RNA–Protein interactions for RNA: ENST00000375394.6

SKIV2L-201, Transcript of Ski2 like RNA helicase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKIV2L, Length 3,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-201ENST00000375394 ORC3Q9UBD5 711 aaPredicted RBP12.78□□□□□ -0.36
SKIV2L-201ENST00000375394 LRRC7Q96NW7 1537 aa12.78□□□□□ -0.36
SKIV2L-201ENST00000375394 SLC3A2P08195 630 aaKnown RBP12.78□□□□□ -0.36
SKIV2L-201ENST00000375394 TPM1P09493 284 aa12.78□□□□□ -0.36
SKIV2L-201ENST00000375394 GPTP24298 496 aa12.78□□□□□ -0.36
SKIV2L-201ENST00000375394 NBPF6Q5VWK0 638 aa12.78□□□□□ -0.36
SKIV2L-201ENST00000375394 NFATC2IPQ8NCF5 419 aa12.78□□□□□ -0.36
SKIV2L-201ENST00000375394 CACTINQ8WUQ7 758 aaKnown RBP12.78□□□□□ -0.36
SKIV2L-201ENST00000375394 NBPF4Q96M43 638 aa12.78□□□□□ -0.36
SKIV2L-201ENST00000375394 GJB4Q9NTQ9 266 aa12.78□□□□□ -0.36
SKIV2L-201ENST00000375394 CPSF1Q10570 1443 aaKnown RBP12.77□□□□□ -0.36
SKIV2L-201ENST00000375394 AK7Q96M32 723 aa12.77□□□□□ -0.36
SKIV2L-201ENST00000375394 TUBB4AP04350 444 aa12.77□□□□□ -0.37
SKIV2L-201ENST00000375394 AKAP17AQ02040 695 aaKnown RBP12.77□□□□□ -0.37
SKIV2L-201ENST00000375394 TDRD7Q8NHU6 1098 aaKnown RBP12.77□□□□□ -0.37
SKIV2L-201ENST00000375394 KLF18A0A0U1RQI7 1052 aa12.77□□□□□ -0.37
SKIV2L-201ENST00000375394 CABP4P57796 275 aa12.77□□□□□ -0.37
SKIV2L-201ENST00000375394 PPARDQ03181 441 aa12.77□□□□□ -0.37
SKIV2L-201ENST00000375394 GPIHBP1Q8IV16 184 aa12.77□□□□□ -0.37
SKIV2L-201ENST00000375394 EFCAB6Q5THR3 1501 aa12.76□□□□□ -0.37
SKIV2L-201ENST00000375394 ZBTB22O15209 634 aa12.76□□□□□ -0.37
SKIV2L-201ENST00000375394 KARSQ15046 597 aaKnown RBP12.76□□□□□ -0.37
SKIV2L-201ENST00000375394 TM6SF1Q9BZW5 370 aa12.76□□□□□ -0.37
SKIV2L-201ENST00000375394 PHF8Q9UPP1 1060 aa12.76□□□□□ -0.37
SKIV2L-201ENST00000375394 RPAP1Q9BWH6 1393 aaPredicted RBP12.76□□□□□ -0.37
SKIV2L-201ENST00000375394 SSH3Q8TE77 659 aa12.76□□□□□ -0.37
SKIV2L-201ENST00000375394 MYO3AQ8NEV4 1616 aa12.76□□□□□ -0.37
SKIV2L-201ENST00000375394 KRT32Q14532 448 aa12.76□□□□□ -0.37
SKIV2L-201ENST00000375394 C11orf57Q6ZUT1 292 aaPredicted RBP12.76□□□□□ -0.37
SKIV2L-201ENST00000375394 ELP1O95163 1332 aa12.76□□□□□ -0.37
SKIV2L-201ENST00000375394 COL3A1P02461 1466 aaPredicted RBP12.76□□□□□ -0.37
SKIV2L-201ENST00000375394 TULP4Q9NRJ4 1543 aa12.76□□□□□ -0.37
SKIV2L-201ENST00000375394 RPS6KB1P23443 525 aa12.75□□□□□ -0.37
SKIV2L-201ENST00000375394 ARHGAP29Q52LW3 1261 aa12.75□□□□□ -0.37
SKIV2L-201ENST00000375394 NOM1Q5C9Z4 860 aaKnown RBP12.75□□□□□ -0.37
SKIV2L-201ENST00000375394 TXLNBQ8N3L3 684 aa12.75□□□□□ -0.37
SKIV2L-201ENST00000375394 CNNM1Q9NRU3 951 aa12.75□□□□□ -0.37
SKIV2L-201ENST00000375394 CEP126Q9P2H0 1117 aa12.75□□□□□ -0.37
SKIV2L-201ENST00000375394 EDC4Q6P2E9 1401 aaKnown RBP12.75□□□□□ -0.37
SKIV2L-201ENST00000375394 PHACTR2O75167 634 aa12.75□□□□□ -0.37
SKIV2L-201ENST00000375394 ERCC6LQ2NKX8 1250 aa12.75□□□□□ -0.37
SKIV2L-201ENST00000375394 KSR2Q6VAB6 950 aa12.75□□□□□ -0.37
SKIV2L-201ENST00000375394 FUCA2Q9BTY2 467 aa12.75□□□□□ -0.37
SKIV2L-201ENST00000375394 GPHNQ9NQX3 736 aaPredicted RBP12.75□□□□□ -0.37
SKIV2L-201ENST00000375394 IQSEC3Q9UPP2 1182 aaPredicted RBP12.75□□□□□ -0.37
SKIV2L-201ENST00000375394 FLT4P35916 1363 aa12.75□□□□□ -0.37
SKIV2L-201ENST00000375394 GNG11P61952 73 aa12.75□□□□□ -0.37
SKIV2L-201ENST00000375394 LRRC8AQ8IWT6 810 aa12.75□□□□□ -0.37
SKIV2L-201ENST00000375394 PI4K2BQ8TCG2 481 aa12.75□□□□□ -0.37
SKIV2L-201ENST00000375394 MYL10Q9BUA6 226 aa12.75□□□□□ -0.37
SKIV2L-201ENST00000375394 SETD1BQ9UPS6 1966 aaKnown RBP12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 USP27XA6NNY8 438 aa12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 CCDC150Q8NCX0 1101 aa12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 USP28Q96RU2 1077 aa12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 ZSCAN16Q9H4T2 348 aaPredicted RBP12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 AP5Z1O43299 807 aa12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 TOP1P11387 765 aaKnown RBP12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 IBSPP21815 317 aaPredicted RBP12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 CDC25BP30305 580 aa12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 CCDC57Q2TAC2 916 aa12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 CCDC158Q5M9N0 1113 aa12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 UTP14AQ9BVJ6 771 aaKnown RBP12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 KCNA6P17658 529 aa12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 STX17P56962 302 aa12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 COL9A3Q14050 684 aaPredicted RBP12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 ANKRD13DQ6ZTN6 518 aa12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 ANKRD24Q8TF21 1146 aa12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 MRFAP1L1Q96HT8 127 aa12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 ADGRB3O60242 1522 aa12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 MAP3K5Q99683 1374 aa12.74□□□□□ -0.37
SKIV2L-201ENST00000375394 TTC41PQ6P2S7 1318 aa12.73□□□□□ -0.37
SKIV2L-201ENST00000375394 SLFN14P0C7P3 912 aa12.73□□□□□ -0.37
SKIV2L-201ENST00000375394 TTC14Q96N46 770 aa12.73□□□□□ -0.37
SKIV2L-201ENST00000375394 TATP17735 454 aaPredicted RBP12.73□□□□□ -0.37
SKIV2L-201ENST00000375394 LTKP29376 864 aa12.73□□□□□ -0.37
SKIV2L-201ENST00000375394 MCM6Q14566 821 aa12.73□□□□□ -0.37
SKIV2L-201ENST00000375394 SAFBQ15424 915 aaKnown RBP eCLIP12.73□□□□□ -0.37
SKIV2L-201ENST00000375394 DDX17Q92841 729 aaKnown RBP12.73□□□□□ -0.37
SKIV2L-201ENST00000375394 ST7Q9NRC1 585 aa12.73□□□□□ -0.37
SKIV2L-201ENST00000375394 DNA2P51530 1060 aa12.73□□□□□ -0.37
SKIV2L-201ENST00000375394 CCDC144BQ3MJ40 725 aa12.73□□□□□ -0.37
SKIV2L-201ENST00000375394 CCDC102AQ96A19 550 aa12.73□□□□□ -0.37
SKIV2L-201ENST00000375394 U3KPZ7 1027 aaPredicted RBP12.73□□□□□ -0.37
SKIV2L-201ENST00000375394 UBASH3AP57075 661 aa12.72□□□□□ -0.37
SKIV2L-201ENST00000375394 HELBQ8NG08 1087 aaPredicted RBP12.72□□□□□ -0.37
SKIV2L-201ENST00000375394 RAD21O60216 631 aa12.72□□□□□ -0.37
SKIV2L-201ENST00000375394 EIF4A1P60842 406 aaKnown RBP12.72□□□□□ -0.37
SKIV2L-201ENST00000375394 BEND3Q5T5X7 828 aa12.72□□□□□ -0.37
SKIV2L-201ENST00000375394 CNNM3Q8NE01 707 aa12.72□□□□□ -0.37
SKIV2L-201ENST00000375394 MRPS27Q92552 414 aaKnown RBP12.72□□□□□ -0.37
SKIV2L-201ENST00000375394 ZKSCAN3Q9BRR0 538 aa12.72□□□□□ -0.37
SKIV2L-201ENST00000375394 ZSWIM6Q9HCJ5 1215 aa12.72□□□□□ -0.37
SKIV2L-201ENST00000375394 LZTFL1Q9NQ48 299 aa12.72□□□□□ -0.37
SKIV2L-201ENST00000375394 EVA1CP58658 441 aa12.72□□□□□ -0.37
SKIV2L-201ENST00000375394 IMMTQ16891 758 aaKnown RBP12.72□□□□□ -0.37
SKIV2L-201ENST00000375394 MCMDC2Q4G0Z9 681 aa12.72□□□□□ -0.37
SKIV2L-201ENST00000375394 LEKR1Q6ZMV7 388 aa12.72□□□□□ -0.37
SKIV2L-201ENST00000375394 PLA2G4DQ86XP0 818 aa12.72□□□□□ -0.37
SKIV2L-201ENST00000375394 SRRTQ9BXP5 876 aaKnown RBP12.72□□□□□ -0.37
SKIV2L-201ENST00000375394 TRIM34Q9BYJ4 488 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms