RNA–Protein interactions for RNA: ENST00000362773.1

RNU4-90P-201, Transcript of RNA, U4 small nuclear 90, pseudogene, humanhuman

BASIC

Gene RNU4-90P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-90P-201ENST00000362773 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.67□□□□□ -1.66
RNU4-90P-201ENST00000362773 TRIM33Q9UPN9 1127 aa4.67□□□□□ -1.66
RNU4-90P-201ENST00000362773 F8W735 103 aaPredicted RBP4.66□□□□□ -1.66
RNU4-90P-201ENST00000362773 ARID4AP29374 1257 aaPredicted RBP4.66□□□□□ -1.66
RNU4-90P-201ENST00000362773 SRPK2P78362 688 aaKnown RBP4.66□□□□□ -1.66
RNU4-90P-201ENST00000362773 ELOAQ14241 798 aaKnown RBP4.66□□□□□ -1.66
RNU4-90P-201ENST00000362773 COL13A1Q5TAT6 717 aaPredicted RBP4.66□□□□□ -1.66
RNU4-90P-201ENST00000362773 ADAMTSL4Q6UY14 1074 aa4.66□□□□□ -1.66
RNU4-90P-201ENST00000362773 Q6ZS46 218 aa4.66□□□□□ -1.66
RNU4-90P-201ENST00000362773 NBPF11Q86T75 865 aa4.66□□□□□ -1.66
RNU4-90P-201ENST00000362773 TMEM130Q8N3G9 435 aa4.66□□□□□ -1.66
RNU4-90P-201ENST00000362773 AKTIPQ9H8T0 292 aa4.66□□□□□ -1.66
RNU4-90P-201ENST00000362773 RNF112Q9ULX5 631 aa4.66□□□□□ -1.66
RNU4-90P-201ENST00000362773 TM4SF5O14894 197 aa4.65□□□□□ -1.67
RNU4-90P-201ENST00000362773 GHRHP01286 108 aa4.65□□□□□ -1.67
RNU4-90P-201ENST00000362773 BRD2P25440 801 aaKnown RBP4.65□□□□□ -1.67
RNU4-90P-201ENST00000362773 C16orf46Q6P387 395 aa4.65□□□□□ -1.67
RNU4-90P-201ENST00000362773 NLRP13Q86W25 1043 aa4.65□□□□□ -1.67
RNU4-90P-201ENST00000362773 KRTAP1-3Q8IUG1 177 aa4.65□□□□□ -1.67
RNU4-90P-201ENST00000362773 AGGF1Q8N302 714 aaeCLIP4.65□□□□□ -1.67
RNU4-90P-201ENST00000362773 OR13H1Q8NG92 308 aa4.65□□□□□ -1.67
RNU4-90P-201ENST00000362773 COL26A1Q96A83 441 aa4.65□□□□□ -1.67
RNU4-90P-201ENST00000362773 MRPL18Q9H0U6 180 aaKnown RBP4.65□□□□□ -1.67
RNU4-90P-201ENST00000362773 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.64□□□□□ -1.67
RNU4-90P-201ENST00000362773 GALNT11Q8NCW6 608 aa4.64□□□□□ -1.67
RNU4-90P-201ENST00000362773 MKNK1Q9BUB5 465 aa4.64□□□□□ -1.67
RNU4-90P-201ENST00000362773 SRA1Q9HD15 236 aaKnown RBP4.64□□□□□ -1.67
RNU4-90P-201ENST00000362773 CXXC1Q9P0U4 656 aaPredicted RBP4.64□□□□□ -1.67
RNU4-90P-201ENST00000362773 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.63□□□□□ -1.67
RNU4-90P-201ENST00000362773 ZBTB39O15060 712 aa4.63□□□□□ -1.67
RNU4-90P-201ENST00000362773 WISP1O95388 367 aa4.63□□□□□ -1.67
RNU4-90P-201ENST00000362773 FSTP19883 344 aa4.63□□□□□ -1.67
RNU4-90P-201ENST00000362773 ATP11AP98196 1134 aa4.63□□□□□ -1.67
RNU4-90P-201ENST00000362773 UBL7Q96S82 380 aaPredicted RBP4.63□□□□□ -1.67
RNU4-90P-201ENST00000362773 RBSNQ9H1K0 784 aa4.63□□□□□ -1.67
RNU4-90P-201ENST00000362773 SLAIN2Q9P270 581 aa4.63□□□□□ -1.67
RNU4-90P-201ENST00000362773 UBAP1LF5GYI3 381 aa4.62□□□□□ -1.67
RNU4-90P-201ENST00000362773 KIF4AO95239 1232 aa4.62□□□□□ -1.67
RNU4-90P-201ENST00000362773 ZAP70P43403 619 aa4.62□□□□□ -1.67
RNU4-90P-201ENST00000362773 NAA30Q147X3 362 aaPredicted RBP4.62□□□□□ -1.67
RNU4-90P-201ENST00000362773 TMEM164Q5U3C3 297 aa4.62□□□□□ -1.67
RNU4-90P-201ENST00000362773 MAP4K3Q8IVH8 894 aa4.62□□□□□ -1.67
RNU4-90P-201ENST00000362773 KCNK4Q9NYG8 393 aa4.62□□□□□ -1.67
RNU4-90P-201ENST00000362773 PPME1Q9Y570 386 aa4.62□□□□□ -1.67
RNU4-90P-201ENST00000362773 LINC01387J3KSC0 135 aa4.61□□□□□ -1.67
RNU4-90P-201ENST00000362773 ATG7O95352 703 aa4.61□□□□□ -1.67
RNU4-90P-201ENST00000362773 CYP2E1P05181 493 aaPredicted RBP4.61□□□□□ -1.67
RNU4-90P-201ENST00000362773 TXNDC11Q6PKC3 985 aa4.61□□□□□ -1.67
RNU4-90P-201ENST00000362773 CACTIN-AS1Q8N1I8 211 aa4.61□□□□□ -1.67
RNU4-90P-201ENST00000362773 ARMC10Q8N2F6 343 aa4.61□□□□□ -1.67
RNU4-90P-201ENST00000362773 GPR152Q8TDT2 470 aa4.61□□□□□ -1.67
RNU4-90P-201ENST00000362773 PIK3R5Q8WYR1 880 aa4.61□□□□□ -1.67
RNU4-90P-201ENST00000362773 LACRTQ9GZZ8 138 aa4.61□□□□□ -1.67
RNU4-90P-201ENST00000362773 RASSF4Q9H2L5 321 aa4.61□□□□□ -1.67
RNU4-90P-201ENST00000362773 GLB1P16278 677 aa4.6□□□□□ -1.67
RNU4-90P-201ENST00000362773 CD97P48960 835 aa4.6□□□□□ -1.67
RNU4-90P-201ENST00000362773 HYAL2Q12891 473 aa4.6□□□□□ -1.67
RNU4-90P-201ENST00000362773 LCE3BQ5TA77 95 aa4.6□□□□□ -1.67
RNU4-90P-201ENST00000362773 CEP135Q66GS9 1140 aa4.6□□□□□ -1.67
RNU4-90P-201ENST00000362773 SLC51AQ86UW1 340 aa4.6□□□□□ -1.67
RNU4-90P-201ENST00000362773 CEP120Q8N960 986 aa4.6□□□□□ -1.67
RNU4-90P-201ENST00000362773 CLP1Q92989 425 aaKnown RBP4.6□□□□□ -1.67
RNU4-90P-201ENST00000362773 MUC3BQ9H195 1237 aa4.6□□□□□ -1.67
RNU4-90P-201ENST00000362773 FAM13BQ9NYF5 915 aa4.6□□□□□ -1.67
RNU4-90P-201ENST00000362773 RAXQ9Y2V3 346 aa4.6□□□□□ -1.67
RNU4-90P-201ENST00000362773 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.6□□□□□ -1.67
RNU4-90P-201ENST00000362773 ADAM11O75078 769 aa4.59□□□□□ -1.67
RNU4-90P-201ENST00000362773 PTCD1O75127 700 aaKnown RBP4.59□□□□□ -1.67
RNU4-90P-201ENST00000362773 MED26O95402 600 aa4.59□□□□□ -1.67
RNU4-90P-201ENST00000362773 EPHA1P21709 976 aa4.59□□□□□ -1.67
RNU4-90P-201ENST00000362773 CDC27P30260 824 aa4.59□□□□□ -1.67
RNU4-90P-201ENST00000362773 CD68P34810 354 aaPredicted RBP4.59□□□□□ -1.67
RNU4-90P-201ENST00000362773 KIAA1211Q6ZU35 1233 aa4.59□□□□□ -1.67
RNU4-90P-201ENST00000362773 KRTAP19-1Q8IUB9 90 aa4.59□□□□□ -1.67
RNU4-90P-201ENST00000362773 DCAF11Q8TEB1 546 aa4.59□□□□□ -1.67
RNU4-90P-201ENST00000362773 FOXD4L4Q8WXT5 416 aaPredicted RBP4.59□□□□□ -1.67
RNU4-90P-201ENST00000362773 CARD10Q9BWT7 1032 aa4.59□□□□□ -1.67
RNU4-90P-201ENST00000362773 PBX4Q9BYU1 374 aa4.59□□□□□ -1.67
RNU4-90P-201ENST00000362773 PCMTD2Q9NV79 361 aa4.59□□□□□ -1.67
RNU4-90P-201ENST00000362773 ABI2Q9NYB9 513 aaPredicted RBP4.59□□□□□ -1.67
RNU4-90P-201ENST00000362773 STIM2Q9P246 746 aa4.59□□□□□ -1.67
RNU4-90P-201ENST00000362773 DDX3YO15523 660 aaKnown RBP4.58□□□□□ -1.68
RNU4-90P-201ENST00000362773 SMNDC1O75940 238 aaKnown RBP eCLIP4.58□□□□□ -1.68
RNU4-90P-201ENST00000362773 TGFB1P01137 390 aa4.58□□□□□ -1.68
RNU4-90P-201ENST00000362773 IGLV1-40P01703 118 aa4.58□□□□□ -1.68
RNU4-90P-201ENST00000362773 CDC25BP30305 580 aa4.58□□□□□ -1.68
RNU4-90P-201ENST00000362773 SSTR4P31391 388 aa4.58□□□□□ -1.68
RNU4-90P-201ENST00000362773 SCNN1AP37088 669 aa4.58□□□□□ -1.68
RNU4-90P-201ENST00000362773 TTC39BQ5VTQ0 682 aaPredicted RBP4.58□□□□□ -1.68
RNU4-90P-201ENST00000362773 ACAD11Q709F0 780 aa4.58□□□□□ -1.68
RNU4-90P-201ENST00000362773 SPACA7Q96KW9 195 aa4.58□□□□□ -1.68
RNU4-90P-201ENST00000362773 POP1Q99575 1024 aaKnown RBP4.58□□□□□ -1.68
RNU4-90P-201ENST00000362773 SH2B1Q9NRF2 756 aaPredicted RBP4.58□□□□□ -1.68
RNU4-90P-201ENST00000362773 TMEM63CQ9P1W3 806 aa4.58□□□□□ -1.68
RNU4-90P-201ENST00000362773 CNTN3Q9P232 1028 aa4.58□□□□□ -1.68
RNU4-90P-201ENST00000362773 SEPT3Q9UH03 358 aa4.58□□□□□ -1.68
RNU4-90P-201ENST00000362773 FNDC3AQ9Y2H6 1198 aaKnown RBP4.58□□□□□ -1.68
RNU4-90P-201ENST00000362773 KIAA1324LA8MWY0 1029 aaPredicted RBP4.57□□□□□ -1.68
RNU4-90P-201ENST00000362773 NFKBIEO00221 500 aa4.57□□□□□ -1.68
RNU4-90P-201ENST00000362773 FSCN2O14926 492 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms