RNA–Protein interactions for RNA: ENST00000340612.4

CCDC30-201, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-201ENST00000340612 PARP2Q9UGN5 583 aa3.26□□□□□ -1.89
CCDC30-201ENST00000340612 RTCBQ9Y3I0 505 aaKnown RBP3.26□□□□□ -1.89
CCDC30-201ENST00000340612 A0A1B0GTH6 734 aa3.26□□□□□ -1.89
CCDC30-201ENST00000340612 MAP2K3P46734 347 aa3.26□□□□□ -1.89
CCDC30-201ENST00000340612 C9orf131Q5VYM1 1079 aa3.26□□□□□ -1.89
CCDC30-201ENST00000340612 CEP63Q96MT8 703 aa3.26□□□□□ -1.89
CCDC30-201ENST00000340612 CITED4Q96RK1 184 aa3.26□□□□□ -1.89
CCDC30-201ENST00000340612 CFHR5Q9BXR6 569 aa3.26□□□□□ -1.89
CCDC30-201ENST00000340612 ZCCHC2Q9C0B9 1178 aaKnown RBP3.26□□□□□ -1.89
CCDC30-201ENST00000340612 NEUROD4Q9HD90 331 aa3.26□□□□□ -1.89
CCDC30-201ENST00000340612 EIF1AYO14602 144 aaKnown RBP3.25□□□□□ -1.89
CCDC30-201ENST00000340612 INPP5BP32019 993 aa3.25□□□□□ -1.89
CCDC30-201ENST00000340612 ZEB1P37275 1124 aaPredicted RBP3.25□□□□□ -1.89
CCDC30-201ENST00000340612 DGKGP49619 791 aa3.25□□□□□ -1.89
CCDC30-201ENST00000340612 TYRO3Q06418 890 aa3.25□□□□□ -1.89
CCDC30-201ENST00000340612 BACH2Q9BYV9 841 aa3.25□□□□□ -1.89
CCDC30-201ENST00000340612 TMEM63CQ9P1W3 806 aa3.25□□□□□ -1.89
CCDC30-201ENST00000340612 KCNMB2Q9Y691 235 aa3.25□□□□□ -1.89
CCDC30-201ENST00000340612 GJA3Q9Y6H8 435 aa3.25□□□□□ -1.89
CCDC30-201ENST00000340612 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.25□□□□□ -1.89
CCDC30-201ENST00000340612 IGSF3O75054 1194 aa3.25□□□□□ -1.89
CCDC30-201ENST00000340612 POLR3DP05423 398 aaPredicted RBP3.25□□□□□ -1.89
CCDC30-201ENST00000340612 TCF3P15923 654 aa3.25□□□□□ -1.89
CCDC30-201ENST00000340612 ARSDP51689 593 aa3.25□□□□□ -1.89
CCDC30-201ENST00000340612 XPCQ01831 940 aaPredicted RBP3.25□□□□□ -1.89
CCDC30-201ENST00000340612 ENOX2Q16206 610 aaKnown RBP3.25□□□□□ -1.89
CCDC30-201ENST00000340612 MCTP1Q6DN14 999 aa3.25□□□□□ -1.89
CCDC30-201ENST00000340612 PIK3R5Q8WYR1 880 aa3.25□□□□□ -1.89
CCDC30-201ENST00000340612 DCDC2BA2VCK2 349 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 UBAP1LF5GYI3 381 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 H7C1W4 665 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 C2CD2LO14523 706 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 PRPF40AO75400 957 aaKnown RBP3.24□□□□□ -1.89
CCDC30-201ENST00000340612 PCSK2P16519 638 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 USP5P45974 858 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 RBM10P98175 930 aaKnown RBP3.24□□□□□ -1.89
CCDC30-201ENST00000340612 LRP8Q14114 963 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 COL19A1Q14993 1142 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 LDLRAD1Q5T700 205 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 KRT25Q7Z3Z0 450 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 ZNF438Q7Z4V0 828 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 TTC16Q8NEE8 873 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 ALKBH8Q96BT7 664 aaKnown RBP3.24□□□□□ -1.89
CCDC30-201ENST00000340612 BTBD6Q96KE9 485 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 CSRNP1Q96S65 589 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 BRD7Q9NPI1 651 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 DYRK1BQ9Y463 629 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 TNFRSF21O75509 655 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 CDK11BP21127 795 aaKnown RBP3.24□□□□□ -1.89
CCDC30-201ENST00000340612 ATP2B2Q01814 1243 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 MRPL58Q14197 206 aaKnown RBP3.24□□□□□ -1.89
CCDC30-201ENST00000340612 IER5Q5VY09 327 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 NUCKS1Q9H1E3 243 aaKnown RBP3.24□□□□□ -1.89
CCDC30-201ENST00000340612 GGA1Q9UJY5 639 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 HCN2Q9UL51 889 aa3.24□□□□□ -1.89
CCDC30-201ENST00000340612 CDK11AQ9UQ88 783 aaPredicted RBP3.24□□□□□ -1.89
CCDC30-201ENST00000340612 SFSWAPQ12872 951 aaKnown RBP3.23□□□□□ -1.89
CCDC30-201ENST00000340612 PSMD2Q13200 908 aa3.23□□□□□ -1.89
CCDC30-201ENST00000340612 HIF1AQ16665 826 aa3.23□□□□□ -1.89
CCDC30-201ENST00000340612 WDR44Q5JSH3 913 aa3.23□□□□□ -1.89
CCDC30-201ENST00000340612 RAB44Q7Z6P3 723 aaPredicted RBP3.23□□□□□ -1.89
CCDC30-201ENST00000340612 EPS8L3Q8TE67 593 aaKnown RBP3.23□□□□□ -1.89
CCDC30-201ENST00000340612 MRS2Q9HD23 443 aa3.23□□□□□ -1.89
CCDC30-201ENST00000340612 CNTN3Q9P232 1028 aa3.23□□□□□ -1.89
CCDC30-201ENST00000340612 ANKIB1Q9P2G1 1089 aa3.23□□□□□ -1.89
CCDC30-201ENST00000340612 VTI1BQ9UEU0 232 aa3.23□□□□□ -1.89
CCDC30-201ENST00000340612 GDF2Q9UK05 429 aaPredicted RBP3.23□□□□□ -1.89
CCDC30-201ENST00000340612 XYLBO75191 536 aa3.23□□□□□ -1.89
CCDC30-201ENST00000340612 F11P03951 625 aa3.23□□□□□ -1.89
CCDC30-201ENST00000340612 CYP2E1P05181 493 aaPredicted RBP3.23□□□□□ -1.89
CCDC30-201ENST00000340612 YBX3P16989 372 aaKnown RBP eCLIP3.23□□□□□ -1.89
CCDC30-201ENST00000340612 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.23□□□□□ -1.89
CCDC30-201ENST00000340612 PGBD3Q8N328 593 aa3.23□□□□□ -1.89
CCDC30-201ENST00000340612 C1orf127Q8N9H9 656 aa3.23□□□□□ -1.89
CCDC30-201ENST00000340612 TRIM11Q96F44 468 aa3.23□□□□□ -1.89
CCDC30-201ENST00000340612 ELP3Q9H9T3 547 aa3.23□□□□□ -1.89
CCDC30-201ENST00000340612 STRN4Q9NRL3 753 aa3.23□□□□□ -1.89
CCDC30-201ENST00000340612 KANSL3Q9P2N6 904 aa3.23□□□□□ -1.89
CCDC30-201ENST00000340612 CLSPNQ9HAW4 1339 aa3.22□□□□□ -1.89
CCDC30-201ENST00000340612 EREGO14944 169 aa3.22□□□□□ -1.89
CCDC30-201ENST00000340612 SORBS3O60504 671 aa3.22□□□□□ -1.89
CCDC30-201ENST00000340612 CPNE3O75131 537 aaKnown RBP3.22□□□□□ -1.89
CCDC30-201ENST00000340612 SASH3O75995 380 aa3.22□□□□□ -1.89
CCDC30-201ENST00000340612 TARSP26639 723 aaKnown RBP3.22□□□□□ -1.89
CCDC30-201ENST00000340612 DEKP35659 375 aaKnown RBP3.22□□□□□ -1.89
CCDC30-201ENST00000340612 DAB2P98082 770 aa3.22□□□□□ -1.89
CCDC30-201ENST00000340612 GOLGA6L1Q8N7Z2 621 aa3.22□□□□□ -1.89
CCDC30-201ENST00000340612 TMEM87AQ8NBN3 555 aa3.22□□□□□ -1.89
CCDC30-201ENST00000340612 CRISPLD1Q9H336 500 aa3.22□□□□□ -1.89
CCDC30-201ENST00000340612 NPHS2Q9NP85 383 aa3.22□□□□□ -1.89
CCDC30-201ENST00000340612 FAM13BQ9NYF5 915 aa3.22□□□□□ -1.89
CCDC30-201ENST00000340612 NOP53Q9NZM5 478 aaKnown RBP3.22□□□□□ -1.89
CCDC30-201ENST00000340612 KHNYNO15037 678 aaKnown RBP3.22□□□□□ -1.89
CCDC30-201ENST00000340612 PHACTR2O75167 634 aa3.22□□□□□ -1.89
CCDC30-201ENST00000340612 FZD5Q13467 585 aa3.22□□□□□ -1.89
CCDC30-201ENST00000340612 LAMC2Q13753 1193 aa3.22□□□□□ -1.89
CCDC30-201ENST00000340612 TMC4Q7Z404 712 aa3.22□□□□□ -1.89
CCDC30-201ENST00000340612 CCDC74AQ96AQ1 378 aa3.22□□□□□ -1.89
CCDC30-201ENST00000340612 CHRDQ9H2X0 955 aa3.22□□□□□ -1.89
CCDC30-201ENST00000340612 LATS2Q9NRM7 1088 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms