RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 TMOD3Q9NYL9 352 aa15.7■□□□□ 0.1
PDE4D-203ENST00000340635 CYB5RLQ6IPT4 315 aa15.7■□□□□ 0.1
PDE4D-203ENST00000340635 C6orf229H3BNL8 230 aa15.7■□□□□ 0.1
PDE4D-203ENST00000340635 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.7■□□□□ 0.1
PDE4D-203ENST00000340635 GSDMBQ8TAX9 411 aa15.7■□□□□ 0.1
PDE4D-203ENST00000340635 PPANQ9NQ55 473 aaKnown RBP15.7■□□□□ 0.1
PDE4D-203ENST00000340635 AFG3L2Q9Y4W6 797 aa15.7■□□□□ 0.1
PDE4D-203ENST00000340635 PPP1R21Q6ZMI0 780 aa15.7■□□□□ 0.1
PDE4D-203ENST00000340635 AGTPBP1Q9UPW5 1226 aa15.7■□□□□ 0.1
PDE4D-203ENST00000340635 SUDS3Q9H7L9 328 aaPredicted RBP15.7■□□□□ 0.1
PDE4D-203ENST00000340635 EXOC6BQ9Y2D4 811 aa15.7■□□□□ 0.1
PDE4D-203ENST00000340635 CDCA7LQ96GN5 454 aa15.69■□□□□ 0.1
PDE4D-203ENST00000340635 NKIRAS1Q9NYS0 192 aa15.69■□□□□ 0.1
PDE4D-203ENST00000340635 A0A1B0GUA9 196 aa15.69■□□□□ 0.1
PDE4D-203ENST00000340635 RAB11FIP4Q86YS3 637 aa15.69■□□□□ 0.1
PDE4D-203ENST00000340635 USH1CQ9Y6N9 552 aa15.69■□□□□ 0.1
PDE4D-203ENST00000340635 METAP2P50579 478 aaKnown RBP eCLIP15.69■□□□□ 0.1
PDE4D-203ENST00000340635 MFSD6Q6ZSS7 791 aa15.69■□□□□ 0.1
PDE4D-203ENST00000340635 UBLCP1Q8WVY7 318 aaPredicted RBP15.69■□□□□ 0.1
PDE4D-203ENST00000340635 IFT81Q8WYA0 676 aa15.69■□□□□ 0.1
PDE4D-203ENST00000340635 ATP6V1E1P36543 226 aa15.69■□□□□ 0.1
PDE4D-203ENST00000340635 SH2D4BQ5SQS7 431 aa15.69■□□□□ 0.1
PDE4D-203ENST00000340635 FAM160A1Q05DH4 1040 aa15.68■□□□□ 0.1
PDE4D-203ENST00000340635 UVSSAQ2YD98 709 aa15.68■□□□□ 0.1
PDE4D-203ENST00000340635 GPR161Q8N6U8 529 aaKnown RBP15.68■□□□□ 0.1
PDE4D-203ENST00000340635 PPP1R12CQ9BZL4 782 aa15.68■□□□□ 0.1
PDE4D-203ENST00000340635 PLS1Q14651 629 aa15.68■□□□□ 0.1
PDE4D-203ENST00000340635 SLC26A6Q9BXS9 759 aa15.68■□□□□ 0.1
PDE4D-203ENST00000340635 TDRD9Q8NDG6 1382 aaKnown RBP15.68■□□□□ 0.1
PDE4D-203ENST00000340635 LIMCH1Q9UPQ0 1083 aa15.68■□□□□ 0.1
PDE4D-203ENST00000340635 ANKRD24Q8TF21 1146 aa15.68■□□□□ 0.1
PDE4D-203ENST00000340635 GOLGA1Q92805 767 aa15.68■□□□□ 0.1
PDE4D-203ENST00000340635 NBPF7P0C2Y1 421 aaPredicted RBP15.68■□□□□ 0.1
PDE4D-203ENST00000340635 ITIH3Q06033 890 aa15.68■□□□□ 0.1
PDE4D-203ENST00000340635 CEP128Q6ZU80 1094 aa15.68■□□□□ 0.1
PDE4D-203ENST00000340635 MCM10Q7L590 875 aa15.68■□□□□ 0.1
PDE4D-203ENST00000340635 BICDL2A1A5D9 508 aa15.68■□□□□ 0.1
PDE4D-203ENST00000340635 GNAT3A8MTJ3 354 aa15.68■□□□□ 0.1
PDE4D-203ENST00000340635 ZNF165P49910 485 aa15.68■□□□□ 0.1
PDE4D-203ENST00000340635 PSPC1Q8WXF1 523 aaKnown RBP15.68■□□□□ 0.1
PDE4D-203ENST00000340635 CAPZA3Q96KX2 299 aa15.68■□□□□ 0.1
PDE4D-203ENST00000340635 VPS18Q9P253 973 aa15.68■□□□□ 0.1
PDE4D-203ENST00000340635 B4DLN1 442 aa15.67■□□□□ 0.1
PDE4D-203ENST00000340635 MRPL12P52815 198 aaKnown RBP15.67■□□□□ 0.1
PDE4D-203ENST00000340635 TLDC2A0PJX2 215 aa15.67■□□□□ 0.1
PDE4D-203ENST00000340635 VIMP08670 466 aaKnown RBP15.67■□□□□ 0.1
PDE4D-203ENST00000340635 AFMP43652 599 aa15.67■□□□□ 0.1
PDE4D-203ENST00000340635 INPP1P49441 399 aa15.67■□□□□ 0.1
PDE4D-203ENST00000340635 MICU3Q86XE3 530 aa15.67■□□□□ 0.1
PDE4D-203ENST00000340635 CETN3O15182 167 aa15.67■□□□□ 0.1
PDE4D-203ENST00000340635 MTUS1Q9ULD2 1270 aa15.67■□□□□ 0.1
PDE4D-203ENST00000340635 CALCOCO2Q13137 446 aa15.67■□□□□ 0.1
PDE4D-203ENST00000340635 TSPYL2Q9H2G4 693 aaPredicted RBP15.67■□□□□ 0.1
PDE4D-203ENST00000340635 KMT5BQ4FZB7 885 aa15.67■□□□□ 0.1
PDE4D-203ENST00000340635 RPAP2Q8IXW5 612 aaPredicted RBP15.67■□□□□ 0.1
PDE4D-203ENST00000340635 HVCN1Q96D96 273 aa15.67■□□□□ 0.1
PDE4D-203ENST00000340635 MYD88Q99836 296 aa15.67■□□□□ 0.1
PDE4D-203ENST00000340635 KRT86O43790 486 aa15.67■□□□□ 0.1
PDE4D-203ENST00000340635 KRT83P78385 493 aa15.67■□□□□ 0.1
PDE4D-203ENST00000340635 TXNDC2Q86VQ3 553 aa15.67■□□□□ 0.1
PDE4D-203ENST00000340635 RNF34Q969K3 372 aa15.67■□□□□ 0.1
PDE4D-203ENST00000340635 PPP2R1AP30153 589 aa15.66■□□□□ 0.1
PDE4D-203ENST00000340635 SYKP43405 635 aa15.66■□□□□ 0.1
PDE4D-203ENST00000340635 TRPC3Q13507 836 aa15.66■□□□□ 0.1
PDE4D-203ENST00000340635 PPME1Q9Y570 386 aa15.66■□□□□ 0.1
PDE4D-203ENST00000340635 GJB2P29033 226 aa15.66■□□□□ 0.1
PDE4D-203ENST00000340635 IRX5P78411 483 aaPredicted RBP15.66■□□□□ 0.1
PDE4D-203ENST00000340635 TRAF1Q13077 416 aa15.66■□□□□ 0.1
PDE4D-203ENST00000340635 NBPF11Q86T75 865 aa15.66■□□□□ 0.1
PDE4D-203ENST00000340635 ZNF692Q9BU19 519 aaPredicted RBP15.66■□□□□ 0.1
PDE4D-203ENST00000340635 LDHCP07864 332 aa15.66■□□□□ 0.1
PDE4D-203ENST00000340635 SEL1L2Q5TEA6 688 aa15.66■□□□□ 0.1
PDE4D-203ENST00000340635 FAM204AQ9H8W3 233 aa15.66■□□□□ 0.1
PDE4D-203ENST00000340635 CALM1P0DP23 149 aa15.66■□□□□ 0.1
PDE4D-203ENST00000340635 CALM2P0DP24 149 aa15.66■□□□□ 0.1
PDE4D-203ENST00000340635 CALM3P0DP25 149 aa15.66■□□□□ 0.1
PDE4D-203ENST00000340635 SRGAP1Q7Z6B7 1085 aa15.66■□□□□ 0.1
PDE4D-203ENST00000340635 USP16Q9Y5T5 823 aa15.66■□□□□ 0.1
PDE4D-203ENST00000340635 TSPY3P0CV98 308 aa15.66■□□□□ 0.1
PDE4D-203ENST00000340635 TSPY8P0CW00 308 aa15.66■□□□□ 0.1
PDE4D-203ENST00000340635 AKNAD1Q5T1N1 836 aa15.66■□□□□ 0.1
PDE4D-203ENST00000340635 BUB1BO60566 1050 aaPredicted RBP15.65■□□□□ 0.1
PDE4D-203ENST00000340635 TUBB4AP04350 444 aa15.65■□□□□ 0.1
PDE4D-203ENST00000340635 PPP2R5CQ13362 524 aa15.65■□□□□ 0.1
PDE4D-203ENST00000340635 CCDC62Q6P9F0 684 aa15.65■□□□□ 0.1
PDE4D-203ENST00000340635 TRMT112Q9UI30 125 aaKnown RBP15.65■□□□□ 0.1
PDE4D-203ENST00000340635 STK10O94804 968 aaKnown RBP15.65■□□□□ 0.1
PDE4D-203ENST00000340635 SLC8A3P57103 927 aa15.65■□□□□ 0.1
PDE4D-203ENST00000340635 DIXDC1Q155Q3 683 aa15.65■□□□□ 0.1
PDE4D-203ENST00000340635 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.65■□□□□ 0.1
PDE4D-203ENST00000340635 PRAM1Q96QH2 718 aa15.65■□□□□ 0.1
PDE4D-203ENST00000340635 CSRNP2Q9H175 543 aa15.65■□□□□ 0.1
PDE4D-203ENST00000340635 HAUS2Q9NVX0 235 aa15.65■□□□□ 0.1
PDE4D-203ENST00000340635 PTCD1O75127 700 aaKnown RBP15.65■□□□□ 0.1
PDE4D-203ENST00000340635 FMNL3Q8IVF7 1028 aa15.65■□□□□ 0.1
PDE4D-203ENST00000340635 TMEM57Q8N5G2 664 aa15.65■□□□□ 0.1
PDE4D-203ENST00000340635 ARHGEF2Q92974 986 aaKnown RBP15.65■□□□□ 0.1
PDE4D-203ENST00000340635 PHLDB2Q86SQ0 1253 aa15.65■□□□□ 0.1
PDE4D-203ENST00000340635 C6orf50Q9HD87 102 aa15.65■□□□□ 0.1
PDE4D-203ENST00000340635 PSMA7O14818 248 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms