RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 PGBD1Q96JS3 809 aa12.95□□□□□ -0.34
BEST1-201ENST00000378043 SPATA32Q96LK8 384 aa12.95□□□□□ -0.34
BEST1-201ENST00000378043 NUP62CLQ9H1M0 184 aa12.95□□□□□ -0.34
BEST1-201ENST00000378043 DACT1Q9NYF0 836 aa12.95□□□□□ -0.34
BEST1-201ENST00000378043 PALLDQ8WX93 1383 aa12.95□□□□□ -0.34
BEST1-201ENST00000378043 A0A0G2JLW4 131 aa12.95□□□□□ -0.34
BEST1-201ENST00000378043 GOLIM4O00461 696 aa12.95□□□□□ -0.34
BEST1-201ENST00000378043 SCRN1Q12765 414 aa12.95□□□□□ -0.34
BEST1-201ENST00000378043 RESTQ13127 1097 aa12.95□□□□□ -0.34
BEST1-201ENST00000378043 BRF1Q92994 677 aa12.95□□□□□ -0.34
BEST1-201ENST00000378043 DDX11Q96FC9 970 aa12.95□□□□□ -0.34
BEST1-201ENST00000378043 MRVI1Q9Y6F6 885 aa12.95□□□□□ -0.34
BEST1-201ENST00000378043 UQCRHLA0A096LP55 91 aa12.94□□□□□ -0.34
BEST1-201ENST00000378043 A1BGP04217 495 aa12.94□□□□□ -0.34
BEST1-201ENST00000378043 UQCRHP07919 91 aa12.94□□□□□ -0.34
BEST1-201ENST00000378043 MAP3K11Q16584 847 aa12.94□□□□□ -0.34
BEST1-201ENST00000378043 C17orf53Q8N3J3 647 aaPredicted RBP12.94□□□□□ -0.34
BEST1-201ENST00000378043 NEUROD6Q96NK8 337 aa12.94□□□□□ -0.34
BEST1-201ENST00000378043 PLCB2Q00722 1185 aa12.94□□□□□ -0.34
BEST1-201ENST00000378043 TYRO3Q06418 890 aa12.94□□□□□ -0.34
BEST1-201ENST00000378043 LRRC24Q50LG9 513 aa12.94□□□□□ -0.34
BEST1-201ENST00000378043 PAG1Q9NWQ8 432 aa12.94□□□□□ -0.34
BEST1-201ENST00000378043 CWC25Q9NXE8 425 aaPredicted RBP12.94□□□□□ -0.34
BEST1-201ENST00000378043 MYH15Q9Y2K3 1946 aa12.94□□□□□ -0.34
BEST1-201ENST00000378043 KCPQ6ZWJ8 1503 aa12.93□□□□□ -0.34
BEST1-201ENST00000378043 RBM43Q6ZSC3 357 aaKnown RBP12.93□□□□□ -0.34
BEST1-201ENST00000378043 CKAP2LQ8IYA6 745 aa12.93□□□□□ -0.34
BEST1-201ENST00000378043 SMARCC2Q8TAQ2 1214 aa12.93□□□□□ -0.34
BEST1-201ENST00000378043 ZNF594Q96JF6 807 aaPredicted RBP12.93□□□□□ -0.34
BEST1-201ENST00000378043 NOLC1Q14978 699 aaKnown RBP eCLIP12.93□□□□□ -0.34
BEST1-201ENST00000378043 SASS6Q6UVJ0 657 aa12.93□□□□□ -0.34
BEST1-201ENST00000378043 GPR108Q9NPR9 543 aa12.93□□□□□ -0.34
BEST1-201ENST00000378043 NR1I2O75469 434 aa12.92□□□□□ -0.34
BEST1-201ENST00000378043 CTDNEP1O95476 244 aa12.92□□□□□ -0.34
BEST1-201ENST00000378043 RBM10P98175 930 aaKnown RBP12.92□□□□□ -0.34
BEST1-201ENST00000378043 ZMYM1Q5SVZ6 1142 aa12.92□□□□□ -0.34
BEST1-201ENST00000378043 FAM200AQ8TCP9 573 aa12.92□□□□□ -0.34
BEST1-201ENST00000378043 KCNF1Q9H3M0 494 aa12.92□□□□□ -0.34
BEST1-201ENST00000378043 ZBTB3Q9H5J0 574 aa12.92□□□□□ -0.34
BEST1-201ENST00000378043 HELLSQ9NRZ9 838 aa12.92□□□□□ -0.34
BEST1-201ENST00000378043 PFKFB2O60825 505 aa12.92□□□□□ -0.34
BEST1-201ENST00000378043 HSP90B1P14625 803 aaKnown RBP12.92□□□□□ -0.34
BEST1-201ENST00000378043 ADD1P35611 737 aaKnown RBP12.92□□□□□ -0.34
BEST1-201ENST00000378043 IL15P40933 162 aaPredicted RBP12.92□□□□□ -0.34
BEST1-201ENST00000378043 EXOSC10Q01780 885 aaKnown RBP12.92□□□□□ -0.34
BEST1-201ENST00000378043 DHX32Q7L7V1 743 aaKnown RBP12.92□□□□□ -0.34
BEST1-201ENST00000378043 LUZP1Q86V48 1076 aa12.92□□□□□ -0.34
BEST1-201ENST00000378043 DSCC1Q9BVC3 393 aa12.92□□□□□ -0.34
BEST1-201ENST00000378043 AGXT2Q9BYV1 514 aa12.92□□□□□ -0.34
BEST1-201ENST00000378043 TNMDQ9H2S6 317 aa12.92□□□□□ -0.34
BEST1-201ENST00000378043 PAPPAQ13219 1627 aa12.92□□□□□ -0.34
BEST1-201ENST00000378043 EYA2O00167 538 aa12.91□□□□□ -0.34
BEST1-201ENST00000378043 HSPD1P10809 573 aaKnown RBP12.91□□□□□ -0.34
BEST1-201ENST00000378043 CADPS2Q86UW7 1296 aa12.91□□□□□ -0.34
BEST1-201ENST00000378043 NSUN7Q8NE18 718 aaKnown RBP12.91□□□□□ -0.34
BEST1-201ENST00000378043 PUS3Q9BZE2 481 aaKnown RBP12.91□□□□□ -0.34
BEST1-201ENST00000378043 SPTLC3Q9NUV7 552 aa12.91□□□□□ -0.34
BEST1-201ENST00000378043 CCDC191Q8NCU4 936 aa12.91□□□□□ -0.34
BEST1-201ENST00000378043 ZCRB1Q8TBF4 217 aaKnown RBP12.91□□□□□ -0.34
BEST1-201ENST00000378043 PDCL3Q9H2J4 239 aa12.91□□□□□ -0.34
BEST1-201ENST00000378043 CLSTN2Q9H4D0 955 aa12.91□□□□□ -0.34
BEST1-201ENST00000378043 PCDH11XQ9BZA7 1347 aa12.91□□□□□ -0.34
BEST1-201ENST00000378043 PCDH11YQ9BZA8 1340 aa12.91□□□□□ -0.34
BEST1-201ENST00000378043 A0A1B0GUL7 405 aa12.9□□□□□ -0.34
BEST1-201ENST00000378043 GOLGA6L4A6NEF3 574 aa12.9□□□□□ -0.34
BEST1-201ENST00000378043 APOBRQ0VD83 1088 aa12.9□□□□□ -0.34
BEST1-201ENST00000378043 LLPHQ9BRT6 129 aaKnown RBP12.9□□□□□ -0.34
BEST1-201ENST00000378043 DDX19AQ9NUU7 478 aaKnown RBP12.9□□□□□ -0.34
BEST1-201ENST00000378043 MAST3O60307 1309 aa12.9□□□□□ -0.34
BEST1-201ENST00000378043 WDR17Q8IZU2 1322 aa12.9□□□□□ -0.34
BEST1-201ENST00000378043 SHANK3Q9BYB0 1731 aa12.9□□□□□ -0.34
BEST1-201ENST00000378043 ERVV-2B6SEH9 535 aa12.9□□□□□ -0.34
BEST1-201ENST00000378043 HMGB1P09429 215 aaKnown RBP12.9□□□□□ -0.34
BEST1-201ENST00000378043 ANO6Q4KMQ2 910 aa12.9□□□□□ -0.34
BEST1-201ENST00000378043 CBX8Q9HC52 389 aa12.9□□□□□ -0.34
BEST1-201ENST00000378043 SPEF2Q9C093 1822 aa12.9□□□□□ -0.35
BEST1-201ENST00000378043 E7EWF7 191 aa12.9□□□□□ -0.35
BEST1-201ENST00000378043 H3BQV1 296 aa12.9□□□□□ -0.35
BEST1-201ENST00000378043 IFFO2Q5TF58 517 aa12.9□□□□□ -0.35
BEST1-201ENST00000378043 SPC24Q8NBT2 197 aa12.9□□□□□ -0.35
BEST1-201ENST00000378043 KIAA1524Q8TCG1 905 aa12.9□□□□□ -0.35
BEST1-201ENST00000378043 ZSCAN16Q9H4T2 348 aaPredicted RBP12.9□□□□□ -0.35
BEST1-201ENST00000378043 NWD2Q9ULI1 1742 aa12.89□□□□□ -0.35
BEST1-201ENST00000378043 FGD1P98174 961 aa12.89□□□□□ -0.35
BEST1-201ENST00000378043 NKX1-1Q15270 411 aaPredicted RBP12.89□□□□□ -0.35
BEST1-201ENST00000378043 FTOQ9C0B1 505 aaKnown RBP eCLIP12.89□□□□□ -0.35
BEST1-201ENST00000378043 NCOA5Q9HCD5 579 aaKnown RBP12.89□□□□□ -0.35
BEST1-201ENST00000378043 FAM13BQ9NYF5 915 aa12.89□□□□□ -0.35
BEST1-201ENST00000378043 PYCARDQ9ULZ3 195 aa12.89□□□□□ -0.35
BEST1-201ENST00000378043 SALL1Q9NSC2 1324 aa12.89□□□□□ -0.35
BEST1-201ENST00000378043 XIRP1Q702N8 1843 aaKnown RBP12.89□□□□□ -0.35
BEST1-201ENST00000378043 M0R2C6 588 aa12.89□□□□□ -0.35
BEST1-201ENST00000378043 DYNC1I1O14576 645 aa12.89□□□□□ -0.35
BEST1-201ENST00000378043 FOXP2O15409 715 aa12.89□□□□□ -0.35
BEST1-201ENST00000378043 RNF113AO15541 343 aaKnown RBP12.89□□□□□ -0.35
BEST1-201ENST00000378043 CIAO1O76071 339 aa12.89□□□□□ -0.35
BEST1-201ENST00000378043 IFIT1P09914 478 aaKnown RBP12.89□□□□□ -0.35
BEST1-201ENST00000378043 CCT2P78371 535 aaKnown RBP12.89□□□□□ -0.35
BEST1-201ENST00000378043 TTLL5Q6EMB2 1281 aa12.89□□□□□ -0.35
BEST1-201ENST00000378043 TOM1L2Q6ZVM7 507 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms