16.56■□□□□ 0.24
SHROOM1-203ENST00000378679 DEPDC5O75140 1603 aa16.56■□□□□ 0.24
SHROOM1-203ENST00000378679 TECPR2O15040 1411 aa16.56■□□□□ 0.24
SHROOM1-203ENST00000378679 TPM2P07951 284 aa16.56■□□□□ 0.24
SHROOM1-203ENST00000378679 METAP2P50579 478 aaKnown RBP eCLIP16.56■□□□□ 0.24
SHROOM1-203ENST00000378679 ZNF771Q7L3S4 317 aaPredicted RBP16.56■□□□□ 0.24
SHROOM1-203ENST00000378679 PCMTD1Q96MG8 357 aaPredicted RBP16.56■□□□□ 0.24
SHROOM1-203ENST00000378679 SPATA31D1Q6ZQQ2 1576 aa16.56■□□□□ 0.24
SHROOM1-203ENST00000378679 PUM3Q15397 648 aaKnown RBP16.55■□□□□ 0.24
SHROOM1-203ENST00000378679 FAM182BQ5T319 152 aa16.55■□□□□ 0.24
SHROOM1-203ENST00000378679 CNBD1Q8NA66 436 aa16.55■□□□□ 0.24
SHROOM1-203ENST00000378679 UQCRHLA0A096LP55 91 aa16.55■□□□□ 0.24
SHROOM1-203ENST00000378679 UQCRHP07919 91 aa16.55■□□□□ 0.24
SHROOM1-203ENST00000378679 CATIPQ7Z7H3 387 aa16.55■□□□□ 0.24
SHROOM1-203ENST00000378679 OVOS2A0A0J9YW53 1432 aa16.55■□□□□ 0.24
SHROOM1-203ENST00000378679 OVOS2Q6IE36 1432 aa16.55■□□□□ 0.24
SHROOM1-203ENST00000378679 KIAA1210Q9ULL0 1709 aa16.55■□□□□ 0.24
SHROOM1-203ENST00000378679 IQGAP1P46940 1657 aa16.54■□□□□ 0.24
SHROOM1-203ENST00000378679 ZSCAN22P10073 491 aaPredicted RBP16.54■□□□□ 0.24
SHROOM1-203ENST00000378679 ATP5JP18859 108 aa16.54■□□□□ 0.24
SHROOM1-203ENST00000378679 GIGYF2Q6Y7W6 1299 aaKnown RBP16.54■□□□□ 0.24
SHROOM1-203ENST00000378679 ZBTB38Q8NAP3 1195 aaPredicted RBP16.54■□□□□ 0.24
SHROOM1-203ENST00000378679 COPRSQ9NQ92 184 aa16.54■□□□□ 0.24
SHROOM1-203ENST00000378679 PRC1O43663 620 aa16.54■□□□□ 0.24
SHROOM1-203ENST00000378679 PDE4BQ07343 736 aa16.54■□□□□ 0.24
SHROOM1-203ENST00000378679 MAP3K11Q16584 847 aa16.54■□□□□ 0.24
SHROOM1-203ENST00000378679 LRRC24Q50LG9 513 aa16.54■□□□□ 0.24
SHROOM1-203ENST00000378679 MAP3K15Q6ZN16 1313 aa16.53■□□□□ 0.24
SHROOM1-203ENST00000378679 PCCAP05165 728 aaPredicted RBP16.53■□□□□ 0.24
SHROOM1-203ENST00000378679 SSRP1Q08945 709 aaKnown RBP16.53■□□□□ 0.24
SHROOM1-203ENST00000378679 DHX32Q7L7V1 743 aaKnown RBP16.53■□□□□ 0.24
SHROOM1-203ENST00000378679 ZC3H12CQ9C0D7 883 aaKnown RBP16.53■□□□□ 0.24
SHROOM1-203ENST00000378679 ZHX1Q9UKY1 873 aaPredicted RBP16.53■□□□□ 0.24
SHROOM1-203ENST00000378679 STX8Q9UNK0 236 aa16.53■□□□□ 0.24
SHROOM1-203ENST00000378679 F8W031 263 aaPredicted RBP16.53■□□□□ 0.24
SHROOM1-203ENST00000378679 ZBTB43O43298 467 aa16.53■□□□□ 0.24
SHROOM1-203ENST00000378679 KCNQ4P56696 695 aa16.53■□□□□ 0.24
SHROOM1-203ENST00000378679 RUFY3Q7L099 469 aa16.53■□□□□ 0.24
SHROOM1-203ENST00000378679 CCDC43Q96MW1 224 aaKnown RBP16.53■□□□□ 0.24
SHROOM1-203ENST00000378679 HEG1Q9ULI3 1381 aa16.53■□□□□ 0.24
SHROOM1-203ENST00000378679 MROH1Q8NDA8 1641 aa16.53■□□□□ 0.24
SHROOM1-203ENST00000378679 WTAPQ15007 396 aa16.53■□□□□ 0.24
SHROOM1-203ENST00000378679 SNX14Q9Y5W7 946 aa16.53■□□□□ 0.24
SHROOM1-203ENST00000378679 LPIN2Q92539 896 aa16.52■□□□□ 0.24
SHROOM1-203ENST00000378679 CDK5RAP3Q96JB5 506 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms