RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 U2AF1L5P0DN76 240 aaPredicted RBP14.43□□□□□ -0.1
DDX39B-201ENST00000376177 U2AF1Q01081 240 aaKnown RBP eCLIP14.43□□□□□ -0.17e-15■■■□□ 14.8
DDX39B-201ENST00000376177 PARP10Q53GL7 1025 aa14.43□□□□□ -0.1
DDX39B-201ENST00000376177 PRAMEF18Q5VWM3 479 aa14.43□□□□□ -0.1
DDX39B-201ENST00000376177 FBXO46Q6PJ61 603 aaPredicted RBP14.43□□□□□ -0.1
DDX39B-201ENST00000376177 SULF1Q8IWU6 871 aa14.43□□□□□ -0.1
DDX39B-201ENST00000376177 GPSM2P81274 684 aa14.42□□□□□ -0.1
DDX39B-201ENST00000376177 PDIA6Q15084 440 aa14.42□□□□□ -0.1
DDX39B-201ENST00000376177 ANGEL2Q5VTE6 544 aaKnown RBP14.42□□□□□ -0.1
DDX39B-201ENST00000376177 DDX46Q7L014 1031 aaKnown RBP14.42□□□□□ -0.1
DDX39B-201ENST00000376177 ZNF646O15015 1829 aaPredicted RBP14.42□□□□□ -0.1
DDX39B-201ENST00000376177 CELF1Q92879 486 aaKnown RBP14.41□□□□□ -0.1
DDX39B-201ENST00000376177 NSFL1CQ9UNZ2 370 aaKnown RBP14.41□□□□□ -0.1
DDX39B-201ENST00000376177 C6orf229H3BNL8 230 aa14.41□□□□□ -0.1
DDX39B-201ENST00000376177 SCARF1Q14162 830 aa14.41□□□□□ -0.1
DDX39B-201ENST00000376177 NLRP10Q86W26 655 aa14.41□□□□□ -0.1
DDX39B-201ENST00000376177 HTATSF1O43719 755 aaKnown RBP14.4□□□□□ -0.1
DDX39B-201ENST00000376177 RPS12P25398 132 aaKnown RBP14.4□□□□□ -0.1
DDX39B-201ENST00000376177 REM2Q8IYK8 340 aaPredicted RBP14.39□□□□□ -0.11
DDX39B-201ENST00000376177 VIL1P09327 827 aaKnown RBP14.38□□□□□ -0.11
DDX39B-201ENST00000376177 EIF2S2P20042 333 aaKnown RBP14.38□□□□□ -0.11
DDX39B-201ENST00000376177 TM4SF4P48230 202 aa14.38□□□□□ -0.11
DDX39B-201ENST00000376177 NECTIN2Q92692 538 aa14.38□□□□□ -0.11
DDX39B-201ENST00000376177 TRMT112Q9UI30 125 aaKnown RBP14.38□□□□□ -0.11
DDX39B-201ENST00000376177 COL6A3P12111 3177 aa14.37□□□□□ -0.11
DDX39B-201ENST00000376177 AIMP1Q12904 312 aaKnown RBP14.37□□□□□ -0.11
DDX39B-201ENST00000376177 TBC1D16Q8TBP0 767 aa14.37□□□□□ -0.11
DDX39B-201ENST00000376177 COLQQ9Y215 455 aaPredicted RBP14.37□□□□□ -0.11
DDX39B-201ENST00000376177 KIAA0100Q14667 2235 aaKnown RBP14.37□□□□□ -0.11
DDX39B-201ENST00000376177 FKTNO75072 461 aa14.36□□□□□ -0.11
DDX39B-201ENST00000376177 EN2P19622 333 aaPredicted RBP14.36□□□□□ -0.11
DDX39B-201ENST00000376177 ZNF280AP59817 542 aaPredicted RBP14.36□□□□□ -0.11
DDX39B-201ENST00000376177 CFAP53Q96M91 514 aa14.36□□□□□ -0.11
DDX39B-201ENST00000376177 SH3TC1Q8TE82 1336 aa14.36□□□□□ -0.11
DDX39B-201ENST00000376177 COPS6Q7L5N1 327 aa14.36□□□□□ -0.11
DDX39B-201ENST00000376177 FZD1Q9UP38 647 aa14.36□□□□□ -0.11
DDX39B-201ENST00000376177 NUDCQ9Y266 331 aa14.36□□□□□ -0.11
DDX39B-201ENST00000376177 ERBB4Q15303 1308 aa14.35□□□□□ -0.11
DDX39B-201ENST00000376177 LAMB1P07942 1786 aa14.35□□□□□ -0.11
DDX39B-201ENST00000376177 ANP32CO43423 234 aa14.35□□□□□ -0.11
DDX39B-201ENST00000376177 NEFLP07196 543 aa14.35□□□□□ -0.11
DDX39B-201ENST00000376177 CAP1Q01518 475 aa14.35□□□□□ -0.11
DDX39B-201ENST00000376177 NOM1Q5C9Z4 860 aaKnown RBP14.35□□□□□ -0.11
DDX39B-201ENST00000376177 PNISRQ8TF01 805 aaKnown RBP14.35□□□□□ -0.11
DDX39B-201ENST00000376177 XAGE3Q8WTP9 111 aa14.35□□□□□ -0.11
DDX39B-201ENST00000376177 TRIM17Q9Y577 477 aa14.35□□□□□ -0.11
DDX39B-201ENST00000376177 SPEF2Q9C093 1822 aa14.34□□□□□ -0.11
DDX39B-201ENST00000376177 RANBP2P49792 3224 aaKnown RBP14.34□□□□□ -0.11
DDX39B-201ENST00000376177 FKBP1BP68106 108 aa14.34□□□□□ -0.11
DDX39B-201ENST00000376177 PTPN12Q05209 780 aaKnown RBP14.34□□□□□ -0.11
DDX39B-201ENST00000376177 TCIRG1Q13488 830 aa14.34□□□□□ -0.11
DDX39B-201ENST00000376177 PRKG1Q13976 671 aa14.34□□□□□ -0.11
DDX39B-201ENST00000376177 TTLL12Q14166 644 aaPredicted RBP14.34□□□□□ -0.11
DDX39B-201ENST00000376177 NBPF9Q3BBW0 867 aa14.34□□□□□ -0.11
DDX39B-201ENST00000376177 RTL5Q5HYW3 569 aaPredicted RBP14.34□□□□□ -0.11
DDX39B-201ENST00000376177 TMC4Q7Z404 712 aa14.34□□□□□ -0.11
DDX39B-201ENST00000376177 FAM89AQ96GI7 184 aa14.34□□□□□ -0.11
DDX39B-201ENST00000376177 MYOZ2Q9NPC6 264 aa14.34□□□□□ -0.11
DDX39B-201ENST00000376177 A0A0C4DFX4 3053 aa14.34□□□□□ -0.11
DDX39B-201ENST00000376177 PPP2R1AP30153 589 aa14.33□□□□□ -0.12
DDX39B-201ENST00000376177 RSBN1LQ6PCB5 846 aaPredicted RBP14.33□□□□□ -0.12
DDX39B-201ENST00000376177 OTOP1Q7RTM1 612 aa14.33□□□□□ -0.12
DDX39B-201ENST00000376177 GMLQ99445 158 aa14.33□□□□□ -0.12
DDX39B-201ENST00000376177 MXD3Q9BW11 206 aa14.33□□□□□ -0.12
DDX39B-201ENST00000376177 TRIOBPQ9H2D6 2365 aa14.33□□□□□ -0.12
DDX39B-201ENST00000376177 WTIPA6NIX2 430 aaPredicted RBP14.32□□□□□ -0.12
DDX39B-201ENST00000376177 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.32□□□□□ -0.12
DDX39B-201ENST00000376177 ZNF609O15014 1411 aa14.32□□□□□ -0.12
DDX39B-201ENST00000376177 UFL1O94874 794 aa14.31□□□□□ -0.12
DDX39B-201ENST00000376177 SF3B3Q15393 1217 aaKnown RBP14.31□□□□□ -0.12
DDX39B-201ENST00000376177 EYA3Q99504 573 aa14.31□□□□□ -0.12
DDX39B-201ENST00000376177 CFHR5Q9BXR6 569 aa14.31□□□□□ -0.12
DDX39B-201ENST00000376177 ZC3H12CQ9C0D7 883 aaKnown RBP14.31□□□□□ -0.12
DDX39B-201ENST00000376177 PITPNM2Q9BZ72 1349 aa14.31□□□□□ -0.12
DDX39B-201ENST00000376177 CEP290O15078 2479 aa14.31□□□□□ -0.12
DDX39B-201ENST00000376177 ZSWIM8A7E2V4 1837 aa14.31□□□□□ -0.12
DDX39B-201ENST00000376177 PLEKHF1Q96S99 279 aa14.31□□□□□ -0.12
DDX39B-201ENST00000376177 SEC31BQ9NQW1 1179 aa14.31□□□□□ -0.12
DDX39B-201ENST00000376177 ATP5J2-PTCD1G3V325 749 aa14.3□□□□□ -0.12
DDX39B-201ENST00000376177 USP17L8P0C7I0 530 aa14.3□□□□□ -0.12
DDX39B-201ENST00000376177 KRT24Q2M2I5 525 aa14.3□□□□□ -0.12
DDX39B-201ENST00000376177 HSP90AB3PQ58FF7 597 aa14.3□□□□□ -0.12
DDX39B-201ENST00000376177 AGBL3Q8NEM8 1001 aa14.3□□□□□ -0.12
DDX39B-201ENST00000376177 TSPYL4Q9UJ04 414 aa14.3□□□□□ -0.12
DDX39B-201ENST00000376177 SREBF2Q12772 1141 aa14.29□□□□□ -0.12
DDX39B-201ENST00000376177 CD99L2Q8TCZ2 262 aa14.29□□□□□ -0.12
DDX39B-201ENST00000376177 G3V3G9 751 aa14.28□□□□□ -0.12
DDX39B-201ENST00000376177 IGF2BP3O00425 579 aaKnown RBP eCLIP14.28□□□□□ -0.12
DDX39B-201ENST00000376177 DLL1O00548 723 aa14.28□□□□□ -0.12
DDX39B-201ENST00000376177 SASH1O94885 1247 aa14.28□□□□□ -0.12
DDX39B-201ENST00000376177 RPS8P62241 208 aaKnown RBP14.28□□□□□ -0.12
DDX39B-201ENST00000376177 NFE2L2Q16236 605 aa14.28□□□□□ -0.12
DDX39B-201ENST00000376177 DCAF8Q5TAQ9 597 aa14.28□□□□□ -0.12
DDX39B-201ENST00000376177 ERICH6BQ5W0A0 696 aa14.28□□□□□ -0.12
DDX39B-201ENST00000376177 SPRYD7Q5W111 196 aa14.28□□□□□ -0.12
DDX39B-201ENST00000376177 INTS3Q68E01 1043 aaKnown RBP14.28□□□□□ -0.12
DDX39B-201ENST00000376177 TSHZ2Q9NRE2 1034 aa14.28□□□□□ -0.12
DDX39B-201ENST00000376177 PODXL2Q9NZ53 605 aa14.28□□□□□ -0.12
DDX39B-201ENST00000376177 PTPN22Q9Y2R2 807 aa14.28□□□□□ -0.12
DDX39B-201ENST00000376177 H0YGN5 161 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms