RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 LRRC24Q50LG9 513 aa16.45■□□□□ 0.22
SF1-202ENST00000334944 SLAIN2Q9P270 581 aa16.45■□□□□ 0.22
SF1-202ENST00000334944 COL15A1P39059 1388 aa16.45■□□□□ 0.22
SF1-202ENST00000334944 WDR17Q8IZU2 1322 aa16.45■□□□□ 0.22
SF1-202ENST00000334944 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.44■□□□□ 0.22
SF1-202ENST00000334944 DNM1Q05193 864 aaKnown RBP16.44■□□□□ 0.22
SF1-202ENST00000334944 VPS53Q5VIR6 699 aa16.44■□□□□ 0.22
SF1-202ENST00000334944 PUS3Q9BZE2 481 aaKnown RBP16.44■□□□□ 0.22
SF1-202ENST00000334944 CASP7P55210 303 aa16.44■□□□□ 0.22
SF1-202ENST00000334944 FOXO4P98177 505 aa16.44■□□□□ 0.22
SF1-202ENST00000334944 GOLIM4O00461 696 aa16.43■□□□□ 0.22
SF1-202ENST00000334944 TAF7LQ5H9L4 462 aa16.43■□□□□ 0.22
SF1-202ENST00000334944 ADAMTS7Q9UKP4 1686 aa16.43■□□□□ 0.22
SF1-202ENST00000334944 A0A0G2JLW4 131 aa16.43■□□□□ 0.22
SF1-202ENST00000334944 EPB41L2O43491 1005 aaKnown RBP16.43■□□□□ 0.22
SF1-202ENST00000334944 BLOC1S2Q6QNY1 142 aa16.43■□□□□ 0.22
SF1-202ENST00000334944 SYNE4Q8N205 404 aa16.43■□□□□ 0.22
SF1-202ENST00000334944 PCDH11XQ9BZA7 1347 aa16.43■□□□□ 0.22
SF1-202ENST00000334944 PCDH11YQ9BZA8 1340 aa16.43■□□□□ 0.22
SF1-202ENST00000334944 TAF5LO75529 589 aa16.42■□□□□ 0.22
SF1-202ENST00000334944 IL2RBP14784 551 aa16.42■□□□□ 0.22
SF1-202ENST00000334944 CHAF1AQ13111 956 aaPredicted RBP16.42■□□□□ 0.22
SF1-202ENST00000334944 RABL6Q3YEC7 729 aaPredicted RBP16.42■□□□□ 0.22
SF1-202ENST00000334944 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.42■□□□□ 0.22
SF1-202ENST00000334944 A0A0G2JS52 829 aa16.42■□□□□ 0.22
SF1-202ENST00000334944 MBD3O95983 291 aa16.42■□□□□ 0.22
SF1-202ENST00000334944 F13A1P00488 732 aa16.42■□□□□ 0.22
SF1-202ENST00000334944 ANKRD7Q92527 254 aa16.42■□□□□ 0.22
SF1-202ENST00000334944 ZFP91Q96JP5 570 aaPredicted RBP16.42■□□□□ 0.22
SF1-202ENST00000334944 CWC25Q9NXE8 425 aaPredicted RBP16.42■□□□□ 0.22
SF1-202ENST00000334944 ASAP1Q9ULH1 1129 aa16.42■□□□□ 0.22
SF1-202ENST00000334944 SLFN14P0C7P3 912 aa16.42■□□□□ 0.22
SF1-202ENST00000334944 FOSBP53539 338 aa16.42■□□□□ 0.22
SF1-202ENST00000334944 NCBP1Q09161 790 aaKnown RBP16.42■□□□□ 0.22
SF1-202ENST00000334944 SNRKQ9NRH2 765 aa16.42■□□□□ 0.22
SF1-202ENST00000334944 ATP5JP18859 108 aa16.41■□□□□ 0.22
SF1-202ENST00000334944 HIP1O00291 1037 aa16.41■□□□□ 0.22
SF1-202ENST00000334944 ATG9AQ7Z3C6 839 aa16.41■□□□□ 0.22
SF1-202ENST00000334944 KCNF1Q9H3M0 494 aa16.41■□□□□ 0.22
SF1-202ENST00000334944 ST7Q9NRC1 585 aa16.41■□□□□ 0.22
SF1-202ENST00000334944 MTMR6Q9Y217 621 aa16.41■□□□□ 0.22
SF1-202ENST00000334944 FAM89AQ96GI7 184 aa16.4■□□□□ 0.22
SF1-202ENST00000334944 CRYBG1Q9Y4K1 1723 aa16.4■□□□□ 0.22
SF1-202ENST00000334944 TAF3Q5VWG9 929 aa16.4■□□□□ 0.22
SF1-202ENST00000334944 OGFRQ9NZT2 677 aa16.4■□□□□ 0.22
SF1-202ENST00000334944 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.4■□□□□ 0.22
SF1-202ENST00000334944 V9GYY5 206 aaPredicted RBP16.4■□□□□ 0.22
SF1-202ENST00000334944 AFDNP55196 1824 aaKnown RBP16.4■□□□□ 0.22
SF1-202ENST00000334944 H7C1W4 665 aa16.39■□□□□ 0.22
SF1-202ENST00000334944 AP5Z1O43299 807 aa16.39■□□□□ 0.22
SF1-202ENST00000334944 GPTP24298 496 aa16.39■□□□□ 0.22
SF1-202ENST00000334944 TOB2Q14106 344 aaPredicted RBP16.39■□□□□ 0.22
SF1-202ENST00000334944 HSP90AB3PQ58FF7 597 aa16.39■□□□□ 0.22
SF1-202ENST00000334944 LARP1BQ659C4 914 aaKnown RBP16.39■□□□□ 0.22
SF1-202ENST00000334944 CDC37L1Q7L3B6 337 aa16.39■□□□□ 0.22
SF1-202ENST00000334944 SYTL4Q96C24 671 aaPredicted RBP16.39■□□□□ 0.22
SF1-202ENST00000334944 CPDO75976 1380 aa16.39■□□□□ 0.21
SF1-202ENST00000334944 MED23Q9ULK4 1368 aa16.39■□□□□ 0.21
SF1-202ENST00000334944 ZNF609O15014 1411 aa16.39■□□□□ 0.21
SF1-202ENST00000334944 RNF20Q5VTR2 975 aa16.39■□□□□ 0.21
SF1-202ENST00000334944 DNAJC10Q8IXB1 793 aa16.39■□□□□ 0.21
SF1-202ENST00000334944 C16orf45Q96MC5 204 aaPredicted RBP16.39■□□□□ 0.21
SF1-202ENST00000334944 SPTLC3Q9NUV7 552 aa16.39■□□□□ 0.21
SF1-202ENST00000334944 DCCP43146 1447 aa16.39■□□□□ 0.21
SF1-202ENST00000334944 TM6SF1Q9BZW5 370 aa16.39■□□□□ 0.21
SF1-202ENST00000334944 JAK2O60674 1132 aa16.38■□□□□ 0.21
SF1-202ENST00000334944 RPS6KB1P23443 525 aa16.38■□□□□ 0.21
SF1-202ENST00000334944 CHST3Q7LGC8 479 aa16.38■□□□□ 0.21
SF1-202ENST00000334944 KCNB2Q92953 911 aa16.38■□□□□ 0.21
SF1-202ENST00000334944 DDX11Q96FC9 970 aa16.38■□□□□ 0.21
SF1-202ENST00000334944 FKBP4Q02790 459 aaKnown RBP eCLIP16.38■□□□□ 0.21
SF1-202ENST00000334944 TRIM34Q9BYJ4 488 aa16.38■□□□□ 0.21
SF1-202ENST00000334944 CTNNA3Q9UI47 895 aa16.38■□□□□ 0.21
SF1-202ENST00000334944 CYP21A2P08686 494 aa16.37■□□□□ 0.21
SF1-202ENST00000334944 HSP90B1P14625 803 aaKnown RBP16.37■□□□□ 0.21
SF1-202ENST00000334944 PSMA5P28066 241 aa16.37■□□□□ 0.21
SF1-202ENST00000334944 KIAA1524Q8TCG1 905 aa16.37■□□□□ 0.21
SF1-202ENST00000334944 TMOD3Q9NYL9 352 aa16.37■□□□□ 0.21
SF1-202ENST00000334944 TFIP11Q9UBB9 837 aaKnown RBP16.37■□□□□ 0.21
SF1-202ENST00000334944 HAUS7Q99871 368 aa16.37■□□□□ 0.21
SF1-202ENST00000334944 CAPN2P17655 700 aa16.37■□□□□ 0.21
SF1-202ENST00000334944 SH2B1Q9NRF2 756 aaPredicted RBP16.37■□□□□ 0.21
SF1-202ENST00000334944 COL5A2P05997 1499 aaPredicted RBP16.37■□□□□ 0.21
SF1-202ENST00000334944 MRC1P22897 1456 aa16.37■□□□□ 0.21
SF1-202ENST00000334944 ARFGEF2Q9Y6D5 1785 aa16.36■□□□□ 0.21
SF1-202ENST00000334944 ERVV-2B6SEH9 535 aa16.36■□□□□ 0.21
SF1-202ENST00000334944 ADORA1P30542 326 aa16.36■□□□□ 0.21
SF1-202ENST00000334944 GIMAP6Q6P9H5 292 aa16.36■□□□□ 0.21
SF1-202ENST00000334944 PI16Q6UXB8 463 aa16.36■□□□□ 0.21
SF1-202ENST00000334944 ZSCAN31Q96LW9 406 aaPredicted RBP16.36■□□□□ 0.21
SF1-202ENST00000334944 BTG4Q9NY30 223 aa16.36■□□□□ 0.21
SF1-202ENST00000334944 A0A1B0GUL7 405 aa16.36■□□□□ 0.21
SF1-202ENST00000334944 PIGBQ92521 554 aa16.36■□□□□ 0.21
SF1-202ENST00000334944 PAG1Q9NWQ8 432 aa16.36■□□□□ 0.21
SF1-202ENST00000334944 NPHP1O15259 732 aa16.35■□□□□ 0.21
SF1-202ENST00000334944 MCMDC2Q4G0Z9 681 aa16.35■□□□□ 0.21
SF1-202ENST00000334944 Q6ZUG5 572 aa16.35■□□□□ 0.21
SF1-202ENST00000334944 STOX1Q6ZVD7 989 aa16.35■□□□□ 0.21
SF1-202ENST00000334944 ZNF592Q92610 1267 aa16.35■□□□□ 0.21
SF1-202ENST00000334944 FEZ1Q99689 392 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms