RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 GTF3C6Q969F1 213 aa25.43■■□□□ 1.66
CCDC38-201ENST00000344280 CCDC85AQ96PX6 553 aaPredicted RBP25.43■■□□□ 1.66
CCDC38-201ENST00000344280 EVA1CP58658 441 aa25.42■■□□□ 1.66
CCDC38-201ENST00000344280 PDCP20941 246 aa25.42■■□□□ 1.66
CCDC38-201ENST00000344280 ISCA1Q9BUE6 129 aa25.42■■□□□ 1.66
CCDC38-201ENST00000344280 ASAP1Q9ULH1 1129 aa25.42■■□□□ 1.66
CCDC38-201ENST00000344280 TOGARAM1Q9Y4F4 1720 aa25.41■■□□□ 1.66
CCDC38-201ENST00000344280 CSPP1Q1MSJ5 1256 aa25.41■■□□□ 1.66
CCDC38-201ENST00000344280 BRF1Q92994 677 aa25.4■■□□□ 1.66
CCDC38-201ENST00000344280 FUCA2Q9BTY2 467 aa25.4■■□□□ 1.66
CCDC38-201ENST00000344280 KRT85P78386 507 aa25.4■■□□□ 1.66
CCDC38-201ENST00000344280 TMOD3Q9NYL9 352 aa25.4■■□□□ 1.66
CCDC38-201ENST00000344280 ABCA3Q99758 1704 aa25.4■■□□□ 1.66
CCDC38-201ENST00000344280 LETM1O95202 739 aaPredicted RBP25.39■■□□□ 1.66
CCDC38-201ENST00000344280 IFIT1P09914 478 aaKnown RBP25.39■■□□□ 1.66
CCDC38-201ENST00000344280 TCIRG1Q13488 830 aa25.39■■□□□ 1.66
CCDC38-201ENST00000344280 ZMYM1Q5SVZ6 1142 aa25.39■■□□□ 1.66
CCDC38-201ENST00000344280 DNAJC10Q8IXB1 793 aa25.39■■□□□ 1.66
CCDC38-201ENST00000344280 TFIP11Q9UBB9 837 aaKnown RBP25.39■■□□□ 1.66
CCDC38-201ENST00000344280 USP25Q9UHP3 1055 aa25.39■■□□□ 1.66
CCDC38-201ENST00000344280 ZKSCAN5Q9Y2L8 839 aa25.39■■□□□ 1.66
CCDC38-201ENST00000344280 HSP90B1P14625 803 aaKnown RBP25.39■■□□□ 1.65
CCDC38-201ENST00000344280 FAM89AQ96GI7 184 aa25.39■■□□□ 1.65
CCDC38-201ENST00000344280 HELLSQ9NRZ9 838 aa25.39■■□□□ 1.65
CCDC38-201ENST00000344280 CIAO1O76071 339 aa25.38■■□□□ 1.65
CCDC38-201ENST00000344280 SCRN1Q12765 414 aa25.38■■□□□ 1.65
CCDC38-201ENST00000344280 FAM184AQ8NB25 1140 aa25.38■■□□□ 1.65
CCDC38-201ENST00000344280 PIGBQ92521 554 aa25.38■■□□□ 1.65
CCDC38-201ENST00000344280 ADORA1P30542 326 aa25.38■■□□□ 1.65
CCDC38-201ENST00000344280 SYNE4Q8N205 404 aa25.38■■□□□ 1.65
CCDC38-201ENST00000344280 DDX11Q96FC9 970 aa25.38■■□□□ 1.65
CCDC38-201ENST00000344280 ATG3Q9NT62 314 aa25.38■■□□□ 1.65
CCDC38-201ENST00000344280 MAST3O60307 1309 aa25.37■■□□□ 1.65
CCDC38-201ENST00000344280 HSPD1P10809 573 aaKnown RBP25.37■■□□□ 1.65
CCDC38-201ENST00000344280 MPNDQ8N594 471 aa25.37■■□□□ 1.65
CCDC38-201ENST00000344280 CCDC39Q9UFE4 941 aa25.37■■□□□ 1.65
CCDC38-201ENST00000344280 LIG1P18858 919 aa25.37■■□□□ 1.65
CCDC38-201ENST00000344280 M0R2C6 588 aa25.36■■□□□ 1.65
CCDC38-201ENST00000344280 CCDC57Q2TAC2 916 aa25.36■■□□□ 1.65
CCDC38-201ENST00000344280 DSCC1Q9BVC3 393 aa25.36■■□□□ 1.65
CCDC38-201ENST00000344280 LAMA4Q16363 1823 aa25.36■■□□□ 1.65
CCDC38-201ENST00000344280 ZNF500O60304 480 aaPredicted RBP25.35■■□□□ 1.65
CCDC38-201ENST00000344280 PDIA4P13667 645 aaKnown RBP25.35■■□□□ 1.65
CCDC38-201ENST00000344280 FKBP4Q02790 459 aaKnown RBP eCLIP25.35■■□□□ 1.65
CCDC38-201ENST00000344280 CEP126Q9P2H0 1117 aa25.35■■□□□ 1.65
CCDC38-201ENST00000344280 RNF113AO15541 343 aaKnown RBP25.35■■□□□ 1.65
CCDC38-201ENST00000344280 UVSSAQ2YD98 709 aa25.35■■□□□ 1.65
CCDC38-201ENST00000344280 OFD1O75665 1012 aa25.34■■□□□ 1.65
CCDC38-201ENST00000344280 FGD1P98174 961 aa25.34■■□□□ 1.65
CCDC38-201ENST00000344280 TTLL5Q6EMB2 1281 aa25.34■■□□□ 1.65
CCDC38-201ENST00000344280 DHX32Q7L7V1 743 aaKnown RBP25.34■■□□□ 1.65
CCDC38-201ENST00000344280 OSBP2Q969R2 916 aa25.34■■□□□ 1.65
CCDC38-201ENST00000344280 ELP1O95163 1332 aa25.34■■□□□ 1.65
CCDC38-201ENST00000344280 STRCQ7RTU9 1775 aa25.34■■□□□ 1.65
CCDC38-201ENST00000344280 APOBRQ0VD83 1088 aa25.34■■□□□ 1.65
CCDC38-201ENST00000344280 SCARF1Q14162 830 aa25.33■■□□□ 1.65
CCDC38-201ENST00000344280 CHST3Q7LGC8 479 aa25.33■■□□□ 1.65
CCDC38-201ENST00000344280 XAGE2Q96GT9 111 aa25.33■■□□□ 1.65
CCDC38-201ENST00000344280 E7EWF7 191 aa25.33■■□□□ 1.64
CCDC38-201ENST00000344280 CAMK4Q16566 473 aa25.33■■□□□ 1.64
CCDC38-201ENST00000344280 LEO1Q8WVC0 666 aaPredicted RBP25.33■■□□□ 1.64
CCDC38-201ENST00000344280 SPATA32Q96LK8 384 aa25.33■■□□□ 1.64
CCDC38-201ENST00000344280 PPFIA3O75145 1194 aa25.32■■□□□ 1.64
CCDC38-201ENST00000344280 ADCY5O95622 1261 aa25.32■■□□□ 1.64
CCDC38-201ENST00000344280 PTMAP06454 111 aaKnown RBP25.32■■□□□ 1.64
CCDC38-201ENST00000344280 EXOSC10Q01780 885 aaKnown RBP25.32■■□□□ 1.64
CCDC38-201ENST00000344280 HLFQ16534 295 aa25.32■■□□□ 1.64
CCDC38-201ENST00000344280 CTDNEP1O95476 244 aa25.32■■□□□ 1.64
CCDC38-201ENST00000344280 RESTQ13127 1097 aa25.32■■□□□ 1.64
CCDC38-201ENST00000344280 TRIM28Q13263 835 aaKnown RBP25.32■■□□□ 1.64
CCDC38-201ENST00000344280 PFKFB2O60825 505 aa25.31■■□□□ 1.64
CCDC38-201ENST00000344280 PCCAP05165 728 aaPredicted RBP25.31■■□□□ 1.64
CCDC38-201ENST00000344280 PI16Q6UXB8 463 aa25.31■■□□□ 1.64
CCDC38-201ENST00000344280 GPTP24298 496 aa25.3■■□□□ 1.64
CCDC38-201ENST00000344280 KIF6Q6ZMV9 814 aa25.3■■□□□ 1.64
CCDC38-201ENST00000344280 SMARCC2Q8TAQ2 1214 aa25.3■■□□□ 1.64
CCDC38-201ENST00000344280 SCAND2PQ9GZW5 306 aaPredicted RBP25.3■■□□□ 1.64
CCDC38-201ENST00000344280 BTG4Q9NY30 223 aa25.3■■□□□ 1.64
CCDC38-201ENST00000344280 FOXP2O15409 715 aa25.3■■□□□ 1.64
CCDC38-201ENST00000344280 AP5Z1O43299 807 aa25.3■■□□□ 1.64
CCDC38-201ENST00000344280 HMGB1P09429 215 aaKnown RBP25.3■■□□□ 1.64
CCDC38-201ENST00000344280 FOSBP53539 338 aa25.3■■□□□ 1.64
CCDC38-201ENST00000344280 CCT2P78371 535 aaKnown RBP25.3■■□□□ 1.64
CCDC38-201ENST00000344280 ZBTB38Q8NAP3 1195 aaPredicted RBP25.3■■□□□ 1.64
CCDC38-201ENST00000344280 NSUN7Q8NE18 718 aaKnown RBP25.3■■□□□ 1.64
CCDC38-201ENST00000344280 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.3■■□□□ 1.64
CCDC38-201ENST00000344280 HSP90AB3PQ58FF7 597 aa25.29■■□□□ 1.64
CCDC38-201ENST00000344280 TTC39AQ5SRH9 613 aa25.29■■□□□ 1.64
CCDC38-201ENST00000344280 GORABQ5T7V8 394 aa25.29■■□□□ 1.64
CCDC38-201ENST00000344280 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.29■■□□□ 1.64
CCDC38-201ENST00000344280 NCOA5Q9HCD5 579 aaKnown RBP25.29■■□□□ 1.64
CCDC38-201ENST00000344280 DACT1Q9NYF0 836 aa25.29■■□□□ 1.64
CCDC38-201ENST00000344280 CSF1RP07333 972 aa25.29■■□□□ 1.64
CCDC38-201ENST00000344280 CCDC158Q5M9N0 1113 aa25.29■■□□□ 1.64
CCDC38-201ENST00000344280 PGBD1Q96JS3 809 aa25.29■■□□□ 1.64
CCDC38-201ENST00000344280 ZNF830Q96NB3 372 aaPredicted RBP25.29■■□□□ 1.64
CCDC38-201ENST00000344280 SLC4A9Q96Q91 983 aa25.29■■□□□ 1.64
CCDC38-201ENST00000344280 AGXT2Q9BYV1 514 aa25.29■■□□□ 1.64
CCDC38-201ENST00000344280 H3BQV1 296 aa25.28■■□□□ 1.64
CCDC38-201ENST00000344280 KDM4AO75164 1064 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms