RNA–Protein interactions for RNA: ENST00000354361.3

SYF2-202, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2 BASIC

Gene SYF2, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-202ENST00000354361 TREML1Q86YW5 311 aa6.61□□□□□ -1.35
SYF2-202ENST00000354361 CMTR1Q8N1G2 835 aaKnown RBP6.61□□□□□ -1.35
SYF2-202ENST00000354361 TMEM130Q8N3G9 435 aa6.61□□□□□ -1.35
SYF2-202ENST00000354361 IL22RA1Q8N6P7 574 aa6.61□□□□□ -1.35
SYF2-202ENST00000354361 VRTNQ9H8Y1 702 aa6.61□□□□□ -1.35
SYF2-202ENST00000354361 SMARCA2P51531 1590 aa6.61□□□□□ -1.35
SYF2-202ENST00000354361 SSTR4P31391 388 aa6.6□□□□□ -1.35
SYF2-202ENST00000354361 SETDB1Q15047 1291 aa6.6□□□□□ -1.35
SYF2-202ENST00000354361 TMEM132AQ24JP5 1023 aa6.6□□□□□ -1.35
SYF2-202ENST00000354361 AGGF1Q8N302 714 aaeCLIP6.6□□□□□ -1.35
SYF2-202ENST00000354361 SRA1Q9HD15 236 aaKnown RBP6.6□□□□□ -1.35
SYF2-202ENST00000354361 HOXD8P13378 290 aaPredicted RBP6.59□□□□□ -1.35
SYF2-202ENST00000354361 Q6ZS46 218 aa6.59□□□□□ -1.35
SYF2-202ENST00000354361 SLC51AQ86UW1 340 aa6.59□□□□□ -1.35
SYF2-202ENST00000354361 RBSNQ9H1K0 784 aa6.59□□□□□ -1.35
SYF2-202ENST00000354361 GOLGA2P5Q9HBQ8 144 aa6.59□□□□□ -1.35
SYF2-202ENST00000354361 TRIM33Q9UPN9 1127 aa6.59□□□□□ -1.35
SYF2-202ENST00000354361 KCNMB2Q9Y691 235 aa6.59□□□□□ -1.35
SYF2-202ENST00000354361 PEG3Q9GZU2 1588 aa6.59□□□□□ -1.35
SYF2-202ENST00000354361 BICRAQ9NZM4 1560 aa6.59□□□□□ -1.35
SYF2-202ENST00000354361 GLB1P16278 677 aa6.58□□□□□ -1.36
SYF2-202ENST00000354361 SOX18P35713 384 aa6.58□□□□□ -1.36
SYF2-202ENST00000354361 CD97P48960 835 aa6.58□□□□□ -1.36
SYF2-202ENST00000354361 MAP4K3Q8IVH8 894 aa6.58□□□□□ -1.36
SYF2-202ENST00000354361 DCAF11Q8TEB1 546 aa6.58□□□□□ -1.36
SYF2-202ENST00000354361 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.58□□□□□ -1.36
SYF2-202ENST00000354361 FKBP5Q13451 457 aaPredicted RBP6.57□□□□□ -1.36
SYF2-202ENST00000354361 COX20Q5RI15 118 aa6.57□□□□□ -1.36
SYF2-202ENST00000354361 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.57□□□□□ -1.36
SYF2-202ENST00000354361 PTCD1O75127 700 aaKnown RBP6.56□□□□□ -1.36
SYF2-202ENST00000354361 TRIP4Q15650 581 aaPredicted RBP6.56□□□□□ -1.36
SYF2-202ENST00000354361 ETFBKMTQ8IXQ9 262 aa6.56□□□□□ -1.36
SYF2-202ENST00000354361 FAM200AQ8TCP9 573 aa6.56□□□□□ -1.36
SYF2-202ENST00000354361 KRTAP9-9Q9BYP9 154 aa6.56□□□□□ -1.36
SYF2-202ENST00000354361 KRTAP9-4Q9BYQ2 154 aa6.56□□□□□ -1.36
SYF2-202ENST00000354361 RAXQ9Y2V3 346 aa6.56□□□□□ -1.36
SYF2-202ENST00000354361 BAZ1BQ9UIG0 1483 aaKnown RBP6.55□□□□□ -1.36
SYF2-202ENST00000354361 BTBD11A6QL63 1104 aa6.55□□□□□ -1.36
SYF2-202ENST00000354361 NLRP13Q86W25 1043 aa6.55□□□□□ -1.36
SYF2-202ENST00000354361 GALNT11Q8NCW6 608 aa6.55□□□□□ -1.36
SYF2-202ENST00000354361 UBL7Q96S82 380 aaPredicted RBP6.55□□□□□ -1.36
SYF2-202ENST00000354361 PPME1Q9Y570 386 aa6.55□□□□□ -1.36
SYF2-202ENST00000354361 COL17A1Q9UMD9 1497 aaPredicted RBP6.54□□□□□ -1.36
SYF2-202ENST00000354361 EEA1Q15075 1411 aa6.54□□□□□ -1.36
SYF2-202ENST00000354361 GSC2O15499 205 aa6.54□□□□□ -1.36
SYF2-202ENST00000354361 WISP1O95388 367 aa6.54□□□□□ -1.36
SYF2-202ENST00000354361 TGFB1P01137 390 aa6.54□□□□□ -1.36
SYF2-202ENST00000354361 IGLV1-40P01703 118 aa6.54□□□□□ -1.36
SYF2-202ENST00000354361 CDCA8Q53HL2 280 aa6.54□□□□□ -1.36
SYF2-202ENST00000354361 CFAP70Q5T0N1 1121 aa6.54□□□□□ -1.36
SYF2-202ENST00000354361 CACTIN-AS1Q8N1I8 211 aa6.54□□□□□ -1.36
SYF2-202ENST00000354361 MUC3BQ9H195 1237 aa6.54□□□□□ -1.36
SYF2-202ENST00000354361 STOML1Q9UBI4 398 aa6.54□□□□□ -1.36
SYF2-202ENST00000354361 CCDC88BA6NC98 1476 aa6.53□□□□□ -1.36
SYF2-202ENST00000354361 A6NJR5 290 aa6.53□□□□□ -1.36
SYF2-202ENST00000354361 LINC01387J3KSC0 135 aa6.53□□□□□ -1.36
SYF2-202ENST00000354361 MED26O95402 600 aa6.53□□□□□ -1.36
SYF2-202ENST00000354361 ATP11AP98196 1134 aa6.53□□□□□ -1.36
SYF2-202ENST00000354361 TXNDC11Q6PKC3 985 aa6.53□□□□□ -1.36
SYF2-202ENST00000354361 ACAD11Q709F0 780 aa6.53□□□□□ -1.36
SYF2-202ENST00000354361 PRIMPOLQ96LW4 560 aa6.53□□□□□ -1.36
SYF2-202ENST00000354361 SAP130Q9H0E3 1048 aa6.53□□□□□ -1.36
SYF2-202ENST00000354361 NOVA2Q9UNW9 492 aaKnown RBP6.53□□□□□ -1.36
SYF2-202ENST00000354361 ATAD2BQ9ULI0 1458 aa6.53□□□□□ -1.36
SYF2-202ENST00000354361 KIAA1324LA8MWY0 1029 aaPredicted RBP6.52□□□□□ -1.37
SYF2-202ENST00000354361 UBAP1LF5GYI3 381 aa6.52□□□□□ -1.37
SYF2-202ENST00000354361 DHX15O43143 795 aaKnown RBP6.52□□□□□ -1.37
SYF2-202ENST00000354361 PAX4O43316 350 aa6.52□□□□□ -1.37
SYF2-202ENST00000354361 COBLO75128 1261 aa6.52□□□□□ -1.37
SYF2-202ENST00000354361 RFX1P22670 979 aa6.52□□□□□ -1.37
SYF2-202ENST00000354361 IRAK1P51617 712 aa6.52□□□□□ -1.37
SYF2-202ENST00000354361 FAM26DQ5JW98 314 aa6.52□□□□□ -1.37
SYF2-202ENST00000354361 COL13A1Q5TAT6 717 aaPredicted RBP6.52□□□□□ -1.37
SYF2-202ENST00000354361 ARMC10Q8N2F6 343 aa6.52□□□□□ -1.37
SYF2-202ENST00000354361 OR13H1Q8NG92 308 aa6.52□□□□□ -1.37
SYF2-202ENST00000354361 LACRTQ9GZZ8 138 aa6.52□□□□□ -1.37
SYF2-202ENST00000354361 ZNF777Q9ULD5 760 aaPredicted RBP6.52□□□□□ -1.37
SYF2-202ENST00000354361 PRMT3O60678 531 aa6.51□□□□□ -1.37
SYF2-202ENST00000354361 BRD2P25440 801 aaKnown RBP6.51□□□□□ -1.37
SYF2-202ENST00000354361 CD68P34810 354 aaPredicted RBP6.51□□□□□ -1.37
SYF2-202ENST00000354361 CEP135Q66GS9 1140 aa6.51□□□□□ -1.37
SYF2-202ENST00000354361 C16orf46Q6P387 395 aa6.51□□□□□ -1.37
SYF2-202ENST00000354361 UTP4Q969X6 686 aaKnown RBP6.51□□□□□ -1.37
SYF2-202ENST00000354361 CARD10Q9BWT7 1032 aa6.51□□□□□ -1.37
SYF2-202ENST00000354361 CEP41Q9BYV8 373 aa6.51□□□□□ -1.37
SYF2-202ENST00000354361 KCNK4Q9NYG8 393 aa6.51□□□□□ -1.37
SYF2-202ENST00000354361 OAS3Q9Y6K5 1087 aaKnown RBP6.51□□□□□ -1.37
SYF2-202ENST00000354361 CDC25BP30305 580 aa6.5□□□□□ -1.37
SYF2-202ENST00000354361 GP2P55259 537 aaKnown RBP6.5□□□□□ -1.37
SYF2-202ENST00000354361 NFIAQ12857 509 aa6.5□□□□□ -1.37
SYF2-202ENST00000354361 HYAL2Q12891 473 aa6.5□□□□□ -1.37
SYF2-202ENST00000354361 OCLNQ16625 522 aa6.5□□□□□ -1.37
SYF2-202ENST00000354361 SWI5Q1ZZU3 235 aa6.5□□□□□ -1.37
SYF2-202ENST00000354361 ZDHHC13Q8IUH4 622 aa6.5□□□□□ -1.37
SYF2-202ENST00000354361 SPACA7Q96KW9 195 aa6.5□□□□□ -1.37
SYF2-202ENST00000354361 ACIN1Q9UKV3 1341 aaKnown RBP6.5□□□□□ -1.37
SYF2-202ENST00000354361 NCAPD3P42695 1498 aa6.49□□□□□ -1.37
SYF2-202ENST00000354361 TNFRSF10BO14763 440 aa6.49□□□□□ -1.37
SYF2-202ENST00000354361 TM4SF5O14894 197 aa6.49□□□□□ -1.37
SYF2-202ENST00000354361 SMNDC1O75940 238 aaKnown RBP eCLIP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms