RNA–Protein interactions for RNA: ENST00000330688.8

RARB-201, Transcript of retinoic acid receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARB, Length 3,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-201ENST00000330688 IL15P40933 162 aaPredicted RBP11.9□□□□□ -0.5
RARB-201ENST00000330688 KLHL34Q8N239 644 aa11.9□□□□□ -0.5
RARB-201ENST00000330688 CCDC191Q8NCU4 936 aa11.9□□□□□ -0.5
RARB-201ENST00000330688 BRF1Q92994 677 aa11.9□□□□□ -0.5
RARB-201ENST00000330688 ZNF830Q96NB3 372 aaPredicted RBP11.9□□□□□ -0.5
RARB-201ENST00000330688 PUS3Q9BZE2 481 aaKnown RBP11.9□□□□□ -0.5
RARB-201ENST00000330688 A0A0G2JLW4 131 aa11.9□□□□□ -0.51
RARB-201ENST00000330688 EYA2O00167 538 aa11.9□□□□□ -0.51
RARB-201ENST00000330688 NKX1-1Q15270 411 aaPredicted RBP11.9□□□□□ -0.51
RARB-201ENST00000330688 PALLDQ8WX93 1383 aa11.9□□□□□ -0.51
RARB-201ENST00000330688 SCRN1Q12765 414 aa11.89□□□□□ -0.51
RARB-201ENST00000330688 LEO1Q8WVC0 666 aaPredicted RBP11.89□□□□□ -0.51
RARB-201ENST00000330688 SPATA32Q96LK8 384 aa11.89□□□□□ -0.51
RARB-201ENST00000330688 SCAND2PQ9GZW5 306 aaPredicted RBP11.89□□□□□ -0.51
RARB-201ENST00000330688 HELLSQ9NRZ9 838 aa11.89□□□□□ -0.51
RARB-201ENST00000330688 HSP90B1P14625 803 aaKnown RBP11.89□□□□□ -0.51
RARB-201ENST00000330688 CAMK4Q16566 473 aa11.89□□□□□ -0.51
RARB-201ENST00000330688 ZMYM1Q5SVZ6 1142 aa11.89□□□□□ -0.51
RARB-201ENST00000330688 DDX11Q96FC9 970 aa11.89□□□□□ -0.51
RARB-201ENST00000330688 LAMB4A4D0S4 1761 aa11.88□□□□□ -0.51
RARB-201ENST00000330688 A0A1B0GUL7 405 aa11.88□□□□□ -0.51
RARB-201ENST00000330688 TERF1P54274 439 aa11.88□□□□□ -0.51
RARB-201ENST00000330688 DACT1Q9NYF0 836 aa11.88□□□□□ -0.51
RARB-201ENST00000330688 KCPQ6ZWJ8 1503 aa11.88□□□□□ -0.51
RARB-201ENST00000330688 CCDC192P0DO97 292 aa11.88□□□□□ -0.51
RARB-201ENST00000330688 HSPA2P54652 639 aa11.88□□□□□ -0.51
RARB-201ENST00000330688 RESTQ13127 1097 aa11.88□□□□□ -0.51
RARB-201ENST00000330688 DHX32Q7L7V1 743 aaKnown RBP11.88□□□□□ -0.51
RARB-201ENST00000330688 DSCC1Q9BVC3 393 aa11.88□□□□□ -0.51
RARB-201ENST00000330688 NUP62CLQ9H1M0 184 aa11.88□□□□□ -0.51
RARB-201ENST00000330688 PARP4Q9UKK3 1724 aaKnown RBP11.88□□□□□ -0.51
RARB-201ENST00000330688 IFIT1P09914 478 aaKnown RBP11.88□□□□□ -0.51
RARB-201ENST00000330688 HSPD1P10809 573 aaKnown RBP11.88□□□□□ -0.51
RARB-201ENST00000330688 IL2RBP14784 551 aa11.88□□□□□ -0.51
RARB-201ENST00000330688 PLCB2Q00722 1185 aa11.88□□□□□ -0.51
RARB-201ENST00000330688 SMARCC2Q8TAQ2 1214 aa11.88□□□□□ -0.51
RARB-201ENST00000330688 PGBD1Q96JS3 809 aa11.88□□□□□ -0.51
RARB-201ENST00000330688 TTC12Q9H892 705 aaPredicted RBP11.88□□□□□ -0.51
RARB-201ENST00000330688 PFKFB2O60825 505 aa11.87□□□□□ -0.51
RARB-201ENST00000330688 EXOSC10Q01780 885 aaKnown RBP11.87□□□□□ -0.51
RARB-201ENST00000330688 MAP3K11Q16584 847 aa11.87□□□□□ -0.51
RARB-201ENST00000330688 CIAO1O76071 339 aa11.87□□□□□ -0.51
RARB-201ENST00000330688 FGD1P98174 961 aa11.87□□□□□ -0.51
RARB-201ENST00000330688 APOBRQ0VD83 1088 aa11.87□□□□□ -0.51
RARB-201ENST00000330688 KIAA2012Q0VF49 1180 aa11.87□□□□□ -0.51
RARB-201ENST00000330688 ISCA1Q9BUE6 129 aa11.87□□□□□ -0.51
RARB-201ENST00000330688 ATG3Q9NT62 314 aa11.87□□□□□ -0.51
RARB-201ENST00000330688 MAST3O60307 1309 aa11.87□□□□□ -0.51
RARB-201ENST00000330688 GOLGA6L4A6NEF3 574 aa11.86□□□□□ -0.51
RARB-201ENST00000330688 RNF113AO15541 343 aaKnown RBP11.86□□□□□ -0.51
RARB-201ENST00000330688 CTDNEP1O95476 244 aa11.86□□□□□ -0.51
RARB-201ENST00000330688 HMGB1P09429 215 aaKnown RBP11.86□□□□□ -0.51
RARB-201ENST00000330688 CKAP2LQ8IYA6 745 aa11.86□□□□□ -0.51
RARB-201ENST00000330688 NSUN7Q8NE18 718 aaKnown RBP11.86□□□□□ -0.51
RARB-201ENST00000330688 MRVI1Q9Y6F6 885 aa11.86□□□□□ -0.51
RARB-201ENST00000330688 COL5A2P05997 1499 aaPredicted RBP11.86□□□□□ -0.51
RARB-201ENST00000330688 E7EWF7 191 aa11.86□□□□□ -0.51
RARB-201ENST00000330688 H3BQV1 296 aa11.86□□□□□ -0.51
RARB-201ENST00000330688 TYRO3Q06418 890 aa11.86□□□□□ -0.51
RARB-201ENST00000330688 IFFO2Q5TF58 517 aa11.86□□□□□ -0.51
RARB-201ENST00000330688 CARD10Q9BWT7 1032 aa11.86□□□□□ -0.51
RARB-201ENST00000330688 AGXT2Q9BYV1 514 aa11.86□□□□□ -0.51
RARB-201ENST00000330688 TCIRG1Q13488 830 aa11.85□□□□□ -0.51
RARB-201ENST00000330688 OSBP2Q969R2 916 aa11.85□□□□□ -0.51
RARB-201ENST00000330688 PKNOX2Q96KN3 472 aa11.85□□□□□ -0.51
RARB-201ENST00000330688 TNMDQ9H2S6 317 aa11.85□□□□□ -0.51
RARB-201ENST00000330688 STRN4Q9NRL3 753 aa11.85□□□□□ -0.51
RARB-201ENST00000330688 CEP126Q9P2H0 1117 aa11.85□□□□□ -0.51
RARB-201ENST00000330688 TJP1Q07157 1748 aa11.85□□□□□ -0.51
RARB-201ENST00000330688 NUP188Q5SRE5 1749 aa11.85□□□□□ -0.51
RARB-201ENST00000330688 M0R2C6 588 aa11.85□□□□□ -0.51
RARB-201ENST00000330688 NR1I2O75469 434 aa11.85□□□□□ -0.51
RARB-201ENST00000330688 CCT2P78371 535 aaKnown RBP11.85□□□□□ -0.51
RARB-201ENST00000330688 HSP90AA2PQ14568 343 aaPredicted RBP11.85□□□□□ -0.51
RARB-201ENST00000330688 TTLL5Q6EMB2 1281 aa11.85□□□□□ -0.51
RARB-201ENST00000330688 TICAM2Q86XR7 235 aa11.85□□□□□ -0.51
RARB-201ENST00000330688 LLPHQ9BRT6 129 aaKnown RBP11.85□□□□□ -0.51
RARB-201ENST00000330688 ZNF330Q9Y3S2 320 aaPredicted RBP11.85□□□□□ -0.51
RARB-201ENST00000330688 TNS2Q63HR2 1409 aa11.85□□□□□ -0.51
RARB-201ENST00000330688 ADORA1P30542 326 aa11.85□□□□□ -0.51
RARB-201ENST00000330688 ADD1P35611 737 aaKnown RBP11.85□□□□□ -0.51
RARB-201ENST00000330688 FKBP4Q02790 459 aaKnown RBP eCLIP11.85□□□□□ -0.51
RARB-201ENST00000330688 CHST3Q7LGC8 479 aa11.85□□□□□ -0.51
RARB-201ENST00000330688 FAM200AQ8TCP9 573 aa11.85□□□□□ -0.51
RARB-201ENST00000330688 CCDC85AQ96PX6 553 aaPredicted RBP11.85□□□□□ -0.51
RARB-201ENST00000330688 ZSCAN16Q9H4T2 348 aaPredicted RBP11.85□□□□□ -0.51
RARB-201ENST00000330688 SOS2Q07890 1332 aaPredicted RBP11.85□□□□□ -0.51
RARB-201ENST00000330688 UBR2Q8IWV8 1755 aa11.84□□□□□ -0.51
RARB-201ENST00000330688 RRP9O43818 475 aaKnown RBP11.84□□□□□ -0.51
RARB-201ENST00000330688 PPFIA3O75145 1194 aa11.84□□□□□ -0.51
RARB-201ENST00000330688 FOSBP53539 338 aa11.84□□□□□ -0.51
RARB-201ENST00000330688 CCDC57Q2TAC2 916 aa11.84□□□□□ -0.51
RARB-201ENST00000330688 RBM43Q6ZSC3 357 aaKnown RBP11.84□□□□□ -0.51
RARB-201ENST00000330688 C17orf53Q8N3J3 647 aaPredicted RBP11.84□□□□□ -0.51
RARB-201ENST00000330688 PIBF1Q8WXW3 757 aa11.84□□□□□ -0.51
RARB-201ENST00000330688 CLSTN2Q9H4D0 955 aa11.84□□□□□ -0.51
RARB-201ENST00000330688 NCOA5Q9HCD5 579 aaKnown RBP11.84□□□□□ -0.51
RARB-201ENST00000330688 DDX19AQ9NUU7 478 aaKnown RBP11.84□□□□□ -0.51
RARB-201ENST00000330688 PTPDC1A2A3K4 754 aa11.84□□□□□ -0.51
RARB-201ENST00000330688 LUZP1Q86V48 1076 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 476.4 ms