RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.64■□□□□ 0.74
TRAPPC11-201ENST00000334690 SBNO1A3KN83 1393 aa19.64■□□□□ 0.73
TRAPPC11-201ENST00000334690 UBASH3AP57075 661 aa19.64■□□□□ 0.73
TRAPPC11-201ENST00000334690 TYRO3Q06418 890 aa19.64■□□□□ 0.73
TRAPPC11-201ENST00000334690 RTN1Q16799 776 aa19.64■□□□□ 0.73
TRAPPC11-201ENST00000334690 NCKAP5LQ9HCH0 1330 aa19.64■□□□□ 0.73
TRAPPC11-201ENST00000334690 PRC1O43663 620 aa19.64■□□□□ 0.73
TRAPPC11-201ENST00000334690 ABCA5Q8WWZ7 1642 aa19.64■□□□□ 0.73
TRAPPC11-201ENST00000334690 SPAG1Q07617 926 aa19.64■□□□□ 0.73
TRAPPC11-201ENST00000334690 TNIP1Q15025 636 aa19.64■□□□□ 0.73
TRAPPC11-201ENST00000334690 NEFHP12036 1026 aa19.63■□□□□ 0.73
TRAPPC11-201ENST00000334690 ISM2Q6H9L7 571 aa19.63■□□□□ 0.73
TRAPPC11-201ENST00000334690 FAM114A1Q8IWE2 563 aa19.63■□□□□ 0.73
TRAPPC11-201ENST00000334690 GCC2Q8IWJ2 1684 aa19.63■□□□□ 0.73
TRAPPC11-201ENST00000334690 RNF113AO15541 343 aaKnown RBP19.63■□□□□ 0.73
TRAPPC11-201ENST00000334690 RNMTO43148 476 aaKnown RBP19.63■□□□□ 0.73
TRAPPC11-201ENST00000334690 TAF3Q5VWG9 929 aa19.63■□□□□ 0.73
TRAPPC11-201ENST00000334690 DNAJC25Q9H1X3 360 aa19.63■□□□□ 0.73
TRAPPC11-201ENST00000334690 ZMYM3Q14202 1370 aa19.63■□□□□ 0.73
TRAPPC11-201ENST00000334690 SPTLC2O15270 562 aa19.63■□□□□ 0.73
TRAPPC11-201ENST00000334690 PRKCSHP14314 528 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC11-201ENST00000334690 RMND1Q9NWS8 449 aa19.63■□□□□ 0.73
TRAPPC11-201ENST00000334690 N4BP3O15049 544 aa19.63■□□□□ 0.73
TRAPPC11-201ENST00000334690 IDEP14735 1019 aa19.62■□□□□ 0.73
TRAPPC11-201ENST00000334690 ATL3Q6DD88 541 aa19.62■□□□□ 0.73
TRAPPC11-201ENST00000334690 GNG11P61952 73 aa19.62■□□□□ 0.73
TRAPPC11-201ENST00000334690 GOLGA6L7A0A1B0GV03 622 aa19.62■□□□□ 0.73
TRAPPC11-201ENST00000334690 TUBB4AP04350 444 aa19.62■□□□□ 0.73
TRAPPC11-201ENST00000334690 TDRD12Q587J7 1177 aaKnown RBP19.62■□□□□ 0.73
TRAPPC11-201ENST00000334690 OTUD7AQ8TE49 926 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC11-201ENST00000334690 C19orf44Q9H6X5 657 aa19.62■□□□□ 0.73
TRAPPC11-201ENST00000334690 CYP7A1P22680 504 aa19.61■□□□□ 0.73
TRAPPC11-201ENST00000334690 GNAQP50148 359 aa19.61■□□□□ 0.73
TRAPPC11-201ENST00000334690 CCDC178Q5BJE1 867 aa19.61■□□□□ 0.73
TRAPPC11-201ENST00000334690 KCNA6P17658 529 aa19.61■□□□□ 0.73
TRAPPC11-201ENST00000334690 CETN2P41208 172 aa19.61■□□□□ 0.73
TRAPPC11-201ENST00000334690 ZNF830Q96NB3 372 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC11-201ENST00000334690 CTAGE1Q96RT6 745 aa19.61■□□□□ 0.73
TRAPPC11-201ENST00000334690 TTC12Q9H892 705 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC11-201ENST00000334690 ANKRD18AQ8IVF6 992 aa19.6■□□□□ 0.73
TRAPPC11-201ENST00000334690 SLC4A4Q9Y6R1 1079 aa19.6■□□□□ 0.73
TRAPPC11-201ENST00000334690 SF3B2Q13435 895 aaKnown RBP19.6■□□□□ 0.73
TRAPPC11-201ENST00000334690 BRAPQ7Z569 592 aa19.6■□□□□ 0.73
TRAPPC11-201ENST00000334690 LRRC27Q9C0I9 530 aa19.6■□□□□ 0.73
TRAPPC11-201ENST00000334690 ERICH4A6NGS2 130 aa19.6■□□□□ 0.73
TRAPPC11-201ENST00000334690 C6orf229H3BNL8 230 aa19.6■□□□□ 0.73
TRAPPC11-201ENST00000334690 USP8P40818 1118 aa19.6■□□□□ 0.73
TRAPPC11-201ENST00000334690 SEPT7Q16181 437 aaKnown RBP19.6■□□□□ 0.73
TRAPPC11-201ENST00000334690 CUL5Q93034 780 aa19.6■□□□□ 0.73
TRAPPC11-201ENST00000334690 BICC1Q9H694 974 aaKnown RBP19.6■□□□□ 0.73
TRAPPC11-201ENST00000334690 BMS1Q14692 1282 aaKnown RBP19.59■□□□□ 0.73
TRAPPC11-201ENST00000334690 STX8Q9UNK0 236 aa19.59■□□□□ 0.73
TRAPPC11-201ENST00000334690 KIF24Q5T7B8 1368 aa19.59■□□□□ 0.73
TRAPPC11-201ENST00000334690 PTPDC1A2A3K4 754 aa19.59■□□□□ 0.73
TRAPPC11-201ENST00000334690 GNAT2P19087 354 aa19.59■□□□□ 0.73
TRAPPC11-201ENST00000334690 TFCP2Q12800 502 aa19.59■□□□□ 0.73
TRAPPC11-201ENST00000334690 LUZP1Q86V48 1076 aa19.59■□□□□ 0.73
TRAPPC11-201ENST00000334690 MAGI3Q5TCQ9 1506 aa19.59■□□□□ 0.73
TRAPPC11-201ENST00000334690 IFIT1BQ5T764 474 aaKnown RBP19.59■□□□□ 0.73
TRAPPC11-201ENST00000334690 AOPEPQ8N6M6 819 aa19.59■□□□□ 0.73
TRAPPC11-201ENST00000334690 POTEJP0CG39 1038 aa19.59■□□□□ 0.73
TRAPPC11-201ENST00000334690 SGSM2O43147 1006 aa19.58■□□□□ 0.73
TRAPPC11-201ENST00000334690 EHBP1Q8NDI1 1231 aa19.58■□□□□ 0.73
TRAPPC11-201ENST00000334690 CNKSR2Q8WXI2 1034 aa19.58■□□□□ 0.73
TRAPPC11-201ENST00000334690 ALS2CR12Q96Q35 445 aa19.58■□□□□ 0.73
TRAPPC11-201ENST00000334690 KIAA0232Q92628 1395 aa19.58■□□□□ 0.73
TRAPPC11-201ENST00000334690 IL2RBP14784 551 aa19.58■□□□□ 0.73
TRAPPC11-201ENST00000334690 NGLY1Q96IV0 654 aa19.58■□□□□ 0.73
TRAPPC11-201ENST00000334690 UBA5Q9GZZ9 404 aa19.58■□□□□ 0.73
TRAPPC11-201ENST00000334690 RTL1A6NKG5 1358 aa19.58■□□□□ 0.72
TRAPPC11-201ENST00000334690 TRIM75PA6NK02 468 aa19.58■□□□□ 0.72
TRAPPC11-201ENST00000334690 GSTO1P78417 241 aa19.58■□□□□ 0.72
TRAPPC11-201ENST00000334690 TAX1BP1Q86VP1 789 aa19.58■□□□□ 0.72
TRAPPC11-201ENST00000334690 PPP4R3BQ5MIZ7 849 aa19.58■□□□□ 0.72
TRAPPC11-201ENST00000334690 MARCKSP29966 332 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC11-201ENST00000334690 CCDC40Q4G0X9 1142 aa19.57■□□□□ 0.72
TRAPPC11-201ENST00000334690 TRIM47Q96LD4 638 aa19.57■□□□□ 0.72
TRAPPC11-201ENST00000334690 APOBRQ0VD83 1088 aa19.57■□□□□ 0.72
TRAPPC11-201ENST00000334690 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.57■□□□□ 0.72
TRAPPC11-201ENST00000334690 NAA16Q6N069 864 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC11-201ENST00000334690 NAA15Q9BXJ9 866 aaKnown RBP19.56■□□□□ 0.72
TRAPPC11-201ENST00000334690 HELLSQ9NRZ9 838 aa19.56■□□□□ 0.72
TRAPPC11-201ENST00000334690 NBPF6Q5VWK0 638 aa19.56■□□□□ 0.72
TRAPPC11-201ENST00000334690 NBPF5PQ86XG9 351 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC11-201ENST00000334690 NBPF4Q96M43 638 aa19.56■□□□□ 0.72
TRAPPC11-201ENST00000334690 CALM1P0DP23 149 aa19.55■□□□□ 0.72
TRAPPC11-201ENST00000334690 CALM2P0DP24 149 aa19.55■□□□□ 0.72
TRAPPC11-201ENST00000334690 CALM3P0DP25 149 aa19.55■□□□□ 0.72
TRAPPC11-201ENST00000334690 CETN1Q12798 172 aa19.55■□□□□ 0.72
TRAPPC11-201ENST00000334690 ZNF790Q6PG37 636 aa19.55■□□□□ 0.72
TRAPPC11-201ENST00000334690 SMARCC1Q92922 1105 aaPredicted RBP19.55■□□□□ 0.72
TRAPPC11-201ENST00000334690 NLRP3Q96P20 1036 aa19.55■□□□□ 0.72
TRAPPC11-201ENST00000334690 VAT1LQ9HCJ6 419 aa19.55■□□□□ 0.72
TRAPPC11-201ENST00000334690 ARHGEF5Q12774 1597 aa19.55■□□□□ 0.72
TRAPPC11-201ENST00000334690 SHTN1A0MZ66 631 aa19.55■□□□□ 0.72
TRAPPC11-201ENST00000334690 HLA-DOAP06340 250 aa19.54■□□□□ 0.72
TRAPPC11-201ENST00000334690 LMOD1P29536 600 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC11-201ENST00000334690 EHMT1Q9H9B1 1298 aa19.54■□□□□ 0.72
TRAPPC11-201ENST00000334690 PPP1R1BQ9UD71 204 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC11-201ENST00000334690 CALML3P27482 149 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 178.2 ms