RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 TGFB2P61812 414 aa5.08□□□□□ -1.6
CNOT4-202ENST00000356162 ST5P78524 1137 aa5.08□□□□□ -1.6
CNOT4-202ENST00000356162 BICDL1Q6ZP65 573 aa5.08□□□□□ -1.6
CNOT4-202ENST00000356162 ZNF34Q8IZ26 560 aa5.08□□□□□ -1.6
CNOT4-202ENST00000356162 CNBD1Q8NA66 436 aa5.08□□□□□ -1.6
CNOT4-202ENST00000356162 SYT17Q9BSW7 474 aa5.08□□□□□ -1.6
CNOT4-202ENST00000356162 NIP7Q9Y221 180 aaKnown RBP eCLIP5.08□□□□□ -1.6
CNOT4-202ENST00000356162 UBN2Q6ZU65 1347 aa5.08□□□□□ -1.6
CNOT4-202ENST00000356162 ADCY9O60503 1353 aa5.08□□□□□ -1.6
CNOT4-202ENST00000356162 AIMP1Q12904 312 aaKnown RBP5.08□□□□□ -1.6
CNOT4-202ENST00000356162 TCIRG1Q13488 830 aa5.08□□□□□ -1.6
CNOT4-202ENST00000356162 ALDH1L2Q3SY69 923 aa5.08□□□□□ -1.6
CNOT4-202ENST00000356162 TPRNQ4KMQ1 711 aa5.08□□□□□ -1.6
CNOT4-202ENST00000356162 PRR5LQ6MZQ0 368 aa5.08□□□□□ -1.6
CNOT4-202ENST00000356162 NBPF5PQ86XG9 351 aaPredicted RBP5.08□□□□□ -1.6
CNOT4-202ENST00000356162 CDCA7LQ96GN5 454 aa5.08□□□□□ -1.6
CNOT4-202ENST00000356162 CACNA1SQ13698 1873 aa5.07□□□□□ -1.6
CNOT4-202ENST00000356162 ABCC12Q96J65 1359 aa5.07□□□□□ -1.6
CNOT4-202ENST00000356162 GOLGA8CPA6NN73 597 aa5.07□□□□□ -1.6
CNOT4-202ENST00000356162 RBAK-RBAKDNI3L0D1 243 aa5.07□□□□□ -1.6
CNOT4-202ENST00000356162 NTSR2O95665 410 aa5.07□□□□□ -1.6
CNOT4-202ENST00000356162 FLIIQ13045 1269 aa5.07□□□□□ -1.6
CNOT4-202ENST00000356162 THSD4Q6ZMP0 1018 aa5.07□□□□□ -1.6
CNOT4-202ENST00000356162 PPP1R42Q7Z4L9 355 aa5.07□□□□□ -1.6
CNOT4-202ENST00000356162 LAPTM4BQ86VI4 370 aa5.07□□□□□ -1.6
CNOT4-202ENST00000356162 NLGN2Q8NFZ4 835 aa5.07□□□□□ -1.6
CNOT4-202ENST00000356162 WNT2BQ93097 391 aa5.07□□□□□ -1.6
CNOT4-202ENST00000356162 ISCA1Q9BUE6 129 aa5.07□□□□□ -1.6
CNOT4-202ENST00000356162 PHAXQ9H814 394 aaKnown RBP5.07□□□□□ -1.6
CNOT4-202ENST00000356162 MYH3P11055 1940 aa5.07□□□□□ -1.6
CNOT4-202ENST00000356162 TRIM28Q13263 835 aaKnown RBP5.07□□□□□ -1.6
CNOT4-202ENST00000356162 KSR2Q6VAB6 950 aa5.07□□□□□ -1.6
CNOT4-202ENST00000356162 RIC3Q7Z5B4 369 aa5.07□□□□□ -1.6
CNOT4-202ENST00000356162 METTL22Q9BUU2 404 aaPredicted RBP5.07□□□□□ -1.6
CNOT4-202ENST00000356162 LRRC37AA6NMS7 1700 aa5.07□□□□□ -1.6
CNOT4-202ENST00000356162 NPHP1O15259 732 aa5.06□□□□□ -1.6
CNOT4-202ENST00000356162 GPTP24298 496 aa5.06□□□□□ -1.6
CNOT4-202ENST00000356162 PDE6BP35913 854 aa5.06□□□□□ -1.6
CNOT4-202ENST00000356162 TPTE2Q6XPS3 522 aa5.06□□□□□ -1.6
CNOT4-202ENST00000356162 NLRP10Q86W26 655 aa5.06□□□□□ -1.6
CNOT4-202ENST00000356162 UTP14AQ9BVJ6 771 aaKnown RBP5.06□□□□□ -1.6
CNOT4-202ENST00000356162 BRIP1Q9BX63 1249 aa5.06□□□□□ -1.6
CNOT4-202ENST00000356162 TSKSQ9UJT2 592 aa5.06□□□□□ -1.6
CNOT4-202ENST00000356162 PTPRCP08575 1304 aa5.06□□□□□ -1.6
CNOT4-202ENST00000356162 CHD4Q14839 1912 aa5.06□□□□□ -1.6
CNOT4-202ENST00000356162 TCERG1O14776 1098 aaKnown RBP5.06□□□□□ -1.6
CNOT4-202ENST00000356162 DPEP1P16444 411 aa5.06□□□□□ -1.6
CNOT4-202ENST00000356162 BRPF1P55201 1214 aaPredicted RBP5.06□□□□□ -1.6
CNOT4-202ENST00000356162 FKBP5Q13451 457 aaPredicted RBP5.06□□□□□ -1.6
CNOT4-202ENST00000356162 SUSD4Q5VX71 490 aa5.06□□□□□ -1.6
CNOT4-202ENST00000356162 G2E3Q7L622 706 aa5.06□□□□□ -1.6
CNOT4-202ENST00000356162 C2CD5Q86YS7 1000 aa5.06□□□□□ -1.6
CNOT4-202ENST00000356162 MYD88Q99836 296 aa5.06□□□□□ -1.6
CNOT4-202ENST00000356162 CDHR5Q9HBB8 845 aa5.06□□□□□ -1.6
CNOT4-202ENST00000356162 MAP3K2Q9Y2U5 619 aa5.06□□□□□ -1.6
CNOT4-202ENST00000356162 KIF16BQ96L93 1317 aa5.06□□□□□ -1.6
CNOT4-202ENST00000356162 KLRG2A4D1S0 409 aaPredicted RBP5.05□□□□□ -1.6
CNOT4-202ENST00000356162 MLLT3P42568 568 aaPredicted RBP5.05□□□□□ -1.6
CNOT4-202ENST00000356162 PRSS12P56730 875 aa5.05□□□□□ -1.6
CNOT4-202ENST00000356162 NEXNQ0ZGT2 675 aa5.05□□□□□ -1.6
CNOT4-202ENST00000356162 STYK1Q6J9G0 422 aa5.05□□□□□ -1.6
CNOT4-202ENST00000356162 CCDC191Q8NCU4 936 aa5.05□□□□□ -1.6
CNOT4-202ENST00000356162 SH3TC1Q8TE82 1336 aa5.05□□□□□ -1.6
CNOT4-202ENST00000356162 DNAAF4Q8WXU2 420 aa5.05□□□□□ -1.6
CNOT4-202ENST00000356162 SSH1Q8WYL5 1049 aa5.05□□□□□ -1.6
CNOT4-202ENST00000356162 SMC4Q9NTJ3 1288 aa5.05□□□□□ -1.6
CNOT4-202ENST00000356162 CDHR2Q9BYE9 1310 aa5.05□□□□□ -1.6
CNOT4-202ENST00000356162 PI4KAP2A4QPH2 592 aa5.05□□□□□ -1.6
CNOT4-202ENST00000356162 H0YIN7 160 aa5.05□□□□□ -1.6
CNOT4-202ENST00000356162 HSP90B1P14625 803 aaKnown RBP5.05□□□□□ -1.6
CNOT4-202ENST00000356162 GTF2E1P29083 439 aaPredicted RBP5.05□□□□□ -1.6
CNOT4-202ENST00000356162 PTPN5P54829 565 aa5.05□□□□□ -1.6
CNOT4-202ENST00000356162 ERFEQ4G0M1 354 aa5.05□□□□□ -1.6
CNOT4-202ENST00000356162 SLC10A5Q5PT55 438 aa5.05□□□□□ -1.6
CNOT4-202ENST00000356162 PI4KAP1Q8N8J0 262 aa5.05□□□□□ -1.6
CNOT4-202ENST00000356162 CWC25Q9NXE8 425 aaPredicted RBP5.05□□□□□ -1.6
CNOT4-202ENST00000356162 SEPT9Q9UHD8 586 aaPredicted RBP5.05□□□□□ -1.6
CNOT4-202ENST00000356162 FER1L6Q2WGJ9 1857 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 SLX4Q8IY92 1834 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 FAM177BA6PVY3 158 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 NEURL1BA8MQ27 555 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 ATP5J2-PTCD1G3V325 749 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 PCCAP05165 728 aaPredicted RBP5.04□□□□□ -1.6
CNOT4-202ENST00000356162 NPR1P16066 1061 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 RARSP54136 660 aaKnown RBP5.04□□□□□ -1.6
CNOT4-202ENST00000356162 CRY2Q49AN0 593 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 PACS2Q86VP3 889 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 NUTM1Q86Y26 1132 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 ZBTB38Q8NAP3 1195 aaPredicted RBP5.04□□□□□ -1.6
CNOT4-202ENST00000356162 ANKK1Q8NFD2 765 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 LINS1Q8NG48 757 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 CNKSR1Q969H4 720 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 MASTLQ96GX5 879 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 ZFRQ96KR1 1074 aaKnown RBP5.04□□□□□ -1.6
CNOT4-202ENST00000356162 PIM2Q9P1W9 311 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 FAM198AQ9UFP1 575 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 TRMT112Q9UI30 125 aaKnown RBP5.04□□□□□ -1.6
CNOT4-202ENST00000356162 TIAM2Q8IVF5 1701 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 A0A0G2JLW4 131 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 GRIN3BO60391 1043 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms