RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 EHBP1L1Q8N3D4 1523 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 PHLPP2Q6ZVD8 1323 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 ARHGAP6O43182 974 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 TACC1O75410 805 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 GCFC2P16383 781 aaKnown RBP5.73□□□□□ -1.49
SKP1-202ENST00000353411 HNRNPMP52272 730 aaKnown RBP eCLIP5.73□□□□□ -1.491e-11■■■■□ 25
SKP1-202ENST00000353411 AIMP1Q12904 312 aaKnown RBP5.73□□□□□ -1.49
SKP1-202ENST00000353411 ARMC9Q7Z3E5 817 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 LRRC8AQ8IWT6 810 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 CALR3Q96L12 384 aaKnown RBP5.73□□□□□ -1.49
SKP1-202ENST00000353411 CCDC113Q9H0I3 377 aa5.73□□□□□ -1.49
SKP1-202ENST00000353411 ABCC11Q96J66 1382 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 PSMD7P51665 324 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 G3BP1Q13283 466 aaKnown RBP eCLIP5.72□□□□□ -1.49
SKP1-202ENST00000353411 CFAP58Q5T655 872 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 RMDN2Q96LZ7 410 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 BAIAP2L1Q9UHR4 511 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 KIAA1107Q9UPP5 1409 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 GIGYF1O75420 1035 aaPredicted RBP5.72□□□□□ -1.49
SKP1-202ENST00000353411 SETDB1Q15047 1291 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 FERMT3Q86UX7 667 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 USH1CQ9Y6N9 552 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 KRT86O43790 486 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 CLCN6P51797 869 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 BAG1Q99933 345 aaPredicted RBP5.72□□□□□ -1.49
SKP1-202ENST00000353411 ANAPC4Q9UJX5 808 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 ADAM21Q9UKJ8 722 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 MRFAP1Q9Y605 127 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 PPFIA2O75334 1257 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 UBTFL1P0CB47 393 aaPredicted RBP5.72□□□□□ -1.49
SKP1-202ENST00000353411 KANK3Q6NY19 840 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 RAB3IPQ96QF0 476 aaPredicted RBP5.72□□□□□ -1.49
SKP1-202ENST00000353411 CWC25Q9NXE8 425 aaPredicted RBP5.72□□□□□ -1.49
SKP1-202ENST00000353411 CEP131Q9UPN4 1083 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 HIP1RO75146 1068 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 KRT83P78385 493 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 CRYMQ14894 314 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 ATL3Q6DD88 541 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 AOPEPQ8N6M6 819 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 PIK3R5Q8WYR1 880 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 DDX12PQ92771 950 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 PSD3Q9NYI0 1048 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.72□□□□□ -1.49
SKP1-202ENST00000353411 PUF60Q9UHX1 559 aaKnown RBP5.72□□□□□ -1.49
SKP1-202ENST00000353411 PCDHB15Q9Y5E8 787 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 SLFN14P0C7P3 912 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 CETN3O15182 167 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 ETF1P62495 437 aaKnown RBP5.72□□□□□ -1.49
SKP1-202ENST00000353411 FAM204AQ9H8W3 233 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 PDE11AQ9HCR9 933 aa5.72□□□□□ -1.49
SKP1-202ENST00000353411 TTF2Q9UNY4 1162 aaKnown RBP5.72□□□□□ -1.49
SKP1-202ENST00000353411 SF3B2Q13435 895 aaKnown RBP5.71□□□□□ -1.49
SKP1-202ENST00000353411 NFXL1Q6ZNB6 911 aa5.71□□□□□ -1.49
SKP1-202ENST00000353411 RUFY4Q6ZNE9 571 aa5.71□□□□□ -1.49
SKP1-202ENST00000353411 STMN2Q93045 179 aa5.71□□□□□ -1.49
SKP1-202ENST00000353411 NAPGQ99747 312 aaPredicted RBP5.71□□□□□ -1.49
SKP1-202ENST00000353411 PPP1R12CQ9BZL4 782 aa5.71□□□□□ -1.49
SKP1-202ENST00000353411 ERICH2A1L162 156 aa5.71□□□□□ -1.49
SKP1-202ENST00000353411 ANKRD62A6NC57 917 aa5.71□□□□□ -1.49
SKP1-202ENST00000353411 ELF1P32519 619 aa5.71□□□□□ -1.49
SKP1-202ENST00000353411 EIF4G3O43432 1585 aaKnown RBP5.71□□□□□ -1.49
SKP1-202ENST00000353411 KIF14Q15058 1648 aa5.71□□□□□ -1.49
SKP1-202ENST00000353411 CTIFO43310 598 aaKnown RBP5.71□□□□□ -1.49
SKP1-202ENST00000353411 CCT5P48643 541 aa5.71□□□□□ -1.49
SKP1-202ENST00000353411 PHLDB2Q86SQ0 1253 aa5.71□□□□□ -1.49
SKP1-202ENST00000353411 PNMA8AQ86V59 439 aaPredicted RBP5.71□□□□□ -1.49
SKP1-202ENST00000353411 FSD1Q9BTV5 496 aa5.71□□□□□ -1.49
SKP1-202ENST00000353411 CROCCP2Q86T23 111 aa5.71□□□□□ -1.5
SKP1-202ENST00000353411 RASEFQ8IZ41 740 aa5.71□□□□□ -1.5
SKP1-202ENST00000353411 CYLC1P35663 651 aaPredicted RBP5.71□□□□□ -1.5
SKP1-202ENST00000353411 RAB11FIP4Q86YS3 637 aa5.71□□□□□ -1.5
SKP1-202ENST00000353411 TCP11Q8WWU5 503 aa5.71□□□□□ -1.5
SKP1-202ENST00000353411 NAP1L3Q99457 506 aaPredicted RBP5.71□□□□□ -1.5
SKP1-202ENST00000353411 C9orf78Q9NZ63 289 aaPredicted RBP5.71□□□□□ -1.5
SKP1-202ENST00000353411 RPRD2Q5VT52 1461 aaKnown RBP5.71□□□□□ -1.5
SKP1-202ENST00000353411 ARHGAP5Q13017 1502 aa5.71□□□□□ -1.5
SKP1-202ENST00000353411 TRIM27P14373 513 aa5.71□□□□□ -1.5
SKP1-202ENST00000353411 RASSF2P50749 326 aa5.71□□□□□ -1.5
SKP1-202ENST00000353411 GPT2Q8TD30 523 aa5.71□□□□□ -1.5
SKP1-202ENST00000353411 TSGA10Q9BZW7 698 aa5.71□□□□□ -1.5
SKP1-202ENST00000353411 PTPN23Q9H3S7 1636 aa5.71□□□□□ -1.5
SKP1-202ENST00000353411 PARD3Q8TEW0 1356 aa5.71□□□□□ -1.5
SKP1-202ENST00000353411 NAIPQ13075 1403 aa5.71□□□□□ -1.5
SKP1-202ENST00000353411 APBA1Q02410 837 aa5.71□□□□□ -1.5
SKP1-202ENST00000353411 SEC62Q99442 399 aaKnown RBP5.71□□□□□ -1.5
SKP1-202ENST00000353411 DNM1Q05193 864 aaKnown RBP5.71□□□□□ -1.5
SKP1-202ENST00000353411 STK3Q13188 491 aa5.71□□□□□ -1.5
SKP1-202ENST00000353411 ZNF569Q5MCW4 686 aa5.71□□□□□ -1.5
SKP1-202ENST00000353411 CNGA4Q8IV77 575 aa5.71□□□□□ -1.5
SKP1-202ENST00000353411 ANKRD13AQ8IZ07 590 aa5.71□□□□□ -1.5
SKP1-202ENST00000353411 CBX8Q9HC52 389 aa5.71□□□□□ -1.5
SKP1-202ENST00000353411 TPX2Q9ULW0 747 aaKnown RBP5.71□□□□□ -1.5
SKP1-202ENST00000353411 SEPT2Q15019 361 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 TWISTNBQ3B726 338 aaPredicted RBP5.7□□□□□ -1.5
SKP1-202ENST00000353411 FCHSD1Q86WN1 690 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 KCNG4Q8TDN1 519 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 RABGAP1Q9Y3P9 1069 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 FRMD3A2A2Y4 597 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 PRPHP41219 470 aa5.7□□□□□ -1.5
SKP1-202ENST00000353411 GNGT1P63211 74 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms