RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 SMG9Q9H0W8 520 aaKnown RBP6.14□□□□□ -1.43
RNU4-1-201ENST00000363925 CNTN3Q9P232 1028 aa6.14□□□□□ -1.43
RNU4-1-201ENST00000363925 FAM177BA6PVY3 158 aa6.13□□□□□ -1.43
RNU4-1-201ENST00000363925 ZBTB42B2RXF5 422 aa6.13□□□□□ -1.43
RNU4-1-201ENST00000363925 TNFRSF21O75509 655 aa6.13□□□□□ -1.43
RNU4-1-201ENST00000363925 POLR3DP05423 398 aaPredicted RBP6.13□□□□□ -1.43
RNU4-1-201ENST00000363925 LORP23490 312 aaPredicted RBP6.13□□□□□ -1.43
RNU4-1-201ENST00000363925 ECM1Q16610 540 aa6.13□□□□□ -1.43
RNU4-1-201ENST00000363925 GDF6Q6KF10 455 aaPredicted RBP6.13□□□□□ -1.43
RNU4-1-201ENST00000363925 KANK3Q6NY19 840 aa6.13□□□□□ -1.43
RNU4-1-201ENST00000363925 SND1Q7KZF4 910 aaKnown RBP eCLIP6.13□□□□□ -1.43
RNU4-1-201ENST00000363925 SCARF2Q96GP6 870 aaPredicted RBP6.13□□□□□ -1.43
RNU4-1-201ENST00000363925 MKL2Q9ULH7 1088 aa6.13□□□□□ -1.43
RNU4-1-201ENST00000363925 EREGO14944 169 aa6.12□□□□□ -1.43
RNU4-1-201ENST00000363925 LILRB5O75023 590 aa6.12□□□□□ -1.43
RNU4-1-201ENST00000363925 MAPK8P45983 427 aa6.12□□□□□ -1.43
RNU4-1-201ENST00000363925 PERM1Q5SV97 790 aa6.12□□□□□ -1.43
RNU4-1-201ENST00000363925 COL13A1Q5TAT6 717 aaPredicted RBP6.12□□□□□ -1.43
RNU4-1-201ENST00000363925 CEP135Q66GS9 1140 aa6.12□□□□□ -1.43
RNU4-1-201ENST00000363925 TRPM4Q8TD43 1214 aa6.12□□□□□ -1.43
RNU4-1-201ENST00000363925 CNTNAP5Q8WYK1 1306 aa6.12□□□□□ -1.43
RNU4-1-201ENST00000363925 PMEPA1Q969W9 287 aa6.12□□□□□ -1.43
RNU4-1-201ENST00000363925 PLD4Q96BZ4 506 aa6.12□□□□□ -1.43
RNU4-1-201ENST00000363925 DMRTB1Q96MA1 342 aa6.12□□□□□ -1.43
RNU4-1-201ENST00000363925 CITED4Q96RK1 184 aa6.12□□□□□ -1.43
RNU4-1-201ENST00000363925 LRRC4BQ9NT99 713 aa6.12□□□□□ -1.43
RNU4-1-201ENST00000363925 NAGPAQ9UK23 515 aa6.12□□□□□ -1.43
RNU4-1-201ENST00000363925 AMOTL2Q9Y2J4 779 aa6.12□□□□□ -1.43
RNU4-1-201ENST00000363925 PIK3R2O00459 728 aa6.11□□□□□ -1.43
RNU4-1-201ENST00000363925 SOX18P35713 384 aa6.11□□□□□ -1.43
RNU4-1-201ENST00000363925 SNRPNP63162 240 aaKnown RBP6.11□□□□□ -1.43
RNU4-1-201ENST00000363925 ATP11AP98196 1134 aa6.11□□□□□ -1.43
RNU4-1-201ENST00000363925 ORC1Q13415 861 aa6.11□□□□□ -1.43
RNU4-1-201ENST00000363925 CCDC27Q2M243 656 aa6.11□□□□□ -1.43
RNU4-1-201ENST00000363925 TRAPPC3LQ5T215 181 aa6.11□□□□□ -1.43
RNU4-1-201ENST00000363925 XKR5Q6UX68 686 aa6.11□□□□□ -1.43
RNU4-1-201ENST00000363925 TMC7Q7Z402 723 aa6.11□□□□□ -1.43
RNU4-1-201ENST00000363925 BEND7Q8N7W2 519 aaPredicted RBP6.11□□□□□ -1.43
RNU4-1-201ENST00000363925 RBCK1Q9BYM8 510 aa6.11□□□□□ -1.43
RNU4-1-201ENST00000363925 STARD13Q9Y3M8 1113 aa6.11□□□□□ -1.43
RNU4-1-201ENST00000363925 GPR182O15218 404 aa6.1□□□□□ -1.43
RNU4-1-201ENST00000363925 SMNDC1O75940 238 aaKnown RBP eCLIP6.1□□□□□ -1.434e-50■■■■■ 31
RNU4-1-201ENST00000363925 CDC25BP30305 580 aa6.1□□□□□ -1.43
RNU4-1-201ENST00000363925 IRS1P35568 1242 aa6.1□□□□□ -1.43
RNU4-1-201ENST00000363925 PLCB3Q01970 1234 aa6.1□□□□□ -1.43
RNU4-1-201ENST00000363925 TMCO4Q5TGY1 634 aa6.1□□□□□ -1.43
RNU4-1-201ENST00000363925 LPIN3Q9BQK8 851 aa6.1□□□□□ -1.43
RNU4-1-201ENST00000363925 LACRTQ9GZZ8 138 aa6.1□□□□□ -1.43
RNU4-1-201ENST00000363925 ZFYVE28Q9HCC9 887 aa6.1□□□□□ -1.43
RNU4-1-201ENST00000363925 RNF225M0QZC1 329 aaPredicted RBP6.09□□□□□ -1.43
RNU4-1-201ENST00000363925 CPNE3O75131 537 aaKnown RBP6.09□□□□□ -1.43
RNU4-1-201ENST00000363925 GADD45BO75293 160 aaPredicted RBP6.09□□□□□ -1.43
RNU4-1-201ENST00000363925 TRPA1O75762 1119 aa6.09□□□□□ -1.43
RNU4-1-201ENST00000363925 EDN3P14138 238 aa6.09□□□□□ -1.43
RNU4-1-201ENST00000363925 ACPPP15309 386 aa6.09□□□□□ -1.43
RNU4-1-201ENST00000363925 FAM129BQ96TA1 746 aa6.09□□□□□ -1.43
RNU4-1-201ENST00000363925 RASSF4Q9H2L5 321 aa6.09□□□□□ -1.43
RNU4-1-201ENST00000363925 CHRDQ9H2X0 955 aa6.09□□□□□ -1.43
RNU4-1-201ENST00000363925 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.09□□□□□ -1.43
RNU4-1-201ENST00000363925 GNB5O14775 395 aa6.08□□□□□ -1.44
RNU4-1-201ENST00000363925 DGKGP49619 791 aa6.08□□□□□ -1.44
RNU4-1-201ENST00000363925 USPL1Q5W0Q7 1092 aa6.08□□□□□ -1.44
RNU4-1-201ENST00000363925 WFDC8Q8IUA0 241 aa6.08□□□□□ -1.44
RNU4-1-201ENST00000363925 DMRTC2Q8IXT2 367 aaPredicted RBP6.08□□□□□ -1.44
RNU4-1-201ENST00000363925 ASAP3Q8TDY4 903 aa6.08□□□□□ -1.44
RNU4-1-201ENST00000363925 OSMRQ99650 979 aa6.08□□□□□ -1.44
RNU4-1-201ENST00000363925 PLVAPQ9BX97 442 aa6.08□□□□□ -1.44
RNU4-1-201ENST00000363925 FRRS1LQ9P0K9 344 aa6.08□□□□□ -1.44
RNU4-1-201ENST00000363925 TRIM33Q9UPN9 1127 aa6.08□□□□□ -1.44
RNU4-1-201ENST00000363925 PNMA6FA0A0J9YX94 578 aa6.07□□□□□ -1.44
RNU4-1-201ENST00000363925 SPDYE3A6NKU9 549 aa6.07□□□□□ -1.44
RNU4-1-201ENST00000363925 EIF1AYO14602 144 aaKnown RBP6.07□□□□□ -1.44
RNU4-1-201ENST00000363925 ATP2B2Q01814 1243 aa6.07□□□□□ -1.44
RNU4-1-201ENST00000363925 TRIM26Q12899 539 aaPredicted RBP6.07□□□□□ -1.44
RNU4-1-201ENST00000363925 IL22RA1Q8N6P7 574 aa6.07□□□□□ -1.44
RNU4-1-201ENST00000363925 CSRNP1Q96S65 589 aa6.07□□□□□ -1.44
RNU4-1-201ENST00000363925 MDFIQ99750 246 aa6.07□□□□□ -1.44
RNU4-1-201ENST00000363925 NPHS2Q9NP85 383 aa6.07□□□□□ -1.44
RNU4-1-201ENST00000363925 LATS2Q9NRM7 1088 aa6.07□□□□□ -1.44
RNU4-1-201ENST00000363925 NOP53Q9NZM5 478 aaKnown RBP6.07□□□□□ -1.44
RNU4-1-201ENST00000363925 SALL4Q9UJQ4 1053 aa6.07□□□□□ -1.44
RNU4-1-201ENST00000363925 FAM229AH3BQW9 127 aa6.06□□□□□ -1.44
RNU4-1-201ENST00000363925 AFF1P51825 1210 aaKnown RBP6.06□□□□□ -1.44
RNU4-1-201ENST00000363925 TRIM28Q13263 835 aaKnown RBP6.06□□□□□ -1.44
RNU4-1-201ENST00000363925 PRRT3Q5FWE3 981 aa6.06□□□□□ -1.44
RNU4-1-201ENST00000363925 C20orf204Q6ZNR8 217 aa6.06□□□□□ -1.44
RNU4-1-201ENST00000363925 ASB16Q96NS5 453 aa6.06□□□□□ -1.44
RNU4-1-201ENST00000363925 PBX4Q9BYU1 374 aa6.06□□□□□ -1.44
RNU4-1-201ENST00000363925 EHD4Q9H223 541 aa6.06□□□□□ -1.44
RNU4-1-201ENST00000363925 SUV39H2Q9H5I1 410 aa6.06□□□□□ -1.44
RNU4-1-201ENST00000363925 NLRP2Q9NX02 1062 aa6.06□□□□□ -1.44
RNU4-1-201ENST00000363925 ANKRD33BA6NCL7 494 aa6.05□□□□□ -1.44
RNU4-1-201ENST00000363925 PDE2AO00408 941 aaPredicted RBP6.05□□□□□ -1.44
RNU4-1-201ENST00000363925 KIF4AO95239 1232 aa6.05□□□□□ -1.44
RNU4-1-201ENST00000363925 PTPRAP18433 802 aa6.05□□□□□ -1.44
RNU4-1-201ENST00000363925 CDC27P30260 824 aa6.05□□□□□ -1.44
RNU4-1-201ENST00000363925 CABP4P57796 275 aa6.05□□□□□ -1.44
RNU4-1-201ENST00000363925 RAC1P63000 192 aa6.05□□□□□ -1.44
RNU4-1-201ENST00000363925 MSL1Q68DK7 614 aa6.05□□□□□ -1.44
RNU4-1-201ENST00000363925 FAM117BQ6P1L5 589 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms