RNA–Protein interactions for RNA: ENST00000360244.8

APH1A-202, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APH1A, Length 2,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-202ENST00000360244 SYTL4Q96C24 671 aaPredicted RBP20.86■□□□□ 0.93
APH1A-202ENST00000360244 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.86■□□□□ 0.93
APH1A-202ENST00000360244 KCNJ6P48051 423 aa20.85■□□□□ 0.93
APH1A-202ENST00000360244 NUTM2GQ5VZR2 741 aa20.85■□□□□ 0.93
APH1A-202ENST00000360244 NAA16Q6N069 864 aaPredicted RBP20.85■□□□□ 0.93
APH1A-202ENST00000360244 SMARCC2Q8TAQ2 1214 aa20.85■□□□□ 0.93
APH1A-202ENST00000360244 TUBB4AP04350 444 aa20.85■□□□□ 0.93
APH1A-202ENST00000360244 HNRNPH2P55795 449 aaKnown RBP20.85■□□□□ 0.93
APH1A-202ENST00000360244 SCRN1Q12765 414 aa20.85■□□□□ 0.93
APH1A-202ENST00000360244 ERCC4Q92889 916 aaPredicted RBP20.85■□□□□ 0.93
APH1A-202ENST00000360244 USP28Q96RU2 1077 aa20.85■□□□□ 0.93
APH1A-202ENST00000360244 ZRANB2O95218 330 aaKnown RBP eCLIP20.84■□□□□ 0.93
APH1A-202ENST00000360244 FBXW7Q969H0 707 aa20.84■□□□□ 0.93
APH1A-202ENST00000360244 CHMP4AQ9BY43 222 aa20.84■□□□□ 0.93
APH1A-202ENST00000360244 CEMIPQ8WUJ3 1361 aa20.84■□□□□ 0.93
APH1A-202ENST00000360244 ALDH1L1O75891 902 aa20.83■□□□□ 0.93
APH1A-202ENST00000360244 FSIP1Q8NA03 581 aa20.83■□□□□ 0.93
APH1A-202ENST00000360244 NAP1L2Q9ULW6 460 aaPredicted RBP20.83■□□□□ 0.93
APH1A-202ENST00000360244 SFPQP23246 707 aaKnown RBP eCLIP20.83■□□□□ 0.93
APH1A-202ENST00000360244 HOXC9P31274 260 aa20.83■□□□□ 0.93
APH1A-202ENST00000360244 LLPHQ9BRT6 129 aaKnown RBP20.83■□□□□ 0.93
APH1A-202ENST00000360244 XPO4Q9C0E2 1151 aaKnown RBP20.83■□□□□ 0.93
APH1A-202ENST00000360244 G3BP1Q13283 466 aaKnown RBP eCLIP20.82■□□□□ 0.92
APH1A-202ENST00000360244 TMC6Q7Z403 805 aa20.82■□□□□ 0.92
APH1A-202ENST00000360244 HDAC5Q9UQL6 1122 aa20.82■□□□□ 0.92
APH1A-202ENST00000360244 MAP3K2Q9Y2U5 619 aa20.82■□□□□ 0.92
APH1A-202ENST00000360244 SMC2O95347 1197 aa20.82■□□□□ 0.92
APH1A-202ENST00000360244 HDGFP51858 240 aaKnown RBP20.82■□□□□ 0.92
APH1A-202ENST00000360244 ATL3Q6DD88 541 aa20.82■□□□□ 0.92
APH1A-202ENST00000360244 ARGLU1Q9NWB6 273 aaPredicted RBP20.82■□□□□ 0.92
APH1A-202ENST00000360244 ME1P48163 572 aa20.81■□□□□ 0.92
APH1A-202ENST00000360244 FOSBP53539 338 aa20.81■□□□□ 0.92
APH1A-202ENST00000360244 TMCO3Q6UWJ1 677 aa20.81■□□□□ 0.92
APH1A-202ENST00000360244 NSUN7Q8NE18 718 aaKnown RBP20.81■□□□□ 0.92
APH1A-202ENST00000360244 ZNF396Q96N95 335 aaPredicted RBP20.81■□□□□ 0.92
APH1A-202ENST00000360244 IFNKQ9P0W0 207 aa20.81■□□□□ 0.92
APH1A-202ENST00000360244 ORC3Q9UBD5 711 aaPredicted RBP20.81■□□□□ 0.92
APH1A-202ENST00000360244 COL15A1P39059 1388 aa20.81■□□□□ 0.92
APH1A-202ENST00000360244 PIK3C2AO00443 1686 aa20.8■□□□□ 0.92
APH1A-202ENST00000360244 MED1Q15648 1581 aaPredicted RBP20.8■□□□□ 0.92
APH1A-202ENST00000360244 ETF1P62495 437 aaKnown RBP20.8■□□□□ 0.92
APH1A-202ENST00000360244 PDE4CQ08493 712 aa20.8■□□□□ 0.92
APH1A-202ENST00000360244 CWF19L2Q2TBE0 894 aaKnown RBP20.8■□□□□ 0.92
APH1A-202ENST00000360244 FMR1NBQ8N0W7 255 aaPredicted RBP20.8■□□□□ 0.92
APH1A-202ENST00000360244 UBXN4Q92575 508 aa20.8■□□□□ 0.92
APH1A-202ENST00000360244 BPIFA3Q9BQP9 254 aa20.8■□□□□ 0.92
APH1A-202ENST00000360244 KDM3BQ7LBC6 1761 aa20.8■□□□□ 0.92
APH1A-202ENST00000360244 PHLPP2Q6ZVD8 1323 aa20.8■□□□□ 0.92
APH1A-202ENST00000360244 KCNQ3O43525 872 aa20.8■□□□□ 0.92
APH1A-202ENST00000360244 NRDCO43847 1150 aa20.8■□□□□ 0.92
APH1A-202ENST00000360244 PFKFB2O60825 505 aa20.8■□□□□ 0.92
APH1A-202ENST00000360244 DHX8Q14562 1220 aaKnown RBP20.8■□□□□ 0.92
APH1A-202ENST00000360244 DPCR1Q3MIW9 517 aa20.8■□□□□ 0.92
APH1A-202ENST00000360244 TEX35Q5T0J7 233 aa20.8■□□□□ 0.92
APH1A-202ENST00000360244 AGLP35573 1532 aa20.79■□□□□ 0.92
APH1A-202ENST00000360244 GORABQ5T7V8 394 aa20.79■□□□□ 0.92
APH1A-202ENST00000360244 HOMER1Q86YM7 354 aa20.79■□□□□ 0.92
APH1A-202ENST00000360244 IPO4Q8TEX9 1081 aaKnown RBP20.79■□□□□ 0.92
APH1A-202ENST00000360244 LTV1Q96GA3 475 aaPredicted RBP20.79■□□□□ 0.92
APH1A-202ENST00000360244 SDF4Q9BRK5 362 aa20.79■□□□□ 0.92
APH1A-202ENST00000360244 LRRC2Q9BYS8 371 aa20.79■□□□□ 0.92
APH1A-202ENST00000360244 MRPS27Q92552 414 aaKnown RBP20.79■□□□□ 0.92
APH1A-202ENST00000360244 EDC3Q96F86 508 aaKnown RBP20.79■□□□□ 0.92
APH1A-202ENST00000360244 KAZALD1Q96I82 304 aa20.79■□□□□ 0.92
APH1A-202ENST00000360244 SUCLG2Q96I99 432 aa20.79■□□□□ 0.92
APH1A-202ENST00000360244 TSPYL1Q9H0U9 437 aa20.79■□□□□ 0.92
APH1A-202ENST00000360244 DBF4Q9UBU7 674 aaPredicted RBP20.79■□□□□ 0.92
APH1A-202ENST00000360244 DNAI1Q9UI46 699 aa20.79■□□□□ 0.92
APH1A-202ENST00000360244 PTPDC1A2A3K4 754 aa20.78■□□□□ 0.92
APH1A-202ENST00000360244 CTDNEP1O95476 244 aa20.78■□□□□ 0.92
APH1A-202ENST00000360244 TPM4P67936 248 aa20.78■□□□□ 0.92
APH1A-202ENST00000360244 BICC1Q9H694 974 aaKnown RBP20.78■□□□□ 0.92
APH1A-202ENST00000360244 LGR6Q9HBX8 967 aa20.78■□□□□ 0.92
APH1A-202ENST00000360244 CYP21A2P08686 494 aa20.78■□□□□ 0.92
APH1A-202ENST00000360244 USHBP1Q8N6Y0 703 aa20.78■□□□□ 0.92
APH1A-202ENST00000360244 TRERF1Q96PN7 1200 aa20.78■□□□□ 0.92
APH1A-202ENST00000360244 U3KPZ7 1027 aaPredicted RBP20.78■□□□□ 0.92
APH1A-202ENST00000360244 KSR2Q6VAB6 950 aa20.77■□□□□ 0.92
APH1A-202ENST00000360244 NGDNQ8NEJ9 315 aaKnown RBP20.77■□□□□ 0.92
APH1A-202ENST00000360244 SIL1Q9H173 461 aa20.77■□□□□ 0.92
APH1A-202ENST00000360244 KIAA1468Q9P260 1216 aa20.77■□□□□ 0.92
APH1A-202ENST00000360244 PCDHA7Q9UN72 937 aa20.77■□□□□ 0.92
APH1A-202ENST00000360244 POLR3GO15318 223 aaPredicted RBP20.77■□□□□ 0.91
APH1A-202ENST00000360244 CCP110O43303 1012 aa20.77■□□□□ 0.91
APH1A-202ENST00000360244 NLRP6P59044 892 aa20.77■□□□□ 0.91
APH1A-202ENST00000360244 RAD51AP2Q09MP3 1159 aa20.77■□□□□ 0.91
APH1A-202ENST00000360244 ZRSR1Q15695 479 aaKnown RBP20.77■□□□□ 0.91
APH1A-202ENST00000360244 ILDR1Q86SU0 546 aaPredicted RBP20.77■□□□□ 0.91
APH1A-202ENST00000360244 ADAMTS13Q76LX8 1427 aa20.76■□□□□ 0.91
APH1A-202ENST00000360244 ABCC6O95255 1503 aa20.76■□□□□ 0.91
APH1A-202ENST00000360244 GRM8O00222 908 aa20.76■□□□□ 0.91
APH1A-202ENST00000360244 OSCARQ8IYS5 282 aa20.76■□□□□ 0.91
APH1A-202ENST00000360244 MNS1Q8NEH6 495 aa20.76■□□□□ 0.91
APH1A-202ENST00000360244 SRRTQ9BXP5 876 aaKnown RBP20.76■□□□□ 0.91
APH1A-202ENST00000360244 NCAPD2Q15021 1401 aa20.76■□□□□ 0.91
APH1A-202ENST00000360244 A0A1B0GVL5 298 aa20.75■□□□□ 0.91
APH1A-202ENST00000360244 TADA3O75528 432 aa20.75■□□□□ 0.91
APH1A-202ENST00000360244 ADALQ6DHV7 355 aa20.75■□□□□ 0.91
APH1A-202ENST00000360244 TXLNBQ8N3L3 684 aa20.75■□□□□ 0.91
APH1A-202ENST00000360244 NEK11Q8NG66 645 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms