RNA–Protein interactions for RNA: ENST00000374767.4

NIPSNAP3A-201, Transcript of nipsnap homolog 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP3A, Length 1,633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-201ENST00000374767 TAF5LO75529 589 aa16.77■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 FGFR2P21802 821 aa16.77■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 HMGB2P26583 209 aaKnown RBP16.77■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 ATP2B3Q16720 1220 aa16.77■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 LRRFIP1Q32MZ4 808 aaKnown RBP16.77■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 SPRYD3Q8NCJ5 442 aa16.77■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 HELLSQ9NRZ9 838 aa16.77■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 RTCBQ9Y3I0 505 aaKnown RBP16.77■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 BCORQ6W2J9 1755 aa16.76■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 HSP90AA1P07900 732 aaKnown RBP16.76■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 CUL4AQ13619 759 aa16.76■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 MCMDC2Q4G0Z9 681 aa16.76■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 FAM196AQ6ZSG2 479 aa16.76■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 SPEF2Q9C093 1822 aa16.76■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 SSFA2P28290 1259 aa16.75■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 ADORA1P30542 326 aa16.75■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 FAM182BQ5T319 152 aa16.75■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 LPIN2Q92539 896 aa16.75■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 INTS4Q96HW7 963 aaKnown RBP16.75■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 TTC14Q96N46 770 aa16.75■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 NYXQ9GZU5 481 aa16.75■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 HMG20BQ9P0W2 317 aa16.75■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 RBM8AQ9Y5S9 174 aaKnown RBP16.75■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 MYH3P11055 1940 aa16.75■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 GOLIM4O00461 696 aa16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 FRAT2O75474 233 aaPredicted RBP16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 ZKSCAN1P17029 563 aaPredicted RBP16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 ADRA2BP18089 450 aa16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 KCNQ4P56696 695 aa16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 RAB3GAP1Q15042 981 aa16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 PUM3Q15397 648 aaKnown RBP16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 TTC39AQ5SRH9 613 aa16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 ZMYM1Q5SVZ6 1142 aa16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 GORABQ5T7V8 394 aa16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 RNF20Q5VTR2 975 aa16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 DDX46Q7L014 1031 aaKnown RBP16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 TMX3Q96JJ7 454 aa16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 ZSWIM6Q9HCJ5 1215 aa16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 LY75O60449 1722 aa16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 GNPATO15228 680 aa16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 ZPR1O75312 459 aa16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 ZFYP08048 801 aaPredicted RBP16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 CREB3L3Q68CJ9 461 aa16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 ZNF589Q86UQ0 364 aaPredicted RBP16.74■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 SLC27A3Q5K4L6 730 aa16.73■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 TBC1D9BQ66K14 1250 aa16.73■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 PRPF40BQ6NWY9 871 aaKnown RBP16.73■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 CLEC17AQ6ZS10 378 aa16.73■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 ARHGEF1Q92888 912 aaKnown RBP16.73■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 CDC5LQ99459 802 aaKnown RBP16.73■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 MPHOSPH8Q99549 860 aa16.73■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 NDUFB9Q9Y6M9 179 aa16.73■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 SLC27A2O14975 620 aa16.72■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 RNF113AO15541 343 aaKnown RBP16.72■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 ARID4AP29374 1257 aaPredicted RBP16.72■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 IGHMBP2P38935 993 aaKnown RBP16.72■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 VPS53Q5VIR6 699 aa16.72■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 KRT27Q7Z3Y8 459 aa16.72■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 SETDB2Q96T68 719 aa16.72■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 ALDH8A1Q9H2A2 487 aaPredicted RBP16.72■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 U3KPZ7 1027 aaPredicted RBP16.72■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 SCN7AQ01118 1682 aa16.72■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 SBF2Q86WG5 1849 aa16.71■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 UQCRFS1P1P0C7P4 283 aa16.71■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 PSMA5P28066 241 aa16.71■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 ERFEQ4G0M1 354 aa16.71■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 TRAPPC3LQ5T215 181 aa16.71■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 DSCC1Q9BVC3 393 aa16.71■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 UPF3BQ9BZI7 483 aaKnown RBP16.71■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 SEC31BQ9NQW1 1179 aa16.71■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 RPAP1Q9BWH6 1393 aaPredicted RBP16.71■□□□□ 0.27
NIPSNAP3A-201ENST00000374767 LAMB2P55268 1798 aa16.71■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 FAM177BA6PVY3 158 aa16.7■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 NUCB2P80303 420 aa16.7■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 DDX60Q8IY21 1712 aaKnown RBP16.7■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 SLC5A1P13866 664 aa16.7■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 SCARF1Q14162 830 aa16.7■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 KRT32Q14532 448 aa16.7■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 TTF1Q15361 905 aaPredicted RBP16.7■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 ZNF772Q68DY9 489 aaPredicted RBP16.7■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 TPTE2Q6XPS3 522 aa16.7■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 RUFY3Q7L099 469 aa16.7■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 LRRC4BQ9NT99 713 aa16.7■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 BSDC1Q9NW68 430 aaPredicted RBP16.7■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 CYP46A1Q9Y6A2 500 aa16.7■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 CYP2E1P05181 493 aaPredicted RBP16.69■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 MCM4P33991 863 aa16.69■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 MCAMP43121 646 aa16.69■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 KCNJ4P48050 445 aa16.69■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 FKBP4Q02790 459 aaKnown RBP eCLIP16.69■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 CCDC102BQ68D86 513 aa16.69■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 AMIGO3Q86WK7 504 aa16.69■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 SEC62Q99442 399 aaKnown RBP16.69■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 SRP68Q9UHB9 627 aaKnown RBP16.69■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 CASTP20810 708 aaKnown RBP16.68■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 ZAP70P43403 619 aa16.68■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 RBM6P78332 1123 aaKnown RBP16.68■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 ADCK5Q3MIX3 580 aa16.68■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 JAKMIP1Q96N16 626 aaKnown RBP16.68■□□□□ 0.26
NIPSNAP3A-201ENST00000374767 LIMCH1Q9UPQ0 1083 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms