RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 KRT32Q14532 448 aa19.03■□□□□ 0.64
UPK3B-202ENST00000334348 DDX11Q96FC9 970 aa19.03■□□□□ 0.64
UPK3B-202ENST00000334348 PA2G4Q9UQ80 394 aaKnown RBP19.03■□□□□ 0.64
UPK3B-202ENST00000334348 ERCC6LQ2NKX8 1250 aa19.02■□□□□ 0.64
UPK3B-202ENST00000334348 E4F1Q66K89 784 aaPredicted RBP19.02■□□□□ 0.64
UPK3B-202ENST00000334348 CEP57L1Q8IYX8 460 aa19.02■□□□□ 0.64
UPK3B-202ENST00000334348 GOLPH3LQ9H4A5 285 aa19.02■□□□□ 0.64
UPK3B-202ENST00000334348 PSDA5PKW4 1024 aaPredicted RBP19.01■□□□□ 0.63
UPK3B-202ENST00000334348 KCNJ6P48051 423 aa19.01■□□□□ 0.63
UPK3B-202ENST00000334348 EIF4A1P60842 406 aaKnown RBP19.01■□□□□ 0.63
UPK3B-202ENST00000334348 CCDC73Q6ZRK6 1079 aa19.01■□□□□ 0.63
UPK3B-202ENST00000334348 NBPF11Q86T75 865 aa19.01■□□□□ 0.63
UPK3B-202ENST00000334348 ORAI2Q96SN7 254 aa19.01■□□□□ 0.63
UPK3B-202ENST00000334348 KINO60870 393 aaKnown RBP19.01■□□□□ 0.63
UPK3B-202ENST00000334348 USPL1Q5W0Q7 1092 aa19.01■□□□□ 0.63
UPK3B-202ENST00000334348 ENGASEQ8NFI3 743 aa19.01■□□□□ 0.63
UPK3B-202ENST00000334348 FSD1Q9BTV5 496 aa19.01■□□□□ 0.63
UPK3B-202ENST00000334348 NAT10Q9H0A0 1025 aaKnown RBP19.01■□□□□ 0.63
UPK3B-202ENST00000334348 HDAC5Q9UQL6 1122 aa19.01■□□□□ 0.63
UPK3B-202ENST00000334348 NPHP1O15259 732 aa19■□□□□ 0.63
UPK3B-202ENST00000334348 ATF3P18847 181 aa19■□□□□ 0.63
UPK3B-202ENST00000334348 CLCN6P51797 869 aa19■□□□□ 0.63
UPK3B-202ENST00000334348 AOPEPQ8N6M6 819 aa19■□□□□ 0.63
UPK3B-202ENST00000334348 PPP1R13BQ96KQ4 1090 aa19■□□□□ 0.63
UPK3B-202ENST00000334348 RGPD8O14715 1765 aaPredicted RBP19■□□□□ 0.63
UPK3B-202ENST00000334348 ALDH1L1O75891 902 aa19■□□□□ 0.63
UPK3B-202ENST00000334348 FAM160A1Q05DH4 1040 aa19■□□□□ 0.63
UPK3B-202ENST00000334348 CCDC150Q8NCX0 1101 aa19■□□□□ 0.63
UPK3B-202ENST00000334348 DDX17Q92841 729 aaKnown RBP19■□□□□ 0.63
UPK3B-202ENST00000334348 EAF2Q96CJ1 260 aaPredicted RBP19■□□□□ 0.63
UPK3B-202ENST00000334348 CEBPZQ03701 1054 aaKnown RBP18.99■□□□□ 0.63
UPK3B-202ENST00000334348 ATL3Q6DD88 541 aa18.99■□□□□ 0.63
UPK3B-202ENST00000334348 NAA16Q6N069 864 aaPredicted RBP18.99■□□□□ 0.63
UPK3B-202ENST00000334348 SMARCC2Q8TAQ2 1214 aa18.99■□□□□ 0.63
UPK3B-202ENST00000334348 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.99■□□□□ 0.63
UPK3B-202ENST00000334348 TAF5LO75529 589 aa18.99■□□□□ 0.63
UPK3B-202ENST00000334348 SASH1O94885 1247 aa18.99■□□□□ 0.63
UPK3B-202ENST00000334348 DHX8Q14562 1220 aaKnown RBP18.99■□□□□ 0.63
UPK3B-202ENST00000334348 ZNF589Q86UQ0 364 aaPredicted RBP18.99■□□□□ 0.63
UPK3B-202ENST00000334348 CERKQ8TCT0 537 aa18.99■□□□□ 0.63
UPK3B-202ENST00000334348 NEK1Q96PY6 1258 aa18.99■□□□□ 0.63
UPK3B-202ENST00000334348 DNAJC2Q99543 621 aaKnown RBP18.99■□□□□ 0.63
UPK3B-202ENST00000334348 LLPHQ9BRT6 129 aaKnown RBP18.99■□□□□ 0.63
UPK3B-202ENST00000334348 C9orf78Q9NZ63 289 aaPredicted RBP18.99■□□□□ 0.63
UPK3B-202ENST00000334348 PNMA6AP0CW24 399 aaPredicted RBP18.98■□□□□ 0.63
UPK3B-202ENST00000334348 NUTM2GQ5VZR2 741 aa18.98■□□□□ 0.63
UPK3B-202ENST00000334348 SYT10Q6XYQ8 523 aa18.98■□□□□ 0.63
UPK3B-202ENST00000334348 CEMIPQ8WUJ3 1361 aa18.98■□□□□ 0.63
UPK3B-202ENST00000334348 CCDC8Q9H0W5 538 aaPredicted RBP18.98■□□□□ 0.63
UPK3B-202ENST00000334348 BOLA2Q9H3K6 86 aa18.98■□□□□ 0.63
UPK3B-202ENST00000334348 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.98■□□□□ 0.63
UPK3B-202ENST00000334348 PLA2G4AP47712 749 aa18.97■□□□□ 0.63
UPK3B-202ENST00000334348 ESCO1Q5FWF5 840 aa18.97■□□□□ 0.63
UPK3B-202ENST00000334348 Q6ZUG5 572 aa18.97■□□□□ 0.63
UPK3B-202ENST00000334348 A0A087WWV3 80 aa18.97■□□□□ 0.63
UPK3B-202ENST00000334348 ZRANB2O95218 330 aaKnown RBP eCLIP18.97■□□□□ 0.63
UPK3B-202ENST00000334348 G3BP1Q13283 466 aaKnown RBP eCLIP18.97■□□□□ 0.63
UPK3B-202ENST00000334348 ARHGAP29Q52LW3 1261 aa18.97■□□□□ 0.63
UPK3B-202ENST00000334348 LRRN4CLQ8ND94 238 aa18.97■□□□□ 0.63
UPK3B-202ENST00000334348 ZNF396Q96N95 335 aaPredicted RBP18.97■□□□□ 0.63
UPK3B-202ENST00000334348 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.97■□□□□ 0.63
UPK3B-202ENST00000334348 HSP90B1P14625 803 aaKnown RBP18.96■□□□□ 0.63
UPK3B-202ENST00000334348 HOXC9P31274 260 aa18.96■□□□□ 0.63
UPK3B-202ENST00000334348 SCRN1Q12765 414 aa18.96■□□□□ 0.63
UPK3B-202ENST00000334348 ARMCX5Q6P1M9 558 aa18.96■□□□□ 0.63
UPK3B-202ENST00000334348 SLAIN2Q9P270 581 aa18.96■□□□□ 0.63
UPK3B-202ENST00000334348 PIP4K2BP78356 416 aa18.96■□□□□ 0.63
UPK3B-202ENST00000334348 USP28Q96RU2 1077 aa18.96■□□□□ 0.63
UPK3B-202ENST00000334348 BPIFA3Q9BQP9 254 aa18.96■□□□□ 0.63
UPK3B-202ENST00000334348 FTOQ9C0B1 505 aaKnown RBP eCLIP18.96■□□□□ 0.63
UPK3B-202ENST00000334348 ARGLU1Q9NWB6 273 aaPredicted RBP18.96■□□□□ 0.63
UPK3B-202ENST00000334348 NRDCO43847 1150 aa18.95■□□□□ 0.62
UPK3B-202ENST00000334348 CAPN2P17655 700 aa18.95■□□□□ 0.62
UPK3B-202ENST00000334348 SFPQP23246 707 aaKnown RBP eCLIP18.95■□□□□ 0.62
UPK3B-202ENST00000334348 HNRNPH2P55795 449 aaKnown RBP18.95■□□□□ 0.62
UPK3B-202ENST00000334348 CADPS2Q86UW7 1296 aa18.95■□□□□ 0.62
UPK3B-202ENST00000334348 FSIP1Q8NA03 581 aa18.95■□□□□ 0.62
UPK3B-202ENST00000334348 TSPYL1Q9H0U9 437 aa18.95■□□□□ 0.62
UPK3B-202ENST00000334348 TLR7Q9NYK1 1049 aaKnown RBP18.95■□□□□ 0.62
UPK3B-202ENST00000334348 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.95■□□□□ 0.62
UPK3B-202ENST00000334348 PFKFB2O60825 505 aa18.95■□□□□ 0.62
UPK3B-202ENST00000334348 ANXA1P04083 346 aa18.95■□□□□ 0.62
UPK3B-202ENST00000334348 MST1RQ04912 1400 aa18.94■□□□□ 0.62
UPK3B-202ENST00000334348 TEX35Q5T0J7 233 aa18.94■□□□□ 0.62
UPK3B-202ENST00000334348 XPO4Q9C0E2 1151 aaKnown RBP18.94■□□□□ 0.62
UPK3B-202ENST00000334348 MAP3K2Q9Y2U5 619 aa18.94■□□□□ 0.62
UPK3B-202ENST00000334348 TMCO3Q6UWJ1 677 aa18.93■□□□□ 0.62
UPK3B-202ENST00000334348 TMC6Q7Z403 805 aa18.93■□□□□ 0.62
UPK3B-202ENST00000334348 NSUN7Q8NE18 718 aaKnown RBP18.93■□□□□ 0.62
UPK3B-202ENST00000334348 ORC3Q9UBD5 711 aaPredicted RBP18.93■□□□□ 0.62
UPK3B-202ENST00000334348 PHLPP2Q6ZVD8 1323 aa18.93■□□□□ 0.62
UPK3B-202ENST00000334348 CCP110O43303 1012 aa18.93■□□□□ 0.62
UPK3B-202ENST00000334348 ME1P48163 572 aa18.93■□□□□ 0.62
UPK3B-202ENST00000334348 ETF1P62495 437 aaKnown RBP18.93■□□□□ 0.62
UPK3B-202ENST00000334348 TPM4P67936 248 aa18.93■□□□□ 0.62
UPK3B-202ENST00000334348 FMR1NBQ8N0W7 255 aaPredicted RBP18.93■□□□□ 0.62
UPK3B-202ENST00000334348 UBXN4Q92575 508 aa18.93■□□□□ 0.62
UPK3B-202ENST00000334348 DBF4Q9UBU7 674 aaPredicted RBP18.93■□□□□ 0.62
UPK3B-202ENST00000334348 U3KPZ7 1027 aaPredicted RBP18.93■□□□□ 0.62
UPK3B-202ENST00000334348 C1orf167Q5SNV9 1468 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms