RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 TAF5LO75529 589 aa11.3□□□□□ -0.6
RPGR-201ENST00000318842 ILDR1Q86SU0 546 aaPredicted RBP11.3□□□□□ -0.6
RPGR-201ENST00000318842 NPHP3Q7Z494 1330 aa11.3□□□□□ -0.6
RPGR-201ENST00000318842 MYD88Q99836 296 aa11.29□□□□□ -0.6
RPGR-201ENST00000318842 XPO4Q9C0E2 1151 aaKnown RBP11.29□□□□□ -0.6
RPGR-201ENST00000318842 CLIC4Q9Y696 253 aa11.29□□□□□ -0.6
RPGR-201ENST00000318842 C3P01024 1663 aa11.29□□□□□ -0.6
RPGR-201ENST00000318842 PTPDC1A2A3K4 754 aa11.29□□□□□ -0.6
RPGR-201ENST00000318842 IGKV5-2P06315 115 aa11.29□□□□□ -0.6
RPGR-201ENST00000318842 NDUFA8P51970 172 aa11.29□□□□□ -0.6
RPGR-201ENST00000318842 TIMM10P62072 90 aa11.29□□□□□ -0.6
RPGR-201ENST00000318842 SNW1Q13573 536 aaKnown RBP11.29□□□□□ -0.6
RPGR-201ENST00000318842 E4F1Q66K89 784 aaPredicted RBP11.29□□□□□ -0.6
RPGR-201ENST00000318842 DPF2Q92785 391 aa11.29□□□□□ -0.6
RPGR-201ENST00000318842 SDF4Q9BRK5 362 aa11.29□□□□□ -0.6
RPGR-201ENST00000318842 PPP6R1Q9UPN7 881 aa11.29□□□□□ -0.6
RPGR-201ENST00000318842 ARHGEF10O15013 1369 aa11.29□□□□□ -0.6
RPGR-201ENST00000318842 ADD1P35611 737 aaKnown RBP11.29□□□□□ -0.6
RPGR-201ENST00000318842 TERF2Q15554 542 aa11.29□□□□□ -0.6
RPGR-201ENST00000318842 ARMCX5Q6P1M9 558 aa11.29□□□□□ -0.6
RPGR-201ENST00000318842 UBE3BQ7Z3V4 1068 aa11.29□□□□□ -0.6
RPGR-201ENST00000318842 OSCARQ8IYS5 282 aa11.29□□□□□ -0.6
RPGR-201ENST00000318842 ZSCAN31Q96LW9 406 aaPredicted RBP11.29□□□□□ -0.6
RPGR-201ENST00000318842 A0A0U1RQJ8 604 aa11.28□□□□□ -0.6
RPGR-201ENST00000318842 GOLIM4O00461 696 aa11.28□□□□□ -0.6
RPGR-201ENST00000318842 COBLO75128 1261 aa11.28□□□□□ -0.6
RPGR-201ENST00000318842 SKIDA1Q1XH10 827 aa11.28□□□□□ -0.6
RPGR-201ENST00000318842 CCAR2Q8N163 923 aaKnown RBP11.28□□□□□ -0.6
RPGR-201ENST00000318842 ATRIPQ8WXE1 791 aa11.28□□□□□ -0.6
RPGR-201ENST00000318842 ZNF594Q96JF6 807 aaPredicted RBP11.28□□□□□ -0.6
RPGR-201ENST00000318842 NEK1Q96PY6 1258 aa11.28□□□□□ -0.6
RPGR-201ENST00000318842 SCAND2PQ9GZW5 306 aaPredicted RBP11.28□□□□□ -0.6
RPGR-201ENST00000318842 SBNO1A3KN83 1393 aa11.28□□□□□ -0.6
RPGR-201ENST00000318842 RIC3Q7Z5B4 369 aa11.28□□□□□ -0.6
RPGR-201ENST00000318842 HOMER1Q86YM7 354 aa11.28□□□□□ -0.6
RPGR-201ENST00000318842 DNAI1Q9UI46 699 aa11.28□□□□□ -0.6
RPGR-201ENST00000318842 TMEM232C9JQI7 657 aa11.27□□□□□ -0.6
RPGR-201ENST00000318842 IRX5P78411 483 aaPredicted RBP11.27□□□□□ -0.6
RPGR-201ENST00000318842 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.27□□□□□ -0.6
RPGR-201ENST00000318842 PTPRUQ92729 1446 aa11.27□□□□□ -0.61
RPGR-201ENST00000318842 GRM8O00222 908 aa11.27□□□□□ -0.61
RPGR-201ENST00000318842 ST5P78524 1137 aa11.27□□□□□ -0.61
RPGR-201ENST00000318842 ARHGAP29Q52LW3 1261 aa11.27□□□□□ -0.61
RPGR-201ENST00000318842 PI16Q6UXB8 463 aa11.27□□□□□ -0.61
RPGR-201ENST00000318842 DDX19AQ9NUU7 478 aaKnown RBP11.27□□□□□ -0.61
RPGR-201ENST00000318842 ZNF330Q9Y3S2 320 aaPredicted RBP11.27□□□□□ -0.61
RPGR-201ENST00000318842 NRXN3Q9Y4C0 1643 aa11.27□□□□□ -0.61
RPGR-201ENST00000318842 AOX1Q06278 1338 aa11.27□□□□□ -0.61
RPGR-201ENST00000318842 GPATCH3Q96I76 525 aa11.26□□□□□ -0.61
RPGR-201ENST00000318842 NRKQ7Z2Y5 1582 aa11.26□□□□□ -0.61
RPGR-201ENST00000318842 ZNF609O15014 1411 aa11.26□□□□□ -0.61
RPGR-201ENST00000318842 FAM208AQ9UK61 1670 aaKnown RBP11.26□□□□□ -0.61
RPGR-201ENST00000318842 PLEKHG3A1L390 1219 aa11.26□□□□□ -0.61
RPGR-201ENST00000318842 ANKRD65E5RJM6 399 aa11.26□□□□□ -0.61
RPGR-201ENST00000318842 KINO60870 393 aaKnown RBP11.26□□□□□ -0.61
RPGR-201ENST00000318842 KIF20AO95235 890 aa11.26□□□□□ -0.61
RPGR-201ENST00000318842 CLCN6P51797 869 aa11.26□□□□□ -0.61
RPGR-201ENST00000318842 NSUN7Q8NE18 718 aaKnown RBP11.26□□□□□ -0.61
RPGR-201ENST00000318842 IRX2Q9BZI1 471 aaPredicted RBP11.26□□□□□ -0.61
RPGR-201ENST00000318842 INCENPQ9NQS7 918 aa11.26□□□□□ -0.61
RPGR-201ENST00000318842 PCDHA7Q9UN72 937 aa11.26□□□□□ -0.61
RPGR-201ENST00000318842 TTC41PQ6P2S7 1318 aa11.26□□□□□ -0.61
RPGR-201ENST00000318842 KDRP35968 1356 aa11.26□□□□□ -0.61
RPGR-201ENST00000318842 KCNA6P17658 529 aa11.26□□□□□ -0.61
RPGR-201ENST00000318842 NYAP1Q6ZVC0 841 aa11.26□□□□□ -0.61
RPGR-201ENST00000318842 XAGE3Q8WTP9 111 aa11.26□□□□□ -0.61
RPGR-201ENST00000318842 IL17RAQ96F46 866 aa11.26□□□□□ -0.61
RPGR-201ENST00000318842 PPP1R13BQ96KQ4 1090 aa11.26□□□□□ -0.61
RPGR-201ENST00000318842 FOXN1O15353 648 aa11.25□□□□□ -0.61
RPGR-201ENST00000318842 COPS6Q7L5N1 327 aa11.25□□□□□ -0.61
RPGR-201ENST00000318842 KRT222Q8N1A0 295 aa11.25□□□□□ -0.61
RPGR-201ENST00000318842 MON2Q7Z3U7 1717 aa11.25□□□□□ -0.61
RPGR-201ENST00000318842 PSMA5P28066 241 aa11.25□□□□□ -0.61
RPGR-201ENST00000318842 ZNF827Q17R98 1081 aa11.25□□□□□ -0.61
RPGR-201ENST00000318842 CCDC73Q6ZRK6 1079 aa11.25□□□□□ -0.61
RPGR-201ENST00000318842 DESI2Q9BSY9 194 aa11.25□□□□□ -0.61
RPGR-201ENST00000318842 RGPD8O14715 1765 aaPredicted RBP11.25□□□□□ -0.61
RPGR-201ENST00000318842 KIF28PB7ZC32 967 aa11.24□□□□□ -0.61
RPGR-201ENST00000318842 GIGYF1O75420 1035 aaPredicted RBP11.24□□□□□ -0.61
RPGR-201ENST00000318842 URI1O94763 535 aaPredicted RBP11.24□□□□□ -0.61
RPGR-201ENST00000318842 ITSN1Q15811 1721 aa11.24□□□□□ -0.61
RPGR-201ENST00000318842 CAPN2P17655 700 aa11.24□□□□□ -0.61
RPGR-201ENST00000318842 PDCP20941 246 aa11.24□□□□□ -0.61
RPGR-201ENST00000318842 GNL2Q13823 731 aaKnown RBP11.24□□□□□ -0.61
RPGR-201ENST00000318842 STX1AQ16623 288 aa11.24□□□□□ -0.61
RPGR-201ENST00000318842 CCDC82Q8N4S0 544 aa11.24□□□□□ -0.61
RPGR-201ENST00000318842 ZNF397Q8NF99 534 aaPredicted RBP11.24□□□□□ -0.61
RPGR-201ENST00000318842 DDX17Q92841 729 aaKnown RBP11.24□□□□□ -0.61
RPGR-201ENST00000318842 CHMP4CQ96CF2 233 aa11.24□□□□□ -0.61
RPGR-201ENST00000318842 CLIC6Q96NY7 704 aa11.24□□□□□ -0.61
RPGR-201ENST00000318842 MYL10Q9BUA6 226 aa11.24□□□□□ -0.61
RPGR-201ENST00000318842 TM6SF1Q9BZW5 370 aa11.24□□□□□ -0.61
RPGR-201ENST00000318842 MORC2Q9Y6X9 1032 aaPredicted RBP11.24□□□□□ -0.61
RPGR-201ENST00000318842 PXDNQ92626 1479 aa11.24□□□□□ -0.61
RPGR-201ENST00000318842 ELP1O95163 1332 aa11.24□□□□□ -0.61
RPGR-201ENST00000318842 ZC3H6P61129 1189 aaKnown RBP11.24□□□□□ -0.61
RPGR-201ENST00000318842 SF3A1Q15459 793 aaKnown RBP11.24□□□□□ -0.61
RPGR-201ENST00000318842 WWC2Q6AWC2 1192 aa11.24□□□□□ -0.61
RPGR-201ENST00000318842 KSR2Q6VAB6 950 aa11.24□□□□□ -0.61
RPGR-201ENST00000318842 HINFPQ9BQA5 517 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms