RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 PREX1Q8TCU6 1659 aa17.85■□□□□ 0.45
LMNA-201ENST00000347559 CHD1O14646 1710 aa17.84■□□□□ 0.45
LMNA-201ENST00000347559 MAP3K5Q99683 1374 aa17.84■□□□□ 0.45
LMNA-201ENST00000347559 EFCAB8A8MWE9 144 aa17.84■□□□□ 0.45
LMNA-201ENST00000347559 ZSCAN16Q9H4T2 348 aaPredicted RBP17.84■□□□□ 0.45
LMNA-201ENST00000347559 CPS1P31327 1500 aa17.84■□□□□ 0.45
LMNA-201ENST00000347559 FANCGO15287 622 aa17.84■□□□□ 0.45
LMNA-201ENST00000347559 LRRFIP1Q32MZ4 808 aaKnown RBP17.84■□□□□ 0.45
LMNA-201ENST00000347559 CCDC158Q5M9N0 1113 aa17.84■□□□□ 0.45
LMNA-201ENST00000347559 SRLQ86TD4 932 aa17.84■□□□□ 0.45
LMNA-201ENST00000347559 REXO1L1PQ8IX06 675 aa17.84■□□□□ 0.45
LMNA-201ENST00000347559 CCDC8Q9H0W5 538 aaPredicted RBP17.84■□□□□ 0.45
LMNA-201ENST00000347559 BOLA2Q9H3K6 86 aa17.84■□□□□ 0.45
LMNA-201ENST00000347559 RGS22Q8NE09 1264 aa17.83■□□□□ 0.45
LMNA-201ENST00000347559 ARHGEF10O15013 1369 aa17.83■□□□□ 0.44
LMNA-201ENST00000347559 CLTCQ00610 1675 aaKnown RBP17.83■□□□□ 0.44
LMNA-201ENST00000347559 TXNDC2Q86VQ3 553 aa17.83■□□□□ 0.44
LMNA-201ENST00000347559 FBXO18Q8NFZ0 1043 aa17.83■□□□□ 0.44
LMNA-201ENST00000347559 GIGYF1O75420 1035 aaPredicted RBP17.83■□□□□ 0.44
LMNA-201ENST00000347559 GOLGA5Q8TBA6 731 aa17.83■□□□□ 0.44
LMNA-201ENST00000347559 PHLPP2Q6ZVD8 1323 aa17.82■□□□□ 0.44
LMNA-201ENST00000347559 ANXA1P04083 346 aa17.82■□□□□ 0.44
LMNA-201ENST00000347559 FBXO31Q5XUX0 539 aaPredicted RBP17.82■□□□□ 0.44
LMNA-201ENST00000347559 TRIM65Q6PJ69 517 aa17.82■□□□□ 0.44
LMNA-201ENST00000347559 Q6ZUG5 572 aa17.82■□□□□ 0.44
LMNA-201ENST00000347559 RCOR1Q9UKL0 485 aa17.82■□□□□ 0.44
LMNA-201ENST00000347559 CCDC61Q9Y6R9 512 aa17.82■□□□□ 0.44
LMNA-201ENST00000347559 ANKRD65E5RJM6 399 aa17.82■□□□□ 0.44
LMNA-201ENST00000347559 TPM1P09493 284 aa17.82■□□□□ 0.44
LMNA-201ENST00000347559 SRRTQ9BXP5 876 aaKnown RBP17.82■□□□□ 0.44
LMNA-201ENST00000347559 PARP3Q9Y6F1 533 aa17.82■□□□□ 0.44
LMNA-201ENST00000347559 SIGLEC1Q9BZZ2 1709 aa17.82■□□□□ 0.44
LMNA-201ENST00000347559 MCM6Q14566 821 aa17.81■□□□□ 0.44
LMNA-201ENST00000347559 LEKR1Q6ZMV7 388 aa17.81■□□□□ 0.44
LMNA-201ENST00000347559 ZNF589Q86UQ0 364 aaPredicted RBP17.81■□□□□ 0.44
LMNA-201ENST00000347559 GOLGA6L1Q8N7Z2 621 aa17.81■□□□□ 0.44
LMNA-201ENST00000347559 PARD6BQ9BYG5 372 aa17.81■□□□□ 0.44
LMNA-201ENST00000347559 H3BQF6 201 aa17.81■□□□□ 0.44
LMNA-201ENST00000347559 ADD1P35611 737 aaKnown RBP17.81■□□□□ 0.44
LMNA-201ENST00000347559 GNG11P61952 73 aa17.81■□□□□ 0.44
LMNA-201ENST00000347559 VPS18Q9P253 973 aa17.81■□□□□ 0.44
LMNA-201ENST00000347559 PI4KAP2A4QPH2 592 aa17.81■□□□□ 0.44
LMNA-201ENST00000347559 ATP1A3P13637 1013 aa17.81■□□□□ 0.44
LMNA-201ENST00000347559 PI4KAP1Q8N8J0 262 aa17.81■□□□□ 0.44
LMNA-201ENST00000347559 ENGASEQ8NFI3 743 aa17.81■□□□□ 0.44
LMNA-201ENST00000347559 UBXN6Q9BZV1 441 aa17.81■□□□□ 0.44
LMNA-201ENST00000347559 ADGRL3Q9HAR2 1447 aa17.8■□□□□ 0.44
LMNA-201ENST00000347559 PIK3C2BO00750 1634 aa17.8■□□□□ 0.44
LMNA-201ENST00000347559 ATP8B1O43520 1251 aa17.8■□□□□ 0.44
LMNA-201ENST00000347559 CCT2P78371 535 aaKnown RBP17.8■□□□□ 0.44
LMNA-201ENST00000347559 PPP2R3AQ06190 1150 aa17.8■□□□□ 0.44
LMNA-201ENST00000347559 SF3A1Q15459 793 aaKnown RBP17.8■□□□□ 0.44
LMNA-201ENST00000347559 SEC62Q99442 399 aaKnown RBP17.8■□□□□ 0.44
LMNA-201ENST00000347559 CCP110O43303 1012 aa17.79■□□□□ 0.44
LMNA-201ENST00000347559 RAPGEF3O95398 923 aa17.79■□□□□ 0.44
LMNA-201ENST00000347559 ACTN2P35609 894 aa17.79■□□□□ 0.44
LMNA-201ENST00000347559 ICE2Q659A1 982 aa17.79■□□□□ 0.44
LMNA-201ENST00000347559 FUT8Q9BYC5 575 aa17.79■□□□□ 0.44
LMNA-201ENST00000347559 TAOK2Q9UL54 1235 aa17.79■□□□□ 0.44
LMNA-201ENST00000347559 TUBB4AP04350 444 aa17.79■□□□□ 0.44
LMNA-201ENST00000347559 FANCCQ00597 558 aa17.79■□□□□ 0.44
LMNA-201ENST00000347559 GPR161Q8N6U8 529 aaKnown RBP17.79■□□□□ 0.44
LMNA-201ENST00000347559 EDC3Q96F86 508 aaKnown RBP17.79■□□□□ 0.44
LMNA-201ENST00000347559 LOC102724159A0A0B4J2E5 919 aa17.78■□□□□ 0.44
LMNA-201ENST00000347559 SERPINC1P01008 464 aa17.78■□□□□ 0.44
LMNA-201ENST00000347559 NDUFA8P51970 172 aa17.78■□□□□ 0.44
LMNA-201ENST00000347559 SCRN1Q12765 414 aa17.78■□□□□ 0.44
LMNA-201ENST00000347559 PWP2Q15269 919 aaKnown RBP17.78■□□□□ 0.44
LMNA-201ENST00000347559 FOXR1Q6PIV2 292 aa17.78■□□□□ 0.44
LMNA-201ENST00000347559 MRPS27Q92552 414 aaKnown RBP17.78■□□□□ 0.44
LMNA-201ENST00000347559 EXOC4Q96A65 974 aa17.78■□□□□ 0.44
LMNA-201ENST00000347559 NEK1Q96PY6 1258 aa17.78■□□□□ 0.44
LMNA-201ENST00000347559 WDR24Q96S15 920 aa17.78■□□□□ 0.44
LMNA-201ENST00000347559 ATG3Q9NT62 314 aa17.78■□□□□ 0.44
LMNA-201ENST00000347559 HECW2Q9P2P5 1572 aa17.78■□□□□ 0.44
LMNA-201ENST00000347559 SKIDA1Q1XH10 827 aa17.78■□□□□ 0.44
LMNA-201ENST00000347559 CFAP100Q494V2 611 aa17.78■□□□□ 0.44
LMNA-201ENST00000347559 DRC1Q96MC2 740 aa17.78■□□□□ 0.44
LMNA-201ENST00000347559 ZNF396Q96N95 335 aaPredicted RBP17.78■□□□□ 0.44
LMNA-201ENST00000347559 KIAA1468Q9P260 1216 aa17.78■□□□□ 0.44
LMNA-201ENST00000347559 PCDHA7Q9UN72 937 aa17.78■□□□□ 0.44
LMNA-201ENST00000347559 LONRF2Q1L5Z9 754 aa17.78■□□□□ 0.44
LMNA-201ENST00000347559 NUTM2GQ5VZR2 741 aa17.78■□□□□ 0.44
LMNA-201ENST00000347559 USP42Q9H9J4 1324 aaKnown RBP17.77■□□□□ 0.44
LMNA-201ENST00000347559 TLR7Q9NYK1 1049 aaKnown RBP17.77■□□□□ 0.44
LMNA-201ENST00000347559 HIP1O00291 1037 aa17.77■□□□□ 0.43
LMNA-201ENST00000347559 HSP90AA4PQ58FG1 418 aa17.77■□□□□ 0.43
LMNA-201ENST00000347559 NOM1Q5C9Z4 860 aaKnown RBP17.77■□□□□ 0.43
LMNA-201ENST00000347559 NCOA5Q9HCD5 579 aaKnown RBP17.77■□□□□ 0.43
LMNA-201ENST00000347559 PDE11AQ9HCR9 933 aa17.77■□□□□ 0.43
LMNA-201ENST00000347559 C9orf78Q9NZ63 289 aaPredicted RBP17.77■□□□□ 0.43
LMNA-201ENST00000347559 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.77■□□□□ 0.43
LMNA-201ENST00000347559 UBASH3AP57075 661 aa17.76■□□□□ 0.43
LMNA-201ENST00000347559 PDILTQ8N807 584 aa17.76■□□□□ 0.43
LMNA-201ENST00000347559 DNAAF4Q8WXU2 420 aa17.76■□□□□ 0.43
LMNA-201ENST00000347559 DPF2Q92785 391 aa17.76■□□□□ 0.43
LMNA-201ENST00000347559 SLC3A2P08195 630 aaKnown RBP17.76■□□□□ 0.43
LMNA-201ENST00000347559 TTC31Q49AM3 519 aaPredicted RBP17.76■□□□□ 0.43
LMNA-201ENST00000347559 FMR1NBQ8N0W7 255 aaPredicted RBP17.76■□□□□ 0.43
LMNA-201ENST00000347559 PTPDC1A2A3K4 754 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms