RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 PHLPP1O60346 1717 aa14.86□□□□□ -0.03
RNF4-201ENST00000314289 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.86□□□□□ -0.03
RNF4-201ENST00000314289 LTBP4Q8N2S1 1624 aa14.86□□□□□ -0.03
RNF4-201ENST00000314289 ME3Q16798 604 aa14.86□□□□□ -0.03
RNF4-201ENST00000314289 KBTBD3Q8NAB2 608 aa14.86□□□□□ -0.03
RNF4-201ENST00000314289 RBM27Q9P2N5 1060 aaKnown RBP14.86□□□□□ -0.03
RNF4-201ENST00000314289 NSFL1CQ9UNZ2 370 aaKnown RBP14.86□□□□□ -0.03
RNF4-201ENST00000314289 LOC102724428A0A0B4J2F2 783 aa14.86□□□□□ -0.03
RNF4-201ENST00000314289 SIK1P57059 783 aa14.86□□□□□ -0.03
RNF4-201ENST00000314289 TRIM28Q13263 835 aaKnown RBP14.86□□□□□ -0.03
RNF4-201ENST00000314289 METTL24Q5JXM2 366 aa14.86□□□□□ -0.03
RNF4-201ENST00000314289 CNNM1Q9NRU3 951 aa14.86□□□□□ -0.03
RNF4-201ENST00000314289 TPCN1Q9ULQ1 816 aa14.86□□□□□ -0.03
RNF4-201ENST00000314289 UBAP1LF5GYI3 381 aa14.85□□□□□ -0.03
RNF4-201ENST00000314289 BRD1O95696 1058 aa14.85□□□□□ -0.03
RNF4-201ENST00000314289 INTS5Q6P9B9 1019 aaKnown RBP14.85□□□□□ -0.03
RNF4-201ENST00000314289 INTS4Q96HW7 963 aaKnown RBP14.85□□□□□ -0.03
RNF4-201ENST00000314289 NGLY1Q96IV0 654 aa14.85□□□□□ -0.03
RNF4-201ENST00000314289 DOT1LQ8TEK3 1739 aa14.85□□□□□ -0.03
RNF4-201ENST00000314289 MCMDC2Q4G0Z9 681 aa14.85□□□□□ -0.03
RNF4-201ENST00000314289 SPATA31A5Q5VU36 1347 aa14.85□□□□□ -0.03
RNF4-201ENST00000314289 SPATA31A7Q8IWB4 1347 aa14.85□□□□□ -0.03
RNF4-201ENST00000314289 CTSWP56202 376 aa14.84□□□□□ -0.03
RNF4-201ENST00000314289 TTC39AQ5SRH9 613 aa14.84□□□□□ -0.03
RNF4-201ENST00000314289 CLEC17AQ6ZS10 378 aa14.84□□□□□ -0.03
RNF4-201ENST00000314289 PLCH1Q4KWH8 1693 aa14.84□□□□□ -0.03
RNF4-201ENST00000314289 TOM1O60784 492 aa14.84□□□□□ -0.03
RNF4-201ENST00000314289 CSF1RP07333 972 aa14.84□□□□□ -0.03
RNF4-201ENST00000314289 ST3GAL1Q11201 340 aa14.84□□□□□ -0.03
RNF4-201ENST00000314289 BLOC1S2Q6QNY1 142 aa14.84□□□□□ -0.03
RNF4-201ENST00000314289 SMC3Q9UQE7 1217 aa14.84□□□□□ -0.03
RNF4-201ENST00000314289 IL6STP40189 918 aaPredicted RBP14.84□□□□□ -0.03
RNF4-201ENST00000314289 SUSD4Q5VX71 490 aa14.84□□□□□ -0.03
RNF4-201ENST00000314289 GPT2Q8TD30 523 aa14.84□□□□□ -0.03
RNF4-201ENST00000314289 CIAO1O76071 339 aa14.83□□□□□ -0.04
RNF4-201ENST00000314289 CYP21A2P08686 494 aa14.83□□□□□ -0.04
RNF4-201ENST00000314289 RNF20Q5VTR2 975 aa14.83□□□□□ -0.04
RNF4-201ENST00000314289 CCDC87Q9NVE4 849 aa14.83□□□□□ -0.04
RNF4-201ENST00000314289 PPFIA3O75145 1194 aa14.83□□□□□ -0.04
RNF4-201ENST00000314289 ZAP70P43403 619 aa14.83□□□□□ -0.04
RNF4-201ENST00000314289 SKOR2Q2VWA4 1001 aaPredicted RBP14.83□□□□□ -0.04
RNF4-201ENST00000314289 CCDC158Q5M9N0 1113 aa14.83□□□□□ -0.04
RNF4-201ENST00000314289 GOLGB1Q14789 3259 aaKnown RBP14.83□□□□□ -0.04
RNF4-201ENST00000314289 SYT1P21579 422 aa14.82□□□□□ -0.04
RNF4-201ENST00000314289 GJB2P29033 226 aa14.82□□□□□ -0.04
RNF4-201ENST00000314289 KCNB2Q92953 911 aa14.82□□□□□ -0.04
RNF4-201ENST00000314289 SEC31BQ9NQW1 1179 aa14.82□□□□□ -0.04
RNF4-201ENST00000314289 RPAP1Q9BWH6 1393 aaPredicted RBP14.82□□□□□ -0.04
RNF4-201ENST00000314289 ANKRD18BA2A2Z9 1011 aa14.82□□□□□ -0.04
RNF4-201ENST00000314289 EIF5P55010 431 aaKnown RBP14.82□□□□□ -0.04
RNF4-201ENST00000314289 ATP2B3Q16720 1220 aa14.82□□□□□ -0.04
RNF4-201ENST00000314289 WASHC4Q2M389 1173 aa14.82□□□□□ -0.04
RNF4-201ENST00000314289 TTLL5Q6EMB2 1281 aa14.82□□□□□ -0.04
RNF4-201ENST00000314289 COL22A1Q8NFW1 1626 aaPredicted RBP14.82□□□□□ -0.04
RNF4-201ENST00000314289 KLHL40Q2TBA0 621 aa14.81□□□□□ -0.04
RNF4-201ENST00000314289 CHST3Q7LGC8 479 aa14.81□□□□□ -0.04
RNF4-201ENST00000314289 GPR108Q9NPR9 543 aa14.81□□□□□ -0.04
RNF4-201ENST00000314289 M0R2C6 588 aa14.81□□□□□ -0.04
RNF4-201ENST00000314289 RRP9O43818 475 aaKnown RBP14.81□□□□□ -0.04
RNF4-201ENST00000314289 PKNOX2Q96KN3 472 aa14.81□□□□□ -0.04
RNF4-201ENST00000314289 TM6SF1Q9BZW5 370 aa14.81□□□□□ -0.04
RNF4-201ENST00000314289 ISY1Q9ULR0 285 aaKnown RBP14.81□□□□□ -0.04
RNF4-201ENST00000314289 RIPOR2Q9Y4F9 1068 aa14.81□□□□□ -0.04
RNF4-201ENST00000314289 TCHHQ07283 1943 aa14.81□□□□□ -0.04
RNF4-201ENST00000314289 PALLDQ8WX93 1383 aa14.81□□□□□ -0.04
RNF4-201ENST00000314289 RPS6KB1P23443 525 aa14.81□□□□□ -0.04
RNF4-201ENST00000314289 BICDL1Q6ZP65 573 aa14.81□□□□□ -0.04
RNF4-201ENST00000314289 OSBP2Q969R2 916 aa14.81□□□□□ -0.04
RNF4-201ENST00000314289 LRP6O75581 1613 aa14.81□□□□□ -0.04
RNF4-201ENST00000314289 NUP98P52948 1817 aa14.81□□□□□ -0.04
RNF4-201ENST00000314289 VPS37CA5D8V6 355 aaPredicted RBP14.8□□□□□ -0.04
RNF4-201ENST00000314289 MAST3O60307 1309 aa14.8□□□□□ -0.04
RNF4-201ENST00000314289 PSMA5P28066 241 aa14.8□□□□□ -0.04
RNF4-201ENST00000314289 TOB2Q14106 344 aaPredicted RBP14.8□□□□□ -0.04
RNF4-201ENST00000314289 STOX1Q6ZVD7 989 aa14.8□□□□□ -0.04
RNF4-201ENST00000314289 CDCA7Q9BWT1 371 aaPredicted RBP14.8□□□□□ -0.04
RNF4-201ENST00000314289 PLA2G12BQ9BX93 195 aa14.8□□□□□ -0.04
RNF4-201ENST00000314289 NIP7Q9Y221 180 aaKnown RBP eCLIP14.8□□□□□ -0.04
RNF4-201ENST00000314289 THRAP3Q9Y2W1 955 aaKnown RBP14.8□□□□□ -0.04
RNF4-201ENST00000314289 HAND2P61296 217 aa14.8□□□□□ -0.04
RNF4-201ENST00000314289 ZNF34Q8IZ26 560 aa14.8□□□□□ -0.04
RNF4-201ENST00000314289 AKAP2Q9Y2D5 859 aa14.8□□□□□ -0.04
RNF4-201ENST00000314289 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.8□□□□□ -0.04
RNF4-201ENST00000314289 STX6O43752 255 aa14.79□□□□□ -0.04
RNF4-201ENST00000314289 PDE8AO60658 829 aa14.79□□□□□ -0.04
RNF4-201ENST00000314289 GADD45BO75293 160 aaPredicted RBP14.79□□□□□ -0.04
RNF4-201ENST00000314289 NEK1Q96PY6 1258 aa14.79□□□□□ -0.04
RNF4-201ENST00000314289 SLIT2O94813 1529 aa14.79□□□□□ -0.04
RNF4-201ENST00000314289 MYH14Q7Z406 1995 aaKnown RBP14.79□□□□□ -0.04
RNF4-201ENST00000314289 RNF113AO15541 343 aaKnown RBP14.79□□□□□ -0.04
RNF4-201ENST00000314289 MCAMP43121 646 aa14.79□□□□□ -0.04
RNF4-201ENST00000314289 FERMT3Q86UX7 667 aa14.79□□□□□ -0.04
RNF4-201ENST00000314289 CNPY2Q9Y2B0 182 aa14.79□□□□□ -0.04
RNF4-201ENST00000314289 RIC1Q4ADV7 1423 aa14.79□□□□□ -0.04
RNF4-201ENST00000314289 CDHR2Q9BYE9 1310 aa14.79□□□□□ -0.04
RNF4-201ENST00000314289 WDR33Q9C0J8 1336 aaKnown RBP14.79□□□□□ -0.04
RNF4-201ENST00000314289 HSPD1P10809 573 aaKnown RBP14.79□□□□□ -0.04
RNF4-201ENST00000314289 FGD1P98174 961 aa14.79□□□□□ -0.04
RNF4-201ENST00000314289 NAP1L2Q9ULW6 460 aaPredicted RBP14.79□□□□□ -0.04
RNF4-201ENST00000314289 ERVV-1B6SEH8 477 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms