RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 ERICH6BQ5W0A0 696 aa18.9■□□□□ 0.62
TPM1-206ENST00000358278 FBXO3Q9UK99 471 aa18.9■□□□□ 0.62
TPM1-206ENST00000358278 CCDC88AQ3V6T2 1871 aa18.9■□□□□ 0.62
TPM1-206ENST00000358278 LTBP1Q14766 1721 aa18.9■□□□□ 0.62
TPM1-206ENST00000358278 C21orf2O43822 256 aa18.89■□□□□ 0.61
TPM1-206ENST00000358278 CIAO1O76071 339 aa18.89■□□□□ 0.61
TPM1-206ENST00000358278 G3BP1Q13283 466 aaKnown RBP eCLIP18.89■□□□□ 0.61
TPM1-206ENST00000358278 SP8Q8IXZ3 490 aa18.89■□□□□ 0.61
TPM1-206ENST00000358278 PELP1Q8IZL8 1130 aaKnown RBP18.89■□□□□ 0.61
TPM1-206ENST00000358278 RWDD1Q9H446 243 aaPredicted RBP18.89■□□□□ 0.61
TPM1-206ENST00000358278 EXOC6BQ9Y2D4 811 aa18.89■□□□□ 0.61
TPM1-206ENST00000358278 HDAC1Q13547 482 aaPredicted RBP18.88■□□□□ 0.61
TPM1-206ENST00000358278 MROH5Q6ZUA9 1318 aa18.88■□□□□ 0.61
TPM1-206ENST00000358278 HSP90AB4PQ58FF6 505 aa18.88■□□□□ 0.61
TPM1-206ENST00000358278 METTL24Q5JXM2 366 aa18.88■□□□□ 0.61
TPM1-206ENST00000358278 SOGA3Q5TF21 947 aa18.88■□□□□ 0.61
TPM1-206ENST00000358278 OLFM4Q6UX06 510 aa18.88■□□□□ 0.61
TPM1-206ENST00000358278 SLC51AQ86UW1 340 aa18.88■□□□□ 0.61
TPM1-206ENST00000358278 MINPP1Q9UNW1 487 aa18.88■□□□□ 0.61
TPM1-206ENST00000358278 RIPOR2Q9Y4F9 1068 aa18.88■□□□□ 0.61
TPM1-206ENST00000358278 IL15P40933 162 aaPredicted RBP18.87■□□□□ 0.61
TPM1-206ENST00000358278 CHRNDQ07001 517 aa18.87■□□□□ 0.61
TPM1-206ENST00000358278 ANKIB1Q9P2G1 1089 aa18.87■□□□□ 0.61
TPM1-206ENST00000358278 NOP58Q9Y2X3 529 aaKnown RBP18.87■□□□□ 0.61
TPM1-206ENST00000358278 CCDC93Q567U6 631 aa18.86■□□□□ 0.61
TPM1-206ENST00000358278 CC2D2BQ6DHV5 1058 aa18.86■□□□□ 0.61
TPM1-206ENST00000358278 ATG9AQ7Z3C6 839 aa18.86■□□□□ 0.61
TPM1-206ENST00000358278 C7orf43Q8WVR3 580 aa18.86■□□□□ 0.61
TPM1-206ENST00000358278 APBB1O00213 710 aa18.86■□□□□ 0.61
TPM1-206ENST00000358278 ANKRD2Q9GZV1 360 aa18.86■□□□□ 0.61
TPM1-206ENST00000358278 NSFL1CQ9UNZ2 370 aaKnown RBP18.86■□□□□ 0.61
TPM1-206ENST00000358278 XDHP47989 1333 aa18.85■□□□□ 0.61
TPM1-206ENST00000358278 ERC1Q8IUD2 1116 aa18.85■□□□□ 0.61
TPM1-206ENST00000358278 MPNDQ8N594 471 aa18.85■□□□□ 0.61
TPM1-206ENST00000358278 HELBQ8NG08 1087 aaPredicted RBP18.85■□□□□ 0.61
TPM1-206ENST00000358278 ARAP2Q8WZ64 1704 aa18.85■□□□□ 0.61
TPM1-206ENST00000358278 CCDC136Q96JN2 1154 aa18.85■□□□□ 0.61
TPM1-206ENST00000358278 DCTPP1Q9H773 170 aa18.85■□□□□ 0.61
TPM1-206ENST00000358278 CEP126Q9P2H0 1117 aa18.85■□□□□ 0.61
TPM1-206ENST00000358278 DUOX1Q9NRD9 1551 aa18.84■□□□□ 0.61
TPM1-206ENST00000358278 GPSM2P81274 684 aa18.84■□□□□ 0.61
TPM1-206ENST00000358278 DPP8Q6V1X1 898 aaPredicted RBP18.84■□□□□ 0.61
TPM1-206ENST00000358278 CHD4Q14839 1912 aa18.84■□□□□ 0.61
TPM1-206ENST00000358278 MYH13Q9UKX3 1938 aa18.84■□□□□ 0.61
TPM1-206ENST00000358278 TAF5LO75529 589 aa18.83■□□□□ 0.61
TPM1-206ENST00000358278 IGHDP01880 384 aa18.83■□□□□ 0.61
TPM1-206ENST00000358278 KCNJ4P48050 445 aa18.83■□□□□ 0.61
TPM1-206ENST00000358278 GPR162Q16538 588 aa18.83■□□□□ 0.61
TPM1-206ENST00000358278 GRIPAP1Q4V328 841 aa18.83■□□□□ 0.61
TPM1-206ENST00000358278 RTKN2Q8IZC4 609 aa18.83■□□□□ 0.61
TPM1-206ENST00000358278 GCC1Q96CN9 775 aa18.83■□□□□ 0.61
TPM1-206ENST00000358278 SBF1O95248 1867 aa18.83■□□□□ 0.61
TPM1-206ENST00000358278 RAB11FIP3O75154 756 aa18.83■□□□□ 0.6
TPM1-206ENST00000358278 PPP4R2Q9NY27 417 aa18.83■□□□□ 0.6
TPM1-206ENST00000358278 GGA1Q9UJY5 639 aa18.83■□□□□ 0.6
TPM1-206ENST00000358278 SNED1Q8TER0 1413 aa18.82■□□□□ 0.6
TPM1-206ENST00000358278 UFL1O94874 794 aa18.82■□□□□ 0.6
TPM1-206ENST00000358278 SASH1O94885 1247 aa18.82■□□□□ 0.6
TPM1-206ENST00000358278 PDE8BO95263 885 aa18.82■□□□□ 0.6
TPM1-206ENST00000358278 YBX3P16989 372 aaKnown RBP eCLIP18.82■□□□□ 0.6
TPM1-206ENST00000358278 TFCP2Q12800 502 aa18.82■□□□□ 0.6
TPM1-206ENST00000358278 VGLL2Q8N8G2 317 aa18.82■□□□□ 0.6
TPM1-206ENST00000358278 KIF1BPQ96EK5 621 aa18.82■□□□□ 0.6
TPM1-206ENST00000358278 BCL11AQ9H165 835 aa18.82■□□□□ 0.6
TPM1-206ENST00000358278 PODXL2Q9NZ53 605 aa18.82■□□□□ 0.6
TPM1-206ENST00000358278 DICER1Q9UPY3 1922 aaKnown RBP18.81■□□□□ 0.6
TPM1-206ENST00000358278 C6orf229H3BNL8 230 aa18.81■□□□□ 0.6
TPM1-206ENST00000358278 ATP2B4P23634 1241 aa18.8■□□□□ 0.6
TPM1-206ENST00000358278 PUM3Q15397 648 aaKnown RBP18.8■□□□□ 0.6
TPM1-206ENST00000358278 RHPN1Q8TCX5 695 aa18.8■□□□□ 0.6
TPM1-206ENST00000358278 LRRCC1Q9C099 1032 aa18.8■□□□□ 0.6
TPM1-206ENST00000358278 ZBTB47Q9UFB7 747 aaPredicted RBP18.8■□□□□ 0.6
TPM1-206ENST00000358278 ZNF804BA4D1E1 1349 aa18.8■□□□□ 0.6
TPM1-206ENST00000358278 TBC1D16Q8TBP0 767 aa18.8■□□□□ 0.6
TPM1-206ENST00000358278 TAOK3Q9H2K8 898 aa18.8■□□□□ 0.6
TPM1-206ENST00000358278 AKAP2Q9Y2D5 859 aa18.8■□□□□ 0.6
TPM1-206ENST00000358278 LEMD3Q9Y2U8 911 aa18.8■□□□□ 0.6
TPM1-206ENST00000358278 ZNF609O15014 1411 aa18.79■□□□□ 0.6
TPM1-206ENST00000358278 FKBP4Q02790 459 aaKnown RBP eCLIP18.79■□□□□ 0.6
TPM1-206ENST00000358278 UBE4AQ14139 1066 aa18.79■□□□□ 0.6
TPM1-206ENST00000358278 ATP2B3Q16720 1220 aa18.79■□□□□ 0.6
TPM1-206ENST00000358278 B4GALNT3Q6L9W6 998 aa18.79■□□□□ 0.6
TPM1-206ENST00000358278 ARHGAP27Q6ZUM4 889 aa18.79■□□□□ 0.6
TPM1-206ENST00000358278 SUPT20HQ8NEM7 779 aa18.79■□□□□ 0.6
TPM1-206ENST00000358278 PSMD1Q99460 953 aa18.79■□□□□ 0.6
TPM1-206ENST00000358278 IL1RAPL2Q9NP60 686 aa18.79■□□□□ 0.6
TPM1-206ENST00000358278 POLLQ9UGP5 575 aa18.79■□□□□ 0.6
TPM1-206ENST00000358278 SNAP23O00161 211 aa18.78■□□□□ 0.6
TPM1-206ENST00000358278 SMC5Q8IY18 1101 aa18.78■□□□□ 0.6
TPM1-206ENST00000358278 SLC5A1P13866 664 aa18.77■□□□□ 0.6
TPM1-206ENST00000358278 CLASRPQ8N2M8 674 aaKnown RBP18.77■□□□□ 0.6
TPM1-206ENST00000358278 LPIN2Q92539 896 aa18.77■□□□□ 0.6
TPM1-206ENST00000358278 RTFDC1Q9BY42 306 aaPredicted RBP18.77■□□□□ 0.6
TPM1-206ENST00000358278 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.77■□□□□ 0.6
TPM1-206ENST00000358278 A0A1B0GUL7 405 aa18.77■□□□□ 0.59
TPM1-206ENST00000358278 DCAF8L1A6NGE4 600 aa18.77■□□□□ 0.59
TPM1-206ENST00000358278 WTIPA6NIX2 430 aaPredicted RBP18.77■□□□□ 0.59
TPM1-206ENST00000358278 NFKBIEO00221 500 aa18.77■□□□□ 0.59
TPM1-206ENST00000358278 GRIN3BO60391 1043 aa18.77■□□□□ 0.59
TPM1-206ENST00000358278 IFIT1P09914 478 aaKnown RBP18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms