RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 NECTIN2Q92692 538 aa23.36■■□□□ 1.33
MUC1-204ENST00000343256 GCC1Q96CN9 775 aa23.36■■□□□ 1.33
MUC1-204ENST00000343256 TCIRG1Q13488 830 aa23.35■■□□□ 1.33
MUC1-204ENST00000343256 SCARF1Q14162 830 aa23.35■■□□□ 1.33
MUC1-204ENST00000343256 XAGE3Q8WTP9 111 aa23.35■■□□□ 1.33
MUC1-204ENST00000343256 DDX60Q8IY21 1712 aaKnown RBP23.35■■□□□ 1.33
MUC1-204ENST00000343256 NEFMP07197 916 aa23.34■■□□□ 1.33
MUC1-204ENST00000343256 HABP4Q5JVS0 413 aaKnown RBP23.34■■□□□ 1.33
MUC1-204ENST00000343256 TSPYL4Q9UJ04 414 aa23.34■■□□□ 1.33
MUC1-204ENST00000343256 PAPPA2Q9BXP8 1791 aa23.34■■□□□ 1.33
MUC1-204ENST00000343256 VIL1P09327 827 aaKnown RBP23.33■■□□□ 1.33
MUC1-204ENST00000343256 NFE2L2Q16236 605 aa23.33■■□□□ 1.33
MUC1-204ENST00000343256 FBXO46Q6PJ61 603 aaPredicted RBP23.33■■□□□ 1.33
MUC1-204ENST00000343256 EYA3Q99504 573 aa23.33■■□□□ 1.33
MUC1-204ENST00000343256 UBE2Q2LH0YL09 131 aa23.32■■□□□ 1.32
MUC1-204ENST00000343256 GPR25O00155 361 aa23.32■■□□□ 1.32
MUC1-204ENST00000343256 TBC1D16Q8TBP0 767 aa23.32■■□□□ 1.32
MUC1-204ENST00000343256 FKBP1BP68106 108 aa23.31■■□□□ 1.32
MUC1-204ENST00000343256 MKRN3Q13064 507 aaKnown RBP23.31■■□□□ 1.32
MUC1-204ENST00000343256 PRAMEF18Q5VWM3 479 aa23.31■■□□□ 1.32
MUC1-204ENST00000343256 PLEKHF1Q96S99 279 aa23.31■■□□□ 1.32
MUC1-204ENST00000343256 FAM89AQ96GI7 184 aa23.3■■□□□ 1.32
MUC1-204ENST00000343256 ZNF280AP59817 542 aaPredicted RBP23.29■■□□□ 1.32
MUC1-204ENST00000343256 ZC3H12CQ9C0D7 883 aaKnown RBP23.29■■□□□ 1.32
MUC1-204ENST00000343256 R3HDMLQ9H3Y0 253 aa23.29■■□□□ 1.32
MUC1-204ENST00000343256 G3V3G9 751 aa23.28■■□□□ 1.32
MUC1-204ENST00000343256 SF3B3Q15393 1217 aaKnown RBP23.28■■□□□ 1.32
MUC1-204ENST00000343256 RTL5Q5HYW3 569 aaPredicted RBP23.28■■□□□ 1.32
MUC1-204ENST00000343256 DCAF8Q5TAQ9 597 aa23.28■■□□□ 1.32
MUC1-204ENST00000343256 TM4SF4P48230 202 aa23.27■■□□□ 1.32
MUC1-204ENST00000343256 RSBN1LQ6PCB5 846 aaPredicted RBP23.27■■□□□ 1.32
MUC1-204ENST00000343256 CCER1Q8TC90 406 aaPredicted RBP23.27■■□□□ 1.32
MUC1-204ENST00000343256 TTLL12Q14166 644 aaPredicted RBP23.26■■□□□ 1.31
MUC1-204ENST00000343256 MYOZ2Q9NPC6 264 aa23.26■■□□□ 1.31
MUC1-204ENST00000343256 POTEFA5A3E0 1075 aa23.25■■□□□ 1.31
MUC1-204ENST00000343256 ATP5J2-PTCD1G3V325 749 aa23.25■■□□□ 1.31
MUC1-204ENST00000343256 FKTNO75072 461 aa23.25■■□□□ 1.31
MUC1-204ENST00000343256 UFL1O94874 794 aa23.25■■□□□ 1.31
MUC1-204ENST00000343256 AGBL3Q8NEM8 1001 aa23.25■■□□□ 1.31
MUC1-204ENST00000343256 RPS8P62241 208 aaKnown RBP23.24■■□□□ 1.31
MUC1-204ENST00000343256 NOM1Q5C9Z4 860 aaKnown RBP23.24■■□□□ 1.31
MUC1-204ENST00000343256 PITPNM2Q9BZ72 1349 aa23.23■■□□□ 1.31
MUC1-204ENST00000343256 USP17L8P0C7I0 530 aa23.22■■□□□ 1.31
MUC1-204ENST00000343256 KRT24Q2M2I5 525 aa23.22■■□□□ 1.31
MUC1-204ENST00000343256 GMLQ99445 158 aa23.22■■□□□ 1.31
MUC1-204ENST00000343256 ISCA1Q9BUE6 129 aa23.22■■□□□ 1.31
MUC1-204ENST00000343256 SEC31BQ9NQW1 1179 aa23.22■■□□□ 1.31
MUC1-204ENST00000343256 ANKIB1Q9P2G1 1089 aa23.22■■□□□ 1.31
MUC1-204ENST00000343256 MAPK8IP3Q9UPT6 1336 aa23.22■■□□□ 1.31
MUC1-204ENST00000343256 MKI67P46013 3256 aaKnown RBP23.22■■□□□ 1.31
MUC1-204ENST00000343256 NBPF9Q3BBW0 867 aa23.21■■□□□ 1.31
MUC1-204ENST00000343256 PODXL2Q9NZ53 605 aa23.21■■□□□ 1.31
MUC1-204ENST00000343256 GGA1Q9UJY5 639 aa23.21■■□□□ 1.31
MUC1-204ENST00000343256 ZNF609O15014 1411 aa23.21■■□□□ 1.31
MUC1-204ENST00000343256 PSME4Q14997 1843 aa23.21■■□□□ 1.31
MUC1-204ENST00000343256 IRS4O14654 1257 aaPredicted RBP23.2■■□□□ 1.3
MUC1-204ENST00000343256 FXR1P51114 621 aaKnown RBP eCLIP23.2■■□□□ 1.3
MUC1-204ENST00000343256 CHPF2Q9P2E5 772 aa23.2■■□□□ 1.3
MUC1-204ENST00000343256 SREBF2Q12772 1141 aa23.19■■□□□ 1.3
MUC1-204ENST00000343256 PRKG1Q13976 671 aa23.19■■□□□ 1.3
MUC1-204ENST00000343256 PLBD2Q8NHP8 589 aa23.19■■□□□ 1.3
MUC1-204ENST00000343256 TRIM17Q9Y577 477 aa23.19■■□□□ 1.3
MUC1-204ENST00000343256 PTPN12Q05209 780 aaKnown RBP23.18■■□□□ 1.3
MUC1-204ENST00000343256 RIPK4P57078 832 aa23.17■■□□□ 1.3
MUC1-204ENST00000343256 ANKRD13DQ6ZTN6 518 aa23.17■■□□□ 1.3
MUC1-204ENST00000343256 MXD3Q9BW11 206 aa23.17■■□□□ 1.3
MUC1-204ENST00000343256 CFHR5Q9BXR6 569 aa23.17■■□□□ 1.3
MUC1-204ENST00000343256 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.16■■□□□ 1.3
MUC1-204ENST00000343256 USP17L3A6NCW0 530 aa23.15■■□□□ 1.3
MUC1-204ENST00000343256 USP17L4A6NCW7 530 aa23.15■■□□□ 1.3
MUC1-204ENST00000343256 OTOP1Q7RTM1 612 aa23.15■■□□□ 1.3
MUC1-204ENST00000343256 USP17L1Q7RTZ2 530 aa23.15■■□□□ 1.3
MUC1-204ENST00000343256 NF2P35240 595 aa23.14■■□□□ 1.29
MUC1-204ENST00000343256 CCDC85AQ96PX6 553 aaPredicted RBP23.14■■□□□ 1.29
MUC1-204ENST00000343256 BABAM1Q9NWV8 329 aa23.14■■□□□ 1.29
MUC1-204ENST00000343256 FZD1Q9UP38 647 aa23.14■■□□□ 1.29
MUC1-204ENST00000343256 HTTP42858 3142 aa23.14■■□□□ 1.29
MUC1-204ENST00000343256 WTIPA6NIX2 430 aaPredicted RBP23.13■■□□□ 1.29
MUC1-204ENST00000343256 EN2P19622 333 aaPredicted RBP23.13■■□□□ 1.29
MUC1-204ENST00000343256 SPRYD7Q5W111 196 aa23.13■■□□□ 1.29
MUC1-204ENST00000343256 INTS3Q68E01 1043 aaKnown RBP23.13■■□□□ 1.29
MUC1-204ENST00000343256 KIAA0100Q14667 2235 aaKnown RBP23.13■■□□□ 1.29
MUC1-204ENST00000343256 WNT10BO00744 389 aa23.12■■□□□ 1.29
MUC1-204ENST00000343256 SASH1O94885 1247 aa23.12■■□□□ 1.29
MUC1-204ENST00000343256 ARMC9Q7Z3E5 817 aa23.12■■□□□ 1.29
MUC1-204ENST00000343256 FBXW7Q969H0 707 aa23.12■■□□□ 1.29
MUC1-204ENST00000343256 PNNQ9H307 717 aaKnown RBP23.12■■□□□ 1.29
MUC1-204ENST00000343256 HDGFL1Q5TGJ6 251 aa23.11■■□□□ 1.29
MUC1-204ENST00000343256 PODNQ7Z5L7 613 aa23.11■■□□□ 1.29
MUC1-204ENST00000343256 RBBP6Q7Z6E9 1792 aaKnown RBP23.1■■□□□ 1.29
MUC1-204ENST00000343256 ALDH1A1P00352 501 aa23.1■■□□□ 1.29
MUC1-204ENST00000343256 JARID2Q92833 1246 aaPredicted RBP23.1■■□□□ 1.29
MUC1-204ENST00000343256 ANGEL1Q9UNK9 670 aaKnown RBP23.1■■□□□ 1.29
MUC1-204ENST00000343256 COLQQ9Y215 455 aaPredicted RBP23.1■■□□□ 1.29
MUC1-204ENST00000343256 LAS1LQ9Y4W2 734 aaKnown RBP23.1■■□□□ 1.29
MUC1-204ENST00000343256 CENPFP49454 3210 aa23.1■■□□□ 1.29
MUC1-204ENST00000343256 XDHP47989 1333 aa23.09■■□□□ 1.29
MUC1-204ENST00000343256 IFNL1Q8IU54 200 aa23.09■■□□□ 1.29
MUC1-204ENST00000343256 ZBTB38Q8NAP3 1195 aaPredicted RBP23.09■■□□□ 1.29
MUC1-204ENST00000343256 PTPN22Q9Y2R2 807 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms