RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 KLF15Q9UIH9 416 aa7.5□□□□□ -1.21
ECHDC1-204ENST00000368292 NSFL1CQ9UNZ2 370 aaKnown RBP7.5□□□□□ -1.21
ECHDC1-204ENST00000368292 TOM1O60784 492 aa7.49□□□□□ -1.21
ECHDC1-204ENST00000368292 IDH3AP50213 366 aa7.49□□□□□ -1.21
ECHDC1-204ENST00000368292 SLC30A3Q99726 388 aa7.49□□□□□ -1.21
ECHDC1-204ENST00000368292 GNEQ9Y223 722 aaKnown RBP7.49□□□□□ -1.21
ECHDC1-204ENST00000368292 ATP10BO94823 1461 aa7.49□□□□□ -1.21
ECHDC1-204ENST00000368292 TCOF1Q13428 1488 aaKnown RBP7.49□□□□□ -1.21
ECHDC1-204ENST00000368292 MAGI2Q86UL8 1455 aa7.49□□□□□ -1.21
ECHDC1-204ENST00000368292 CELA2BP08218 269 aaPredicted RBP7.48□□□□□ -1.21
ECHDC1-204ENST00000368292 BRD2P25440 801 aaKnown RBP7.48□□□□□ -1.21
ECHDC1-204ENST00000368292 C1orf229Q6ZS94 237 aaPredicted RBP7.48□□□□□ -1.21
ECHDC1-204ENST00000368292 TREML1Q86YW5 311 aa7.48□□□□□ -1.21
ECHDC1-204ENST00000368292 KCNH4Q9UQ05 1017 aa7.48□□□□□ -1.21
ECHDC1-204ENST00000368292 CARMIL1Q5VZK9 1371 aa7.47□□□□□ -1.21
ECHDC1-204ENST00000368292 C9orf84Q5VXU9 1444 aa7.47□□□□□ -1.21
ECHDC1-204ENST00000368292 TRAPPC8Q9Y2L5 1435 aa7.47□□□□□ -1.21
ECHDC1-204ENST00000368292 ZBTB39O15060 712 aa7.47□□□□□ -1.21
ECHDC1-204ENST00000368292 IGSF3O75054 1194 aa7.47□□□□□ -1.21
ECHDC1-204ENST00000368292 ARHGEF15O94989 841 aa7.47□□□□□ -1.21
ECHDC1-204ENST00000368292 B4GALNT3Q6L9W6 998 aa7.47□□□□□ -1.21
ECHDC1-204ENST00000368292 TXNDC2Q86VQ3 553 aa7.47□□□□□ -1.21
ECHDC1-204ENST00000368292 GTF3C2Q8WUA4 911 aaPredicted RBP7.47□□□□□ -1.21
ECHDC1-204ENST00000368292 OXCT2Q9BYC2 517 aaPredicted RBP7.47□□□□□ -1.21
ECHDC1-204ENST00000368292 MTMR7Q9Y216 660 aa7.47□□□□□ -1.21
ECHDC1-204ENST00000368292 DNMT3AQ9Y6K1 912 aaPredicted RBP7.47□□□□□ -1.21
ECHDC1-204ENST00000368292 ARAFP10398 606 aa7.46□□□□□ -1.22
ECHDC1-204ENST00000368292 SPEM2Q0P670 501 aa7.46□□□□□ -1.22
ECHDC1-204ENST00000368292 ZNF468Q5VIY5 522 aaPredicted RBP7.46□□□□□ -1.22
ECHDC1-204ENST00000368292 HELQQ8TDG4 1101 aa7.46□□□□□ -1.22
ECHDC1-204ENST00000368292 STIM2Q9P246 746 aa7.46□□□□□ -1.22
ECHDC1-204ENST00000368292 GGA1Q9UJY5 639 aa7.46□□□□□ -1.22
ECHDC1-204ENST00000368292 CPS1P31327 1500 aa7.46□□□□□ -1.22
ECHDC1-204ENST00000368292 ZNF142P52746 1687 aaPredicted RBP7.45□□□□□ -1.22
ECHDC1-204ENST00000368292 ATP10AO60312 1499 aa7.45□□□□□ -1.22
ECHDC1-204ENST00000368292 PLA2R1Q13018 1463 aa7.45□□□□□ -1.22
ECHDC1-204ENST00000368292 RAPGEF2Q9Y4G8 1499 aa7.45□□□□□ -1.22
ECHDC1-204ENST00000368292 BCRP11274 1271 aa7.45□□□□□ -1.22
ECHDC1-204ENST00000368292 ARSDP51689 593 aa7.45□□□□□ -1.22
ECHDC1-204ENST00000368292 GSX2Q9BZM3 304 aa7.45□□□□□ -1.22
ECHDC1-204ENST00000368292 AVENQ9NQS1 362 aaPredicted RBP7.45□□□□□ -1.22
ECHDC1-204ENST00000368292 USP20Q9Y2K6 914 aa7.45□□□□□ -1.22
ECHDC1-204ENST00000368292 NEURL1BA8MQ27 555 aa7.44□□□□□ -1.22
ECHDC1-204ENST00000368292 OIP5O43482 229 aa7.44□□□□□ -1.22
ECHDC1-204ENST00000368292 PCBP4P57723 403 aaKnown RBP7.44□□□□□ -1.22
ECHDC1-204ENST00000368292 MTMR3Q13615 1198 aa7.44□□□□□ -1.22
ECHDC1-204ENST00000368292 SND1Q7KZF4 910 aaKnown RBP eCLIP7.44□□□□□ -1.22
ECHDC1-204ENST00000368292 RAB44Q7Z6P3 723 aaPredicted RBP7.44□□□□□ -1.22
ECHDC1-204ENST00000368292 FCHSD1Q86WN1 690 aa7.44□□□□□ -1.22
ECHDC1-204ENST00000368292 SVOPQ8N4V2 548 aa7.44□□□□□ -1.22
ECHDC1-204ENST00000368292 PUS7Q96PZ0 661 aaKnown RBP7.44□□□□□ -1.22
ECHDC1-204ENST00000368292 MDFIQ99750 246 aa7.44□□□□□ -1.22
ECHDC1-204ENST00000368292 LRRC4BQ9NT99 713 aa7.44□□□□□ -1.22
ECHDC1-204ENST00000368292 GDF2Q9UK05 429 aaPredicted RBP7.44□□□□□ -1.22
ECHDC1-204ENST00000368292 PRR12Q9ULL5 1215 aa7.44□□□□□ -1.22
ECHDC1-204ENST00000368292 RTCBQ9Y3I0 505 aaKnown RBP7.44□□□□□ -1.22
ECHDC1-204ENST00000368292 CFAP74Q9C0B2 1584 aa7.44□□□□□ -1.22
ECHDC1-204ENST00000368292 SUPT6HQ7KZ85 1726 aaKnown RBP7.44□□□□□ -1.22
ECHDC1-204ENST00000368292 PTPRKQ15262 1439 aa7.44□□□□□ -1.22
ECHDC1-204ENST00000368292 KIF27Q86VH2 1401 aa7.44□□□□□ -1.22
ECHDC1-204ENST00000368292 ARID4AP29374 1257 aaPredicted RBP7.43□□□□□ -1.22
ECHDC1-204ENST00000368292 SLCO4C1Q6ZQN7 724 aa7.43□□□□□ -1.22
ECHDC1-204ENST00000368292 SYT9Q86SS6 491 aa7.43□□□□□ -1.22
ECHDC1-204ENST00000368292 GOLGA6L1Q8N7Z2 621 aa7.43□□□□□ -1.22
ECHDC1-204ENST00000368292 STK17AQ9UEE5 414 aa7.43□□□□□ -1.22
ECHDC1-204ENST00000368292 SHANK2Q9UPX8 1470 aa7.43□□□□□ -1.22
ECHDC1-204ENST00000368292 VWDEQ8N2E2 1590 aa7.42□□□□□ -1.22
ECHDC1-204ENST00000368292 NEURL4Q96JN8 1562 aa7.42□□□□□ -1.22
ECHDC1-204ENST00000368292 MYO3AQ8NEV4 1616 aa7.42□□□□□ -1.22
ECHDC1-204ENST00000368292 SHISA8B8ZZ34 492 aa7.42□□□□□ -1.22
ECHDC1-204ENST00000368292 EPXP11678 715 aa7.42□□□□□ -1.22
ECHDC1-204ENST00000368292 EPB42P16452 691 aa7.42□□□□□ -1.22
ECHDC1-204ENST00000368292 NPR3P17342 541 aa7.42□□□□□ -1.22
ECHDC1-204ENST00000368292 ADH6P28332 368 aa7.42□□□□□ -1.22
ECHDC1-204ENST00000368292 ZAP70P43403 619 aa7.42□□□□□ -1.22
ECHDC1-204ENST00000368292 RGL4Q8IZJ4 473 aa7.42□□□□□ -1.22
ECHDC1-204ENST00000368292 GALNT6Q8NCL4 622 aa7.42□□□□□ -1.22
ECHDC1-204ENST00000368292 KCNMB2Q9Y691 235 aa7.42□□□□□ -1.22
ECHDC1-204ENST00000368292 SETBP1Q9Y6X0 1596 aa7.42□□□□□ -1.22
ECHDC1-204ENST00000368292 STRCP1A6NGW2 1772 aa7.41□□□□□ -1.22
ECHDC1-204ENST00000368292 SIN3BO75182 1162 aa7.41□□□□□ -1.22
ECHDC1-204ENST00000368292 EGFRP00533 1210 aa7.41□□□□□ -1.22
ECHDC1-204ENST00000368292 SERPINB4P48594 390 aa7.41□□□□□ -1.22
ECHDC1-204ENST00000368292 CCINQ13939 588 aa7.41□□□□□ -1.22
ECHDC1-204ENST00000368292 ECM1Q16610 540 aa7.41□□□□□ -1.22
ECHDC1-204ENST00000368292 ATCAYQ86WG3 371 aa7.41□□□□□ -1.22
ECHDC1-204ENST00000368292 ABTB2Q8N961 1025 aa7.41□□□□□ -1.22
ECHDC1-204ENST00000368292 CCER1Q8TC90 406 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-204ENST00000368292 EDARADDQ8WWZ3 215 aa7.41□□□□□ -1.22
ECHDC1-204ENST00000368292 FOXD4L4Q8WXT5 416 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-204ENST00000368292 C11orf16Q9NQ32 467 aa7.41□□□□□ -1.22
ECHDC1-204ENST00000368292 ANO2Q9NQ90 1003 aa7.41□□□□□ -1.22
ECHDC1-204ENST00000368292 ADAMTS8Q9UP79 889 aa7.41□□□□□ -1.22
ECHDC1-204ENST00000368292 CEP170BQ9Y4F5 1589 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-204ENST00000368292 MPSTP25325 297 aa7.4□□□□□ -1.22
ECHDC1-204ENST00000368292 FKBP4Q02790 459 aaKnown RBP eCLIP7.4□□□□□ -1.22
ECHDC1-204ENST00000368292 ZNF211Q13398 564 aaPredicted RBP7.4□□□□□ -1.22
ECHDC1-204ENST00000368292 CMTR1Q8N1G2 835 aaKnown RBP7.4□□□□□ -1.22
ECHDC1-204ENST00000368292 BHMTQ93088 406 aa7.4□□□□□ -1.22
ECHDC1-204ENST00000368292 ZFATQ9P243 1243 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms