RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 MRPL12P52815 198 aaKnown RBP11.3□□□□□ -0.6
GABPA-201ENST00000354828 TCIRG1Q13488 830 aa11.3□□□□□ -0.6
GABPA-201ENST00000354828 UBA5Q9GZZ9 404 aa11.3□□□□□ -0.6
GABPA-201ENST00000354828 DIP2BQ9P265 1576 aa11.3□□□□□ -0.6
GABPA-201ENST00000354828 HSPA1LP34931 641 aa11.3□□□□□ -0.6
GABPA-201ENST00000354828 RPS8P62241 208 aaKnown RBP11.3□□□□□ -0.6
GABPA-201ENST00000354828 PUM3Q15397 648 aaKnown RBP11.3□□□□□ -0.6
GABPA-201ENST00000354828 ANKRD44Q8N8A2 993 aa11.3□□□□□ -0.6
GABPA-201ENST00000354828 ZNF592Q92610 1267 aa11.3□□□□□ -0.6
GABPA-201ENST00000354828 SMC2O95347 1197 aa11.3□□□□□ -0.6
GABPA-201ENST00000354828 CRKLP46109 303 aaKnown RBP11.3□□□□□ -0.6
GABPA-201ENST00000354828 RAB3GAP1Q15042 981 aa11.3□□□□□ -0.6
GABPA-201ENST00000354828 DLGAP5Q15398 846 aa11.3□□□□□ -0.6
GABPA-201ENST00000354828 GLI2P10070 1586 aa11.3□□□□□ -0.6
GABPA-201ENST00000354828 METAP2P50579 478 aaKnown RBP eCLIP11.3□□□□□ -0.6
GABPA-201ENST00000354828 CKAP2LQ8IYA6 745 aa11.3□□□□□ -0.6
GABPA-201ENST00000354828 ZNF594Q96JF6 807 aaPredicted RBP11.3□□□□□ -0.6
GABPA-201ENST00000354828 NEK1Q96PY6 1258 aa11.3□□□□□ -0.6
GABPA-201ENST00000354828 DACH1Q9UI36 760 aa11.3□□□□□ -0.6
GABPA-201ENST00000354828 MCM5P33992 734 aa11.29□□□□□ -0.6
GABPA-201ENST00000354828 HOOK2Q96ED9 719 aa11.29□□□□□ -0.6
GABPA-201ENST00000354828 CNNM2Q9H8M5 875 aa11.29□□□□□ -0.6
GABPA-201ENST00000354828 TMOD4Q9NZQ9 345 aa11.29□□□□□ -0.6
GABPA-201ENST00000354828 CCDC39Q9UFE4 941 aa11.29□□□□□ -0.6
GABPA-201ENST00000354828 SAP30BPQ9UHR5 308 aaKnown RBP11.29□□□□□ -0.6
GABPA-201ENST00000354828 INSRP06213 1382 aa11.29□□□□□ -0.6
GABPA-201ENST00000354828 IQGAP3Q86VI3 1631 aa11.29□□□□□ -0.6
GABPA-201ENST00000354828 KIF1BO60333 1816 aa11.29□□□□□ -0.6
GABPA-201ENST00000354828 MBD3O95983 291 aa11.29□□□□□ -0.6
GABPA-201ENST00000354828 GNAT2P19087 354 aa11.29□□□□□ -0.6
GABPA-201ENST00000354828 MCMDC2Q4G0Z9 681 aa11.29□□□□□ -0.6
GABPA-201ENST00000354828 SPATA31A3Q5VYP0 1347 aa11.29□□□□□ -0.6
GABPA-201ENST00000354828 MAP3K4Q9Y6R4 1608 aa11.29□□□□□ -0.6
GABPA-201ENST00000354828 DIP2CQ9Y2E4 1556 aa11.29□□□□□ -0.6
GABPA-201ENST00000354828 EIF4A1P60842 406 aaKnown RBP11.29□□□□□ -0.6
GABPA-201ENST00000354828 TIMM10P62072 90 aa11.29□□□□□ -0.6
GABPA-201ENST00000354828 WDR66Q8TBY9 1149 aa11.29□□□□□ -0.6
GABPA-201ENST00000354828 THRAP3Q9Y2W1 955 aaKnown RBP11.29□□□□□ -0.6
GABPA-201ENST00000354828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.28□□□□□ -0.6
GABPA-201ENST00000354828 GOLGA6L1Q8N7Z2 621 aa11.28□□□□□ -0.6
GABPA-201ENST00000354828 SLC26A6Q9BXS9 759 aa11.28□□□□□ -0.6
GABPA-201ENST00000354828 LARP6Q9BRS8 491 aaKnown RBP11.28□□□□□ -0.6
GABPA-201ENST00000354828 SH2D4AQ9H788 454 aa11.28□□□□□ -0.6
GABPA-201ENST00000354828 CHL1O00533 1208 aa11.28□□□□□ -0.6
GABPA-201ENST00000354828 PPFIA3O75145 1194 aa11.28□□□□□ -0.6
GABPA-201ENST00000354828 HMGN5P82970 282 aaKnown RBP11.28□□□□□ -0.6
GABPA-201ENST00000354828 RNF214Q8ND24 703 aa11.28□□□□□ -0.6
GABPA-201ENST00000354828 SH2B1Q9NRF2 756 aaPredicted RBP11.28□□□□□ -0.6
GABPA-201ENST00000354828 A0A1B0GUL7 405 aa11.28□□□□□ -0.6
GABPA-201ENST00000354828 KCNQ3O43525 872 aa11.28□□□□□ -0.6
GABPA-201ENST00000354828 SMARCC2Q8TAQ2 1214 aa11.28□□□□□ -0.6
GABPA-201ENST00000354828 PRR36Q9H6K5 1346 aa11.28□□□□□ -0.6
GABPA-201ENST00000354828 RNF113AO15541 343 aaKnown RBP11.27□□□□□ -0.6
GABPA-201ENST00000354828 PPP1R12BO60237 982 aaPredicted RBP11.27□□□□□ -0.6
GABPA-201ENST00000354828 CAVIN1Q6NZI2 390 aaKnown RBP11.27□□□□□ -0.6
GABPA-201ENST00000354828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.27□□□□□ -0.6
GABPA-201ENST00000354828 CA8P35219 290 aa11.27□□□□□ -0.6
GABPA-201ENST00000354828 GNAQP50148 359 aa11.27□□□□□ -0.6
GABPA-201ENST00000354828 TTLL5Q6EMB2 1281 aa11.27□□□□□ -0.6
GABPA-201ENST00000354828 TMTC2Q8N394 836 aa11.27□□□□□ -0.6
GABPA-201ENST00000354828 DNAI2Q9GZS0 605 aa11.27□□□□□ -0.6
GABPA-201ENST00000354828 TNMDQ9H2S6 317 aa11.27□□□□□ -0.6
GABPA-201ENST00000354828 HMG20BQ9P0W2 317 aa11.27□□□□□ -0.6
GABPA-201ENST00000354828 ADGRL3Q9HAR2 1447 aa11.27□□□□□ -0.6
GABPA-201ENST00000354828 LETM1O95202 739 aaPredicted RBP11.27□□□□□ -0.61
GABPA-201ENST00000354828 GTF2IP78347 998 aa11.27□□□□□ -0.61
GABPA-201ENST00000354828 TRIM5Q9C035 493 aa11.27□□□□□ -0.61
GABPA-201ENST00000354828 HEATR3Q7Z4Q2 680 aa11.26□□□□□ -0.61
GABPA-201ENST00000354828 IL17REQ8NFR9 667 aa11.26□□□□□ -0.61
GABPA-201ENST00000354828 KLHDC4Q8TBB5 520 aa11.26□□□□□ -0.61
GABPA-201ENST00000354828 SMARCE1Q969G3 411 aa11.26□□□□□ -0.61
GABPA-201ENST00000354828 SEPT11Q9NVA2 429 aaKnown RBP11.26□□□□□ -0.61
GABPA-201ENST00000354828 IVNS1ABPQ9Y6Y0 642 aa11.26□□□□□ -0.61
GABPA-201ENST00000354828 AGLP35573 1532 aa11.26□□□□□ -0.61
GABPA-201ENST00000354828 SERPINC1P01008 464 aa11.26□□□□□ -0.61
GABPA-201ENST00000354828 SERPINB2P05120 415 aa11.26□□□□□ -0.61
GABPA-201ENST00000354828 PDIA4P13667 645 aaKnown RBP11.26□□□□□ -0.61
GABPA-201ENST00000354828 TCP10Q12799 353 aa11.26□□□□□ -0.61
GABPA-201ENST00000354828 TTC22Q5TAA0 569 aa11.26□□□□□ -0.61
GABPA-201ENST00000354828 ZNHIT6Q9NWK9 470 aaKnown RBP11.26□□□□□ -0.61
GABPA-201ENST00000354828 ORC3Q9UBD5 711 aaPredicted RBP11.26□□□□□ -0.61
GABPA-201ENST00000354828 JCADQ9P266 1359 aa11.26□□□□□ -0.61
GABPA-201ENST00000354828 KLF18A0A0U1RQI7 1052 aa11.26□□□□□ -0.61
GABPA-201ENST00000354828 PDE1AP54750 535 aa11.26□□□□□ -0.61
GABPA-201ENST00000354828 USP19O94966 1318 aa11.26□□□□□ -0.61
GABPA-201ENST00000354828 ERBB3P21860 1342 aa11.26□□□□□ -0.61
GABPA-201ENST00000354828 ZBTB43O43298 467 aa11.26□□□□□ -0.61
GABPA-201ENST00000354828 GCKRQ14397 625 aa11.26□□□□□ -0.61
GABPA-201ENST00000354828 TTLL7Q6ZT98 887 aa11.26□□□□□ -0.61
GABPA-201ENST00000354828 LIMCH1Q9UPQ0 1083 aa11.26□□□□□ -0.61
GABPA-201ENST00000354828 RNF17Q9BXT8 1623 aaKnown RBP11.26□□□□□ -0.61
GABPA-201ENST00000354828 GIGYF1O75420 1035 aaPredicted RBP11.25□□□□□ -0.61
GABPA-201ENST00000354828 MBD4O95243 580 aa11.25□□□□□ -0.61
GABPA-201ENST00000354828 ZYXQ15942 572 aaKnown RBP11.25□□□□□ -0.61
GABPA-201ENST00000354828 DOK7Q18PE1 504 aa11.25□□□□□ -0.61
GABPA-201ENST00000354828 TCP11L1Q9NUJ3 509 aa11.25□□□□□ -0.61
GABPA-201ENST00000354828 DCPSQ96C86 337 aaKnown RBP11.25□□□□□ -0.61
GABPA-201ENST00000354828 XAGE2Q96GT9 111 aa11.25□□□□□ -0.61
GABPA-201ENST00000354828 GJD4Q96KN9 370 aaPredicted RBP11.25□□□□□ -0.61
GABPA-201ENST00000354828 SULF1Q8IWU6 871 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms