RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 TMEM110-MUSTN1A8MSY1 372 aa16.91■□□□□ 0.3
LMX1B-201ENST00000355497 SYT1P21579 422 aa16.91■□□□□ 0.3
LMX1B-201ENST00000355497 NME9Q86XW9 330 aa16.91■□□□□ 0.3
LMX1B-201ENST00000355497 MICALL1Q8N3F8 863 aa16.91■□□□□ 0.3
LMX1B-201ENST00000355497 IFIT1BQ5T764 474 aaKnown RBP16.91■□□□□ 0.3
LMX1B-201ENST00000355497 CCDC186Q7Z3E2 898 aa16.91■□□□□ 0.3
LMX1B-201ENST00000355497 BRF1Q92994 677 aa16.91■□□□□ 0.3
LMX1B-201ENST00000355497 TEX13AQ9BXU3 409 aaPredicted RBP16.91■□□□□ 0.3
LMX1B-201ENST00000355497 GJC1P36383 396 aa16.91■□□□□ 0.3
LMX1B-201ENST00000355497 TBC1D32Q96NH3 1257 aa16.91■□□□□ 0.3
LMX1B-201ENST00000355497 PTGS1P23219 599 aa16.9■□□□□ 0.3
LMX1B-201ENST00000355497 PAXIP1Q6ZW49 1069 aaPredicted RBP16.9■□□□□ 0.3
LMX1B-201ENST00000355497 PPP1R42Q7Z4L9 355 aa16.9■□□□□ 0.3
LMX1B-201ENST00000355497 TMTC2Q8N394 836 aa16.9■□□□□ 0.3
LMX1B-201ENST00000355497 CNNM2Q9H8M5 875 aa16.9■□□□□ 0.3
LMX1B-201ENST00000355497 SLU7O95391 586 aaKnown RBP16.9■□□□□ 0.3
LMX1B-201ENST00000355497 EEF2P13639 858 aaKnown RBP16.9■□□□□ 0.3
LMX1B-201ENST00000355497 HSP90AA4PQ58FG1 418 aa16.9■□□□□ 0.3
LMX1B-201ENST00000355497 NECAB1Q8N987 351 aa16.9■□□□□ 0.3
LMX1B-201ENST00000355497 CCDC141Q6ZP82 1450 aa16.9■□□□□ 0.3
LMX1B-201ENST00000355497 ASIC1P78348 528 aa16.9■□□□□ 0.3
LMX1B-201ENST00000355497 USP48Q86UV5 1035 aa16.9■□□□□ 0.3
LMX1B-201ENST00000355497 KRT86O43790 486 aa16.9■□□□□ 0.3
LMX1B-201ENST00000355497 TRAF1Q13077 416 aa16.9■□□□□ 0.3
LMX1B-201ENST00000355497 RTN1Q16799 776 aa16.9■□□□□ 0.3
LMX1B-201ENST00000355497 CCDC50Q8IVM0 306 aa16.9■□□□□ 0.3
LMX1B-201ENST00000355497 HEATR3Q7Z4Q2 680 aa16.89■□□□□ 0.29
LMX1B-201ENST00000355497 EMILIN1Q9Y6C2 1016 aa16.89■□□□□ 0.29
LMX1B-201ENST00000355497 CAPN2P17655 700 aa16.89■□□□□ 0.29
LMX1B-201ENST00000355497 TPD52P55327 224 aaPredicted RBP16.89■□□□□ 0.29
LMX1B-201ENST00000355497 TSHZ3Q63HK5 1081 aa16.89■□□□□ 0.29
LMX1B-201ENST00000355497 TUBB4BP68371 445 aa16.89■□□□□ 0.29
LMX1B-201ENST00000355497 KIF5AQ12840 1032 aa16.89■□□□□ 0.29
LMX1B-201ENST00000355497 WAPLQ7Z5K2 1190 aa16.88■□□□□ 0.29
LMX1B-201ENST00000355497 IMPG2Q9BZV3 1241 aa16.88■□□□□ 0.29
LMX1B-201ENST00000355497 NBPF11Q86T75 865 aa16.88■□□□□ 0.29
LMX1B-201ENST00000355497 RTL1A6NKG5 1358 aa16.88■□□□□ 0.29
LMX1B-201ENST00000355497 CLGNO14967 610 aa16.88■□□□□ 0.29
LMX1B-201ENST00000355497 ESR2Q92731 530 aa16.88■□□□□ 0.29
LMX1B-201ENST00000355497 STX8Q9UNK0 236 aa16.88■□□□□ 0.29
LMX1B-201ENST00000355497 CAMSAP2Q08AD1 1489 aa16.88■□□□□ 0.29
LMX1B-201ENST00000355497 ARAP1Q96P48 1450 aa16.88■□□□□ 0.29
LMX1B-201ENST00000355497 CEP83Q9Y592 693 aa16.88■□□□□ 0.29
LMX1B-201ENST00000355497 TROQ12816 1431 aaPredicted RBP16.88■□□□□ 0.29
LMX1B-201ENST00000355497 ZFYP08048 801 aaPredicted RBP16.87■□□□□ 0.29
LMX1B-201ENST00000355497 KIAA1524Q8TCG1 905 aa16.87■□□□□ 0.29
LMX1B-201ENST00000355497 DNAJC25Q9H1X3 360 aa16.87■□□□□ 0.29
LMX1B-201ENST00000355497 ATP5J2-PTCD1G3V325 749 aa16.87■□□□□ 0.29
LMX1B-201ENST00000355497 CAPZA3Q96KX2 299 aa16.87■□□□□ 0.29
LMX1B-201ENST00000355497 SUPT6HQ7KZ85 1726 aaKnown RBP16.87■□□□□ 0.29
LMX1B-201ENST00000355497 ATP2A2P16615 1042 aaKnown RBP16.87■□□□□ 0.29
LMX1B-201ENST00000355497 CEP57Q86XR8 500 aa16.87■□□□□ 0.29
LMX1B-201ENST00000355497 NAIPQ13075 1403 aa16.87■□□□□ 0.29
LMX1B-201ENST00000355497 EBAG9O00559 213 aa16.87■□□□□ 0.29
LMX1B-201ENST00000355497 UBE3BQ7Z3V4 1068 aa16.87■□□□□ 0.29
LMX1B-201ENST00000355497 VPS18Q9P253 973 aa16.87■□□□□ 0.29
LMX1B-201ENST00000355497 SLC4A4Q9Y6R1 1079 aa16.87■□□□□ 0.29
LMX1B-201ENST00000355497 TTC21BQ7Z4L5 1316 aa16.87■□□□□ 0.29
LMX1B-201ENST00000355497 FAM13AO94988 1023 aa16.87■□□□□ 0.29
LMX1B-201ENST00000355497 GNAQP50148 359 aa16.87■□□□□ 0.29
LMX1B-201ENST00000355497 TERF1P54274 439 aa16.87■□□□□ 0.29
LMX1B-201ENST00000355497 BICDL2A1A5D9 508 aa16.86■□□□□ 0.29
LMX1B-201ENST00000355497 CA8P35219 290 aa16.86■□□□□ 0.29
LMX1B-201ENST00000355497 PLCB3Q01970 1234 aa16.86■□□□□ 0.29
LMX1B-201ENST00000355497 ARID5AQ03989 594 aa16.86■□□□□ 0.29
LMX1B-201ENST00000355497 CPLX4Q7Z7G2 160 aa16.86■□□□□ 0.29
LMX1B-201ENST00000355497 ANKRD24Q8TF21 1146 aa16.86■□□□□ 0.29
LMX1B-201ENST00000355497 SETDB1Q15047 1291 aa16.86■□□□□ 0.29
LMX1B-201ENST00000355497 DHX58Q96C10 678 aa16.86■□□□□ 0.29
LMX1B-201ENST00000355497 CCDC42Q96M95 316 aa16.86■□□□□ 0.29
LMX1B-201ENST00000355497 SAMD15Q9P1V8 674 aa16.86■□□□□ 0.29
LMX1B-201ENST00000355497 ALDH3A1P30838 453 aa16.85■□□□□ 0.29
LMX1B-201ENST00000355497 TTC31Q49AM3 519 aaPredicted RBP16.85■□□□□ 0.29
LMX1B-201ENST00000355497 NEK11Q8NG66 645 aa16.85■□□□□ 0.29
LMX1B-201ENST00000355497 WDR66Q8TBY9 1149 aa16.85■□□□□ 0.29
LMX1B-201ENST00000355497 MARCKSP29966 332 aaPredicted RBP16.85■□□□□ 0.29
LMX1B-201ENST00000355497 NAPAP54920 295 aa16.85■□□□□ 0.29
LMX1B-201ENST00000355497 NUCB1Q02818 461 aa16.85■□□□□ 0.29
LMX1B-201ENST00000355497 CCDC152Q4G0S7 254 aa16.85■□□□□ 0.29
LMX1B-201ENST00000355497 Q6ZUG5 572 aa16.85■□□□□ 0.29
LMX1B-201ENST00000355497 SMIM23A6NLE4 172 aa16.85■□□□□ 0.29
LMX1B-201ENST00000355497 F13A1P00488 732 aa16.85■□□□□ 0.29
LMX1B-201ENST00000355497 RHPN1Q8TCX5 695 aa16.85■□□□□ 0.29
LMX1B-201ENST00000355497 DACT1Q9NYF0 836 aa16.85■□□□□ 0.29
LMX1B-201ENST00000355497 MTRF1LQ9UGC7 380 aaKnown RBP16.85■□□□□ 0.29
LMX1B-201ENST00000355497 CYP7A1P22680 504 aa16.85■□□□□ 0.29
LMX1B-201ENST00000355497 UBXN1Q04323 297 aa16.85■□□□□ 0.29
LMX1B-201ENST00000355497 MBIPQ9NS73 344 aa16.85■□□□□ 0.29
LMX1B-201ENST00000355497 TXNDC16Q9P2K2 825 aa16.85■□□□□ 0.29
LMX1B-201ENST00000355497 CFAP58Q5T655 872 aa16.84■□□□□ 0.29
LMX1B-201ENST00000355497 SMARCC2Q8TAQ2 1214 aa16.84■□□□□ 0.29
LMX1B-201ENST00000355497 SEC62Q99442 399 aaKnown RBP16.84■□□□□ 0.29
LMX1B-201ENST00000355497 LRRC2Q9BYS8 371 aa16.84■□□□□ 0.29
LMX1B-201ENST00000355497 STIM2Q9P246 746 aa16.84■□□□□ 0.29
LMX1B-201ENST00000355497 ODF2LQ9ULJ1 636 aa16.84■□□□□ 0.29
LMX1B-201ENST00000355497 CFAP157Q5JU67 520 aa16.84■□□□□ 0.29
LMX1B-201ENST00000355497 ZGPATQ8N5A5 531 aaKnown RBP16.84■□□□□ 0.29
LMX1B-201ENST00000355497 ARFGAP2Q8N6H7 521 aa16.84■□□□□ 0.29
LMX1B-201ENST00000355497 IFT81Q8WYA0 676 aa16.84■□□□□ 0.29
LMX1B-201ENST00000355497 CCDC114Q96M63 670 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms