RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 TRIM33Q9UPN9 1127 aa9.92□□□□□ -0.82
RNU4-40P-201ENST00000364351 UBAP1LF5GYI3 381 aa9.91□□□□□ -0.82
RNU4-40P-201ENST00000364351 FAM26DQ5JW98 314 aa9.91□□□□□ -0.82
RNU4-40P-201ENST00000364351 DZIP1LQ8IYY4 767 aaKnown RBP9.91□□□□□ -0.82
RNU4-40P-201ENST00000364351 STK32AQ8WU08 396 aa9.91□□□□□ -0.82
RNU4-40P-201ENST00000364351 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.9□□□□□ -0.82
RNU4-40P-201ENST00000364351 F8W735 103 aaPredicted RBP9.9□□□□□ -0.82
RNU4-40P-201ENST00000364351 HOXD8P13378 290 aaPredicted RBP9.9□□□□□ -0.82
RNU4-40P-201ENST00000364351 FAM69CQ0P6D2 419 aa9.9□□□□□ -0.82
RNU4-40P-201ENST00000364351 NAA30Q147X3 362 aaPredicted RBP9.9□□□□□ -0.82
RNU4-40P-201ENST00000364351 SETDB1Q15047 1291 aa9.9□□□□□ -0.82
RNU4-40P-201ENST00000364351 CAPN12Q6ZSI9 719 aa9.9□□□□□ -0.82
RNU4-40P-201ENST00000364351 TMEM130Q8N3G9 435 aa9.9□□□□□ -0.82
RNU4-40P-201ENST00000364351 PIK3R5Q8WYR1 880 aa9.9□□□□□ -0.82
RNU4-40P-201ENST00000364351 RNF112Q9ULX5 631 aa9.9□□□□□ -0.82
RNU4-40P-201ENST00000364351 ELOAQ14241 798 aaKnown RBP9.89□□□□□ -0.83
RNU4-40P-201ENST00000364351 SRA1Q9HD15 236 aaKnown RBP9.89□□□□□ -0.83
RNU4-40P-201ENST00000364351 MAP4K3Q8IVH8 894 aa9.88□□□□□ -0.83
RNU4-40P-201ENST00000364351 AGGF1Q8N302 714 aaeCLIP9.88□□□□□ -0.83
RNU4-40P-201ENST00000364351 DCAF11Q8TEB1 546 aa9.88□□□□□ -0.83
RNU4-40P-201ENST00000364351 FAM13BQ9NYF5 915 aa9.88□□□□□ -0.83
RNU4-40P-201ENST00000364351 PPME1Q9Y570 386 aa9.88□□□□□ -0.83
RNU4-40P-201ENST00000364351 KRTAP9-6A0A140TA67 174 aa9.87□□□□□ -0.83
RNU4-40P-201ENST00000364351 TNFRSF10BO14763 440 aa9.87□□□□□ -0.83
RNU4-40P-201ENST00000364351 COL13A1Q5TAT6 717 aaPredicted RBP9.87□□□□□ -0.83
RNU4-40P-201ENST00000364351 OR13H1Q8NG92 308 aa9.87□□□□□ -0.83
RNU4-40P-201ENST00000364351 COL26A1Q96A83 441 aa9.87□□□□□ -0.83
RNU4-40P-201ENST00000364351 SPACA7Q96KW9 195 aa9.87□□□□□ -0.83
RNU4-40P-201ENST00000364351 MUC3BQ9H195 1237 aa9.87□□□□□ -0.83
RNU4-40P-201ENST00000364351 CXXC1Q9P0U4 656 aaPredicted RBP9.87□□□□□ -0.83
RNU4-40P-201ENST00000364351 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.86□□□□□ -0.83
RNU4-40P-201ENST00000364351 LINC01387J3KSC0 135 aa9.86□□□□□ -0.83
RNU4-40P-201ENST00000364351 GLB1P16278 677 aa9.86□□□□□ -0.83
RNU4-40P-201ENST00000364351 FSTP19883 344 aa9.86□□□□□ -0.83
RNU4-40P-201ENST00000364351 HYAL2Q12891 473 aa9.86□□□□□ -0.83
RNU4-40P-201ENST00000364351 TTC39BQ5VTQ0 682 aaPredicted RBP9.86□□□□□ -0.83
RNU4-40P-201ENST00000364351 CACTIN-AS1Q8N1I8 211 aa9.86□□□□□ -0.83
RNU4-40P-201ENST00000364351 LACRTQ9GZZ8 138 aa9.86□□□□□ -0.83
RNU4-40P-201ENST00000364351 SCNN1AP37088 669 aa9.85□□□□□ -0.83
RNU4-40P-201ENST00000364351 ZAP70P43403 619 aa9.85□□□□□ -0.83
RNU4-40P-201ENST00000364351 ATP11AP98196 1134 aa9.85□□□□□ -0.83
RNU4-40P-201ENST00000364351 CEP135Q66GS9 1140 aa9.85□□□□□ -0.83
RNU4-40P-201ENST00000364351 GPR152Q8TDT2 470 aa9.85□□□□□ -0.83
RNU4-40P-201ENST00000364351 FNDC3AQ9Y2H6 1198 aaKnown RBP9.85□□□□□ -0.83
RNU4-40P-201ENST00000364351 PTCD1O75127 700 aaKnown RBP9.84□□□□□ -0.83
RNU4-40P-201ENST00000364351 CDC25BP30305 580 aa9.84□□□□□ -0.83
RNU4-40P-201ENST00000364351 TXNDC11Q6PKC3 985 aa9.84□□□□□ -0.83
RNU4-40P-201ENST00000364351 GALNT11Q8NCW6 608 aa9.84□□□□□ -0.83
RNU4-40P-201ENST00000364351 SMNDC1O75940 238 aaKnown RBP eCLIP9.83□□□□□ -0.84
RNU4-40P-201ENST00000364351 TMEM164Q5U3C3 297 aa9.83□□□□□ -0.84
RNU4-40P-201ENST00000364351 ZBTB39O15060 712 aa9.82□□□□□ -0.84
RNU4-40P-201ENST00000364351 CDC27P30260 824 aa9.82□□□□□ -0.84
RNU4-40P-201ENST00000364351 SRPK2P78362 688 aaKnown RBP9.82□□□□□ -0.84
RNU4-40P-201ENST00000364351 Q6ZS46 218 aa9.82□□□□□ -0.84
RNU4-40P-201ENST00000364351 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.82□□□□□ -0.84
RNU4-40P-201ENST00000364351 SLC51AQ86UW1 340 aa9.82□□□□□ -0.84
RNU4-40P-201ENST00000364351 RASSF4Q9H2L5 321 aa9.82□□□□□ -0.84
RNU4-40P-201ENST00000364351 PCMTD2Q9NV79 361 aa9.82□□□□□ -0.84
RNU4-40P-201ENST00000364351 STIM2Q9P246 746 aa9.82□□□□□ -0.84
RNU4-40P-201ENST00000364351 ATG7O95352 703 aa9.81□□□□□ -0.84
RNU4-40P-201ENST00000364351 SSTR4P31391 388 aa9.81□□□□□ -0.84
RNU4-40P-201ENST00000364351 CD68P34810 354 aaPredicted RBP9.81□□□□□ -0.84
RNU4-40P-201ENST00000364351 UBL7Q96S82 380 aaPredicted RBP9.81□□□□□ -0.84
RNU4-40P-201ENST00000364351 ABI2Q9NYB9 513 aaPredicted RBP9.81□□□□□ -0.84
RNU4-40P-201ENST00000364351 RAXQ9Y2V3 346 aa9.81□□□□□ -0.84
RNU4-40P-201ENST00000364351 WISP1O95388 367 aa9.8□□□□□ -0.84
RNU4-40P-201ENST00000364351 CYP2E1P05181 493 aaPredicted RBP9.8□□□□□ -0.84
RNU4-40P-201ENST00000364351 ACAD11Q709F0 780 aa9.8□□□□□ -0.84
RNU4-40P-201ENST00000364351 CARD10Q9BWT7 1032 aa9.8□□□□□ -0.84
RNU4-40P-201ENST00000364351 NCAPG2Q86XI2 1143 aa9.79□□□□□ -0.84
RNU4-40P-201ENST00000364351 ABTB2Q8N961 1025 aa9.79□□□□□ -0.84
RNU4-40P-201ENST00000364351 KCNK4Q9NYG8 393 aa9.79□□□□□ -0.84
RNU4-40P-201ENST00000364351 STOML1Q9UBI4 398 aa9.79□□□□□ -0.84
RNU4-40P-201ENST00000364351 ADAMTSL4Q6UY14 1074 aa9.78□□□□□ -0.84
RNU4-40P-201ENST00000364351 CLP1Q92989 425 aaKnown RBP9.78□□□□□ -0.84
RNU4-40P-201ENST00000364351 SH2B1Q9NRF2 756 aaPredicted RBP9.78□□□□□ -0.84
RNU4-40P-201ENST00000364351 KIF4AO95239 1232 aa9.77□□□□□ -0.85
RNU4-40P-201ENST00000364351 FAM117BQ6P1L5 589 aa9.77□□□□□ -0.85
RNU4-40P-201ENST00000364351 PBX4Q9BYU1 374 aa9.77□□□□□ -0.85
RNU4-40P-201ENST00000364351 FSCN2O14926 492 aa9.76□□□□□ -0.85
RNU4-40P-201ENST00000364351 DHX15O43143 795 aaKnown RBP9.76□□□□□ -0.85
RNU4-40P-201ENST00000364351 IGLV1-40P01703 118 aa9.76□□□□□ -0.85
RNU4-40P-201ENST00000364351 NUDT16Q96DE0 195 aaKnown RBP9.76□□□□□ -0.85
RNU4-40P-201ENST00000364351 CEP41Q9BYV8 373 aa9.76□□□□□ -0.85
RNU4-40P-201ENST00000364351 ELP3Q9H9T3 547 aa9.76□□□□□ -0.85
RNU4-40P-201ENST00000364351 FAM177BA6PVY3 158 aa9.75□□□□□ -0.85
RNU4-40P-201ENST00000364351 DDX3YO15523 660 aaKnown RBP9.75□□□□□ -0.85
RNU4-40P-201ENST00000364351 EPHA1P21709 976 aa9.75□□□□□ -0.85
RNU4-40P-201ENST00000364351 DUOXA2Q1HG44 320 aa9.75□□□□□ -0.85
RNU4-40P-201ENST00000364351 ARMC10Q8N2F6 343 aa9.75□□□□□ -0.85
RNU4-40P-201ENST00000364351 CEP120Q8N960 986 aa9.75□□□□□ -0.85
RNU4-40P-201ENST00000364351 KLHL23Q8NBE8 558 aa9.75□□□□□ -0.85
RNU4-40P-201ENST00000364351 POP1Q99575 1024 aaKnown RBP9.75□□□□□ -0.85
RNU4-40P-201ENST00000364351 TMEM63CQ9P1W3 806 aa9.75□□□□□ -0.85
RNU4-40P-201ENST00000364351 SEPT3Q9UH03 358 aa9.75□□□□□ -0.85
RNU4-40P-201ENST00000364351 GSC2O15499 205 aa9.74□□□□□ -0.85
RNU4-40P-201ENST00000364351 PTPRAP18433 802 aa9.74□□□□□ -0.85
RNU4-40P-201ENST00000364351 ZNF438Q7Z4V0 828 aa9.74□□□□□ -0.85
RNU4-40P-201ENST00000364351 ATCAYQ86WG3 371 aa9.74□□□□□ -0.85
RNU4-40P-201ENST00000364351 SLAIN2Q9P270 581 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms