RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ZNF445P59923 1031 aa26.16■■□□□ 1.78
TPM4-201ENST00000300933 PI16Q6UXB8 463 aa26.16■■□□□ 1.78
TPM4-201ENST00000300933 KBTBD3Q8NAB2 608 aa26.16■■□□□ 1.78
TPM4-201ENST00000300933 PCCAP05165 728 aaPredicted RBP26.15■■□□□ 1.78
TPM4-201ENST00000300933 SYT1P21579 422 aa26.15■■□□□ 1.78
TPM4-201ENST00000300933 GORABQ5T7V8 394 aa26.15■■□□□ 1.78
TPM4-201ENST00000300933 IFIT5Q13325 482 aaKnown RBP26.15■■□□□ 1.78
TPM4-201ENST00000300933 BLOC1S2Q6QNY1 142 aa26.15■■□□□ 1.78
TPM4-201ENST00000300933 LRRC2Q9BYS8 371 aa26.15■■□□□ 1.78
TPM4-201ENST00000300933 TRMT112Q9UI30 125 aaKnown RBP26.15■■□□□ 1.78
TPM4-201ENST00000300933 GJB2P29033 226 aa26.14■■□□□ 1.78
TPM4-201ENST00000300933 DDB1Q16531 1140 aa26.14■■□□□ 1.78
TPM4-201ENST00000300933 MCMDC2Q4G0Z9 681 aa26.14■■□□□ 1.78
TPM4-201ENST00000300933 TM6SF1Q9BZW5 370 aa26.14■■□□□ 1.78
TPM4-201ENST00000300933 SCARF1Q14162 830 aa26.14■■□□□ 1.77
TPM4-201ENST00000300933 HSP90AB3PQ58FF7 597 aa26.14■■□□□ 1.77
TPM4-201ENST00000300933 DZIP3Q86Y13 1208 aaKnown RBP26.13■■□□□ 1.77
TPM4-201ENST00000300933 GADD45BO75293 160 aaPredicted RBP26.13■■□□□ 1.77
TPM4-201ENST00000300933 RNF20Q5VTR2 975 aa26.13■■□□□ 1.77
TPM4-201ENST00000300933 TRIM28Q13263 835 aaKnown RBP26.12■■□□□ 1.77
TPM4-201ENST00000300933 XAGE2Q96GT9 111 aa26.12■■□□□ 1.77
TPM4-201ENST00000300933 ITGA6P23229 1130 aa26.12■■□□□ 1.77
TPM4-201ENST00000300933 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.12■■□□□ 1.77
TPM4-201ENST00000300933 TCHHQ07283 1943 aa26.12■■□□□ 1.77
TPM4-201ENST00000300933 CYP21A2P08686 494 aa26.11■■□□□ 1.77
TPM4-201ENST00000300933 MARCH10Q8NA82 808 aaPredicted RBP26.11■■□□□ 1.77
TPM4-201ENST00000300933 TTLL11Q8NHH1 800 aa26.11■■□□□ 1.77
TPM4-201ENST00000300933 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.11■■□□□ 1.77
TPM4-201ENST00000300933 TMEM63CQ9P1W3 806 aa26.11■■□□□ 1.77
TPM4-201ENST00000300933 WDR33Q9C0J8 1336 aaKnown RBP26.11■■□□□ 1.77
TPM4-201ENST00000300933 STX6O43752 255 aa26.11■■□□□ 1.77
TPM4-201ENST00000300933 KCNQ4P56696 695 aa26.11■■□□□ 1.77
TPM4-201ENST00000300933 LDHAL6AQ6ZMR3 332 aa26.11■■□□□ 1.77
TPM4-201ENST00000300933 NOL7Q9UMY1 257 aaKnown RBP26.11■■□□□ 1.77
TPM4-201ENST00000300933 COL16A1Q07092 1604 aaPredicted RBP26.11■■□□□ 1.77
TPM4-201ENST00000300933 IRS4O14654 1257 aaPredicted RBP26.11■■□□□ 1.77
TPM4-201ENST00000300933 RPS6KB1P23443 525 aa26.1■■□□□ 1.77
TPM4-201ENST00000300933 PSMA5P28066 241 aa26.1■■□□□ 1.77
TPM4-201ENST00000300933 CNPY2Q9Y2B0 182 aa26.1■■□□□ 1.77
TPM4-201ENST00000300933 KCNQ2O43526 872 aa26.1■■□□□ 1.77
TPM4-201ENST00000300933 CIAO1O76071 339 aa26.1■■□□□ 1.77
TPM4-201ENST00000300933 TOB2Q14106 344 aaPredicted RBP26.1■■□□□ 1.77
TPM4-201ENST00000300933 COL14A1Q05707 1796 aaKnown RBP26.1■■□□□ 1.77
TPM4-201ENST00000300933 SPATA31A1Q5TZJ5 1347 aa26.09■■□□□ 1.77
TPM4-201ENST00000300933 UBN2Q6ZU65 1347 aa26.09■■□□□ 1.77
TPM4-201ENST00000300933 CSF1RP07333 972 aa26.09■■□□□ 1.77
TPM4-201ENST00000300933 ATP6V1AP38606 617 aa26.09■■□□□ 1.77
TPM4-201ENST00000300933 USP48Q86UV5 1035 aa26.09■■□□□ 1.77
TPM4-201ENST00000300933 HELBQ8NG08 1087 aaPredicted RBP26.09■■□□□ 1.77
TPM4-201ENST00000300933 UQCRHLA0A096LP55 91 aa26.09■■□□□ 1.77
TPM4-201ENST00000300933 UQCRHP07919 91 aa26.09■■□□□ 1.77
TPM4-201ENST00000300933 METTL24Q5JXM2 366 aa26.09■■□□□ 1.77
TPM4-201ENST00000300933 TTC39AQ5SRH9 613 aa26.09■■□□□ 1.77
TPM4-201ENST00000300933 GPR108Q9NPR9 543 aa26.09■■□□□ 1.77
TPM4-201ENST00000300933 VPS37CA5D8V6 355 aaPredicted RBP26.08■■□□□ 1.77
TPM4-201ENST00000300933 HCLS1P14317 486 aaPredicted RBP26.08■■□□□ 1.77
TPM4-201ENST00000300933 SNAP23O00161 211 aa26.08■■□□□ 1.76
TPM4-201ENST00000300933 ZSCAN22P10073 491 aaPredicted RBP26.08■■□□□ 1.76
TPM4-201ENST00000300933 CNNM1Q9NRU3 951 aa26.07■■□□□ 1.76
TPM4-201ENST00000300933 USPL1Q5W0Q7 1092 aa26.07■■□□□ 1.76
TPM4-201ENST00000300933 STOX1Q6ZVD7 989 aa26.07■■□□□ 1.76
TPM4-201ENST00000300933 SMIM5Q71RC9 77 aa26.07■■□□□ 1.76
TPM4-201ENST00000300933 SYCE3A1L190 88 aa26.06■■□□□ 1.76
TPM4-201ENST00000300933 ZAP70P43403 619 aa26.06■■□□□ 1.76
TPM4-201ENST00000300933 PPFIA3O75145 1194 aa26.06■■□□□ 1.76
TPM4-201ENST00000300933 CTSWP56202 376 aa26.06■■□□□ 1.76
TPM4-201ENST00000300933 CCDC158Q5M9N0 1113 aa26.06■■□□□ 1.76
TPM4-201ENST00000300933 TTLL5Q6EMB2 1281 aa26.06■■□□□ 1.76
TPM4-201ENST00000300933 NEK1Q96PY6 1258 aa26.06■■□□□ 1.76
TPM4-201ENST00000300933 M0R2C6 588 aa26.05■■□□□ 1.76
TPM4-201ENST00000300933 CHST3Q7LGC8 479 aa26.05■■□□□ 1.76
TPM4-201ENST00000300933 FERMT3Q86UX7 667 aa26.05■■□□□ 1.76
TPM4-201ENST00000300933 PDLIM2Q96JY6 352 aa26.05■■□□□ 1.76
TPM4-201ENST00000300933 ZSCAN31Q96LW9 406 aaPredicted RBP26.05■■□□□ 1.76
TPM4-201ENST00000300933 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.05■■□□□ 1.76
TPM4-201ENST00000300933 WASHC4Q2M389 1173 aa26.05■■□□□ 1.76
TPM4-201ENST00000300933 OSBP2Q969R2 916 aa26.05■■□□□ 1.76
TPM4-201ENST00000300933 SH2B1Q9NRF2 756 aaPredicted RBP26.05■■□□□ 1.76
TPM4-201ENST00000300933 ZNF500O60304 480 aaPredicted RBP26.04■■□□□ 1.76
TPM4-201ENST00000300933 CRKLP46109 303 aaKnown RBP26.04■■□□□ 1.76
TPM4-201ENST00000300933 ITPK1Q13572 414 aa26.04■■□□□ 1.76
TPM4-201ENST00000300933 HS1BP3Q53T59 392 aa26.04■■□□□ 1.76
TPM4-201ENST00000300933 FAM173BQ6P4H8 233 aa26.04■■□□□ 1.76
TPM4-201ENST00000300933 INTS5Q6P9B9 1019 aaKnown RBP26.04■■□□□ 1.76
TPM4-201ENST00000300933 RNF214Q8ND24 703 aa26.04■■□□□ 1.76
TPM4-201ENST00000300933 RIPOR2Q9Y4F9 1068 aa26.04■■□□□ 1.76
TPM4-201ENST00000300933 MAST3O60307 1309 aa26.04■■□□□ 1.76
TPM4-201ENST00000300933 FIBPO43427 364 aa26.04■■□□□ 1.76
TPM4-201ENST00000300933 TERF1P54274 439 aa26.03■■□□□ 1.76
TPM4-201ENST00000300933 ATP2B3Q16720 1220 aa26.03■■□□□ 1.76
TPM4-201ENST00000300933 ZMYM1Q5SVZ6 1142 aa26.03■■□□□ 1.76
TPM4-201ENST00000300933 Q6ZUG5 572 aa26.03■■□□□ 1.76
TPM4-201ENST00000300933 PLA2G12BQ9BX93 195 aa26.03■■□□□ 1.76
TPM4-201ENST00000300933 HMG20BQ9P0W2 317 aa26.03■■□□□ 1.76
TPM4-201ENST00000300933 U3KPZ7 1027 aaPredicted RBP26.03■■□□□ 1.76
TPM4-201ENST00000300933 RNF113AO15541 343 aaKnown RBP26.03■■□□□ 1.76
TPM4-201ENST00000300933 HSPD1P10809 573 aaKnown RBP26.03■■□□□ 1.76
TPM4-201ENST00000300933 MTMR6Q9Y217 621 aa26.03■■□□□ 1.76
TPM4-201ENST00000300933 JCADQ9P266 1359 aa26.03■■□□□ 1.76
TPM4-201ENST00000300933 ANKRD18BA2A2Z9 1011 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms