RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 GOLGA8FQ08AF8 430 aa7.06□□□□□ -1.28
CD47-201ENST00000355354 GOLGA8DPQ0D2H9 430 aa7.06□□□□□ -1.28
CD47-201ENST00000355354 CAVIN1Q6NZI2 390 aaKnown RBP7.06□□□□□ -1.28
CD47-201ENST00000355354 ERICH6Q7L0X2 663 aa7.06□□□□□ -1.28
CD47-201ENST00000355354 AIFM3Q96NN9 605 aa7.06□□□□□ -1.28
CD47-201ENST00000355354 PCDH11XQ9BZA7 1347 aa7.06□□□□□ -1.28
CD47-201ENST00000355354 PCDH11YQ9BZA8 1340 aa7.06□□□□□ -1.28
CD47-201ENST00000355354 POLR2AP24928 1970 aaKnown RBP7.05□□□□□ -1.28
CD47-201ENST00000355354 SYCE3A1L190 88 aa7.05□□□□□ -1.28
CD47-201ENST00000355354 MS4A1P11836 297 aa7.05□□□□□ -1.28
CD47-201ENST00000355354 HCLS1P14317 486 aaPredicted RBP7.05□□□□□ -1.28
CD47-201ENST00000355354 FAM182AQ5T1J6 154 aa7.05□□□□□ -1.28
CD47-201ENST00000355354 STRN4Q9NRL3 753 aa7.05□□□□□ -1.28
CD47-201ENST00000355354 NOM1Q5C9Z4 860 aaKnown RBP7.05□□□□□ -1.28
CD47-201ENST00000355354 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.05□□□□□ -1.28
CD47-201ENST00000355354 V9GYY5 206 aaPredicted RBP7.05□□□□□ -1.28
CD47-201ENST00000355354 C1QTNF8P60827 252 aa7.05□□□□□ -1.28
CD47-201ENST00000355354 SCARF1Q14162 830 aa7.05□□□□□ -1.28
CD47-201ENST00000355354 NFATC2IPQ8NCF5 419 aa7.05□□□□□ -1.28
CD47-201ENST00000355354 ZHX1Q9UKY1 873 aaPredicted RBP7.05□□□□□ -1.28
CD47-201ENST00000355354 SLC4A2P04920 1241 aa7.04□□□□□ -1.28
CD47-201ENST00000355354 MED15Q96RN5 788 aa7.04□□□□□ -1.28
CD47-201ENST00000355354 SEC31BQ9NQW1 1179 aa7.04□□□□□ -1.28
CD47-201ENST00000355354 E9PSI1 815 aa7.04□□□□□ -1.28
CD47-201ENST00000355354 RASGRP2Q7LDG7 609 aa7.04□□□□□ -1.28
CD47-201ENST00000355354 FRMPD3Q5JV73 1810 aa7.04□□□□□ -1.28
CD47-201ENST00000355354 DCAF5Q96JK2 942 aa7.04□□□□□ -1.28
CD47-201ENST00000355354 POLD4Q9HCU8 107 aa7.04□□□□□ -1.28
CD47-201ENST00000355354 PYCARDQ9ULZ3 195 aa7.04□□□□□ -1.28
CD47-201ENST00000355354 PTPRFP10586 1907 aa7.04□□□□□ -1.28
CD47-201ENST00000355354 MPRIPQ6WCQ1 1025 aa7.04□□□□□ -1.28
CD47-201ENST00000355354 EEF2KMTQ96G04 330 aa7.04□□□□□ -1.28
CD47-201ENST00000355354 SASH1O94885 1247 aa7.03□□□□□ -1.28
CD47-201ENST00000355354 JAK2O60674 1132 aa7.03□□□□□ -1.28
CD47-201ENST00000355354 PDE3AQ14432 1141 aa7.03□□□□□ -1.28
CD47-201ENST00000355354 TWISTNBQ3B726 338 aaPredicted RBP7.03□□□□□ -1.28
CD47-201ENST00000355354 ALPK3Q96L96 1907 aa7.03□□□□□ -1.28
CD47-201ENST00000355354 COBLO75128 1261 aa7.03□□□□□ -1.28
CD47-201ENST00000355354 PRPF40AO75400 957 aaKnown RBP7.03□□□□□ -1.28
CD47-201ENST00000355354 VPS13CQ709C8 3753 aa7.03□□□□□ -1.28
CD47-201ENST00000355354 CELSR2Q9HCU4 2923 aa7.03□□□□□ -1.28
CD47-201ENST00000355354 RGL2O15211 777 aa7.03□□□□□ -1.28
CD47-201ENST00000355354 C7orf43Q8WVR3 580 aa7.03□□□□□ -1.28
CD47-201ENST00000355354 TFIP11Q9UBB9 837 aaKnown RBP7.03□□□□□ -1.28
CD47-201ENST00000355354 LIG1P18858 919 aa7.02□□□□□ -1.29
CD47-201ENST00000355354 PPARDQ03181 441 aa7.02□□□□□ -1.29
CD47-201ENST00000355354 CCDC27Q2M243 656 aa7.02□□□□□ -1.29
CD47-201ENST00000355354 STOX1Q6ZVD7 989 aa7.02□□□□□ -1.29
CD47-201ENST00000355354 GPIHBP1Q8IV16 184 aa7.02□□□□□ -1.29
CD47-201ENST00000355354 NGEFQ8N5V2 710 aa7.02□□□□□ -1.29
CD47-201ENST00000355354 CENPEQ02224 2701 aa7.02□□□□□ -1.29
CD47-201ENST00000355354 RBM25P49756 843 aaKnown RBP7.02□□□□□ -1.29
CD47-201ENST00000355354 FOSBP53539 338 aa7.02□□□□□ -1.29
CD47-201ENST00000355354 VSIG10Q8N0Z9 540 aa7.02□□□□□ -1.29
CD47-201ENST00000355354 IGKV5-2P06315 115 aa7.02□□□□□ -1.29
CD47-201ENST00000355354 TTLL5Q6EMB2 1281 aa7.02□□□□□ -1.29
CD47-201ENST00000355354 HINFPQ9BQA5 517 aa7.02□□□□□ -1.29
CD47-201ENST00000355354 ABCC4O15439 1325 aa7.02□□□□□ -1.29
CD47-201ENST00000355354 LOC285556D6RIA3 1793 aa7.02□□□□□ -1.29
CD47-201ENST00000355354 PARP14Q460N5 1801 aa7.02□□□□□ -1.29
CD47-201ENST00000355354 DDX60LQ5H9U9 1706 aaKnown RBP7.02□□□□□ -1.29
CD47-201ENST00000355354 PI4K2BQ8TCG2 481 aa7.02□□□□□ -1.29
CD47-201ENST00000355354 LRRFIP2Q9Y608 721 aaKnown RBP7.02□□□□□ -1.29
CD47-201ENST00000355354 PLXNB2O15031 1838 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 EXOC5O00471 708 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 RAB3GAP1Q15042 981 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 GIMAP6Q6P9H5 292 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 EAF2Q96CJ1 260 aaPredicted RBP7.01□□□□□ -1.29
CD47-201ENST00000355354 ZBTB7AO95365 584 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 GYS1P13807 737 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 GRIN1Q05586 938 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 CCDC144BQ3MJ40 725 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 HSP90AA4PQ58FG1 418 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 MCTP1Q6DN14 999 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 TOM1L2Q6ZVM7 507 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 CCDC144CPQ8IYA2 1237 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 RTTNQ86VV8 2226 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 SIPA1L1O43166 1804 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 CHL1O00533 1208 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 DDR1Q08345 913 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 PDIA6Q15084 440 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 ERICH6BQ5W0A0 696 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 RUFY3Q7L099 469 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 MGAMO43451 1857 aa7.01□□□□□ -1.29
CD47-201ENST00000355354 RPAP1Q9BWH6 1393 aaPredicted RBP7□□□□□ -1.29
CD47-201ENST00000355354 IBTKQ9P2D0 1353 aaPredicted RBP7□□□□□ -1.29
CD47-201ENST00000355354 PDE3BQ13370 1112 aa7□□□□□ -1.29
CD47-201ENST00000355354 GRPEL1Q9HAV7 217 aa7□□□□□ -1.29
CD47-201ENST00000355354 ZCRB1Q8TBF4 217 aaKnown RBP7□□□□□ -1.29
CD47-201ENST00000355354 TFR2Q9UP52 801 aa7□□□□□ -1.29
CD47-201ENST00000355354 USP42Q9H9J4 1324 aaKnown RBP7□□□□□ -1.29
CD47-201ENST00000355354 ESPNB1AK53 854 aa7□□□□□ -1.29
CD47-201ENST00000355354 POLRMTO00411 1230 aaKnown RBP7□□□□□ -1.29
CD47-201ENST00000355354 IFFO2Q5TF58 517 aa7□□□□□ -1.29
CD47-201ENST00000355354 CNPY2Q9Y2B0 182 aa7□□□□□ -1.29
CD47-201ENST00000355354 LTBP3Q9NS15 1303 aa7□□□□□ -1.29
CD47-201ENST00000355354 LRBAP50851 2863 aa7□□□□□ -1.29
CD47-201ENST00000355354 ERVV-2B6SEH9 535 aa7□□□□□ -1.29
CD47-201ENST00000355354 CCDC24Q8N4L8 307 aa7□□□□□ -1.29
CD47-201ENST00000355354 DNAJC25Q9H1X3 360 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms