RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 SND1Q7KZF4 910 aaKnown RBP eCLIP17.57■□□□□ 0.4
SRPK1-204ENST00000373825 ARHGAP45Q92619 1136 aa17.57■□□□□ 0.4
SRPK1-204ENST00000373825 TAF4BQ92750 862 aa17.57■□□□□ 0.4
SRPK1-204ENST00000373825 IMPACTQ9P2X3 320 aa17.57■□□□□ 0.4
SRPK1-204ENST00000373825 RRS1Q15050 365 aaKnown RBP17.56■□□□□ 0.4
SRPK1-204ENST00000373825 CFAP58Q5T655 872 aa17.56■□□□□ 0.4
SRPK1-204ENST00000373825 CKAP4Q07065 602 aaKnown RBP17.56■□□□□ 0.4
SRPK1-204ENST00000373825 CCDC178Q5BJE1 867 aa17.56■□□□□ 0.4
SRPK1-204ENST00000373825 RNF40O75150 1001 aa17.56■□□□□ 0.4
SRPK1-204ENST00000373825 TUBBP07437 444 aa17.56■□□□□ 0.4
SRPK1-204ENST00000373825 TRMT2AQ8IZ69 625 aaKnown RBP17.56■□□□□ 0.4
SRPK1-204ENST00000373825 FAM71BQ8TC56 605 aa17.56■□□□□ 0.4
SRPK1-204ENST00000373825 TMCO5BA8MYB1 307 aa17.55■□□□□ 0.4
SRPK1-204ENST00000373825 ATP8B1O43520 1251 aa17.55■□□□□ 0.4
SRPK1-204ENST00000373825 VAMP4O75379 141 aa17.55■□□□□ 0.4
SRPK1-204ENST00000373825 ACTN3Q08043 901 aaPredicted RBP17.55■□□□□ 0.4
SRPK1-204ENST00000373825 MTMR6Q9Y217 621 aa17.55■□□□□ 0.4
SRPK1-204ENST00000373825 KRT24Q2M2I5 525 aa17.55■□□□□ 0.4
SRPK1-204ENST00000373825 RABGGTAQ92696 567 aa17.55■□□□□ 0.4
SRPK1-204ENST00000373825 SNX14Q9Y5W7 946 aa17.55■□□□□ 0.4
SRPK1-204ENST00000373825 PCK1P35558 622 aa17.55■□□□□ 0.4
SRPK1-204ENST00000373825 EPS15P42566 896 aa17.55■□□□□ 0.4
SRPK1-204ENST00000373825 CAPS2Q9BXY5 557 aa17.55■□□□□ 0.4
SRPK1-204ENST00000373825 PPANQ9NQ55 473 aaKnown RBP17.55■□□□□ 0.4
SRPK1-204ENST00000373825 ZNF521Q96K83 1311 aa17.55■□□□□ 0.4
SRPK1-204ENST00000373825 MYL5Q02045 173 aa17.55■□□□□ 0.4
SRPK1-204ENST00000373825 NEK1Q96PY6 1258 aa17.55■□□□□ 0.4
SRPK1-204ENST00000373825 KIF2CQ99661 725 aa17.55■□□□□ 0.4
SRPK1-204ENST00000373825 PPFIA4O75335 1185 aa17.54■□□□□ 0.4
SRPK1-204ENST00000373825 FBXW10Q5XX13 1052 aa17.54■□□□□ 0.4
SRPK1-204ENST00000373825 CC2D1AQ6P1N0 951 aaPredicted RBP17.54■□□□□ 0.4
SRPK1-204ENST00000373825 TDRD7Q8NHU6 1098 aaKnown RBP17.54■□□□□ 0.4
SRPK1-204ENST00000373825 SEC62Q99442 399 aaKnown RBP17.54■□□□□ 0.4
SRPK1-204ENST00000373825 YY1AP1Q9H869 796 aa17.54■□□□□ 0.4
SRPK1-204ENST00000373825 ZMYM3Q14202 1370 aa17.54■□□□□ 0.4
SRPK1-204ENST00000373825 KIF1CO43896 1103 aaKnown RBP17.54■□□□□ 0.4
SRPK1-204ENST00000373825 SLFNL1Q499Z3 407 aa17.54■□□□□ 0.4
SRPK1-204ENST00000373825 NAPGQ99747 312 aaPredicted RBP17.54■□□□□ 0.4
SRPK1-204ENST00000373825 POLKQ9UBT6 870 aa17.54■□□□□ 0.4
SRPK1-204ENST00000373825 FBXO3Q9UK99 471 aa17.54■□□□□ 0.4
SRPK1-204ENST00000373825 RALGAPBQ86X10 1494 aa17.54■□□□□ 0.4
SRPK1-204ENST00000373825 E7EVH7 732 aa17.54■□□□□ 0.4
SRPK1-204ENST00000373825 ZMYND10O75800 440 aa17.54■□□□□ 0.4
SRPK1-204ENST00000373825 UBAC1Q9BSL1 405 aa17.54■□□□□ 0.4
SRPK1-204ENST00000373825 PPP2R2CQ9Y2T4 447 aa17.54■□□□□ 0.4
SRPK1-204ENST00000373825 SATB1Q01826 763 aa17.54■□□□□ 0.4
SRPK1-204ENST00000373825 CCDC6Q16204 474 aa17.54■□□□□ 0.4
SRPK1-204ENST00000373825 ERICH2A1L162 156 aa17.53■□□□□ 0.4
SRPK1-204ENST00000373825 USO1O60763 962 aaKnown RBP17.53■□□□□ 0.4
SRPK1-204ENST00000373825 C11orf57Q6ZUT1 292 aaPredicted RBP17.53■□□□□ 0.4
SRPK1-204ENST00000373825 CCDC141Q6ZP82 1450 aa17.53■□□□□ 0.4
SRPK1-204ENST00000373825 RBM6P78332 1123 aaKnown RBP17.53■□□□□ 0.4
SRPK1-204ENST00000373825 CLEC17AQ6ZS10 378 aa17.53■□□□□ 0.4
SRPK1-204ENST00000373825 CARD14Q9BXL6 1004 aa17.53■□□□□ 0.4
SRPK1-204ENST00000373825 CABP1Q9NZU7 370 aa17.53■□□□□ 0.4
SRPK1-204ENST00000373825 EPRSP07814 1512 aaKnown RBP17.53■□□□□ 0.4
SRPK1-204ENST00000373825 PPP1R42Q7Z4L9 355 aa17.53■□□□□ 0.4
SRPK1-204ENST00000373825 RIC3Q7Z5B4 369 aa17.53■□□□□ 0.4
SRPK1-204ENST00000373825 BICRAQ9NZM4 1560 aa17.53■□□□□ 0.4
SRPK1-204ENST00000373825 APOBRQ0VD83 1088 aa17.52■□□□□ 0.4
SRPK1-204ENST00000373825 IFT88Q13099 833 aa17.52■□□□□ 0.4
SRPK1-204ENST00000373825 CFAP43Q8NDM7 1665 aa17.52■□□□□ 0.4
SRPK1-204ENST00000373825 SPTLC2O15270 562 aa17.52■□□□□ 0.4
SRPK1-204ENST00000373825 CALR3Q96L12 384 aaKnown RBP17.52■□□□□ 0.4
SRPK1-204ENST00000373825 CCDC151A5D8V7 595 aa17.52■□□□□ 0.39
SRPK1-204ENST00000373825 KCTD16Q68DU8 428 aa17.52■□□□□ 0.39
SRPK1-204ENST00000373825 PSMB7Q99436 277 aa17.52■□□□□ 0.39
SRPK1-204ENST00000373825 MTMR7Q9Y216 660 aa17.52■□□□□ 0.39
SRPK1-204ENST00000373825 FAM169AQ9Y6X4 670 aa17.52■□□□□ 0.39
SRPK1-204ENST00000373825 PDS5BQ9NTI5 1447 aa17.52■□□□□ 0.39
SRPK1-204ENST00000373825 PSDA5PKW4 1024 aaPredicted RBP17.52■□□□□ 0.39
SRPK1-204ENST00000373825 SMIM23A6NLE4 172 aa17.52■□□□□ 0.39
SRPK1-204ENST00000373825 TUBB4BP68371 445 aa17.52■□□□□ 0.39
SRPK1-204ENST00000373825 TRIM68Q6AZZ1 485 aa17.52■□□□□ 0.39
SRPK1-204ENST00000373825 RHPN1Q8TCX5 695 aa17.52■□□□□ 0.39
SRPK1-204ENST00000373825 LCMT1Q9UIC8 334 aa17.52■□□□□ 0.39
SRPK1-204ENST00000373825 MRFAP1Q9Y605 127 aa17.52■□□□□ 0.39
SRPK1-204ENST00000373825 AFMP43652 599 aa17.51■□□□□ 0.39
SRPK1-204ENST00000373825 VPS53Q5VIR6 699 aa17.51■□□□□ 0.39
SRPK1-204ENST00000373825 ECHDC1Q9NTX5 307 aa17.51■□□□□ 0.39
SRPK1-204ENST00000373825 TLDC2A0PJX2 215 aa17.51■□□□□ 0.39
SRPK1-204ENST00000373825 VAV2P52735 878 aa17.51■□□□□ 0.39
SRPK1-204ENST00000373825 PPP1R7Q15435 360 aa17.51■□□□□ 0.39
SRPK1-204ENST00000373825 CCDC96Q2M329 555 aa17.51■□□□□ 0.39
SRPK1-204ENST00000373825 Q6ZUG5 572 aa17.51■□□□□ 0.39
SRPK1-204ENST00000373825 ANKS4BQ8N8V4 417 aa17.51■□□□□ 0.39
SRPK1-204ENST00000373825 ANKRD62A6NC57 917 aa17.51■□□□□ 0.39
SRPK1-204ENST00000373825 UBE4AQ14139 1066 aa17.51■□□□□ 0.39
SRPK1-204ENST00000373825 MED4Q9NPJ6 270 aa17.51■□□□□ 0.39
SRPK1-204ENST00000373825 PRG4Q92954 1404 aaPredicted RBP17.51■□□□□ 0.39
SRPK1-204ENST00000373825 AKR1B15C9JRZ8 316 aaPredicted RBP17.5■□□□□ 0.39
SRPK1-204ENST00000373825 TDRD12Q587J7 1177 aaKnown RBP17.5■□□□□ 0.39
SRPK1-204ENST00000373825 NGDNQ8NEJ9 315 aaKnown RBP17.5■□□□□ 0.39
SRPK1-204ENST00000373825 DHX58Q96C10 678 aa17.5■□□□□ 0.39
SRPK1-204ENST00000373825 LUC7LQ9NQ29 371 aaKnown RBP17.5■□□□□ 0.39
SRPK1-204ENST00000373825 CLTAP09496 248 aa17.5■□□□□ 0.39
SRPK1-204ENST00000373825 SNCBQ16143 134 aa17.5■□□□□ 0.39
SRPK1-204ENST00000373825 MYO1BO43795 1136 aa17.5■□□□□ 0.39
SRPK1-204ENST00000373825 SMARCC2Q8TAQ2 1214 aa17.5■□□□□ 0.39
SRPK1-204ENST00000373825 NAA15Q9BXJ9 866 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms